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Experiment Chicken_E3_anterior_slice_1, section s29.

Sample reads: 124,239. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3090.28 24876.66
2. MT-ATP6 MT-ATP6 1402.78 11292.34
3. MDK ENSGALG00000008367 1226.85 9876.11 midkine [Source:NCBI gene;Acc:423196]
4. gga-mir-3533 ENSGALG00000027736 1141.21 9186.71 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
5. ENSGALG00000018384 ENSGALG00000018384 1131.95 9112.16
6. RPLP0 ENSGALG00000023294 1042.83 8394.75 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
7. RPLP1 ENSGALG00000030878 1030.09 8292.19 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
8. RPL4 ENSGALG00000007711 946.76 7621.39 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
9. MT-ND5 MT-ND5 907.41 7304.62
10. EEF1A EEF1A 895.83 7211.40
11. RPL35A ENSGALG00000007611, ENSGALG00000041230 868.06 6987.86 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
12. RPS10 ENSGALG00000002813 868.06 6987.86 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
13. RPS8 ENSGALG00000010124 810.19 6522.00 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
14. ENSGALG00000018386 ENSGALG00000018386 732.64 5897.73
15. MT-CYB MT-CYB 717.59 5776.58
16. RPS23 ENSGALG00000015617 703.70 5664.76 ribosomal protein S23
17. GAPDH ENSGALG00000014442 680.56 5478.49 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
18. RPS12 ENSGALG00000013990 664.35 5348.00 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
19. RPS28 ENSGALG00000024398 664.35 5348.00 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
20. gga-mir-3527 gga-mir-3527 652.78 5254.86
21. RPL13 ENSGALG00000006179 651.62 5245.52 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
22. RPS15 ENSGALG00000015195 615.74 4956.69 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
23. RPL27A ENSGALG00000005948 607.64 4891.48 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
24. RPL23A ENSGALG00000003966 605.32 4872.81 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
25. RPL27 ENSGALG00000002837 582.18 4686.53 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
26. RPL7A ENSGALG00000003197 582.18 4686.53 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
27. RPL26 RPL26 572.92 4611.99
28. RPSA 554.40 4462.90 ribosomal protein SA
29. RPL8 ENSGALG00000016232 533.57 4295.22 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
30. RPL32 ENSGALG00000027142 520.83 4192.67 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
31. TMSB4X ENSGALG00000026383 517.36 4164.73 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
32. RPL15 ENSGALG00000011290 503.47 4052.92 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
33. RPL29 ENSGALG00000026978 501.16 4034.32 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
34. RPS4 RPS4 497.69 4006.39
35. MT-CO1 MT-CO1 489.58 3941.10
36. RPL21 ENSGALG00000027035 486.11 3913.17 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
37. RPS21 ENSGALG00000005338 481.48 3875.90 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
38. MT-ND4 MT-ND4 480.32 3866.56
39. RPS2 ENSGALG00000005490 474.54 3820.03 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
40. RPL19 ENSGALG00000001658 471.07 3792.10 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
41. RPS3A ENSGALG00000010077 466.44 3754.83 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
42. RPS29 ENSGALG00000012229 465.28 3745.49 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
43. RPS15A ENSGALG00000006771 452.55 3643.01 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
44. RPS16 ENSGALG00000026490 424.77 3419.39 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
45. GNB2L1 ENSGALG00000000122 400.46 3223.69 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
46. RPL36 ENSGALG00000000474 395.83 3186.42 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
47. RPS11 ENSGALG00000017299 388.89 3130.55 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
48. RPS6 ENSGALG00000015082 384.26 3093.28 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
49. RPL36AL ENSGALG00000004952 383.10 3083.94 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
50. RPL6 ENSGALG00000004818 381.94 3074.61 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
51. RPL24 ENSGALG00000015339 379.63 3056.01 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
52. SNRPD1 ENSGALG00000041334 378.47 3046.67 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
53. MT-ND6 MT-ND6 377.32 3037.41
54. PPIA ENSGALG00000028600 376.16 3028.08 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
55. RPS27A ENSGALG00000036790 366.90 2953.53 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
56. ENSGALG00000002696 ENSGALG00000002696 363.43 2925.60
57. RPL35 ENSGALG00000035677 363.43 2925.60 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
58. RPL12 ENSGALG00000008806 359.95 2897.59 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
59. HBZ ENSGALG00000023740 358.80 2888.33 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
60. RPL14 ENSGALG00000043379 356.48 2869.65 ribosomal protein L14
61. RPL38 ENSGALG00000001465 349.54 2813.79 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
62. RPL5 ENSGALG00000005922 349.54 2813.79 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
63. RPS14 ENSGALG00000004588 342.59 2757.84 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
64. HBG1 HBG1 339.12 2729.91
65. RPS7 ENSGALG00000016392 336.81 2711.31 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
66. NME2 ENSGALG00000002932 324.07 2608.75 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
67. CRHOA CRHOA 320.60 2580.82
68. MT-ND1 MT-ND1 318.29 2562.22
69. TCEB3 ENSGALG00000034625 312.50 2515.62 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
70. RPL18A 297.45 2394.46 ribosomal protein L18a
71. MT-ND3 MT-ND3 291.67 2347.93
72. ENSGALG00000028992 ENSGALG00000028992 287.04 2310.66
73. TXN ENSGALG00000015704 285.88 2301.33 thioredoxin [Source:NCBI gene;Acc:396437]
74. ENO1 ENSGALG00000002377 280.09 2254.72 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
75. ANP32B ENSGALG00000037483 277.78 2236.12 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
76. RPS25 ENSGALG00000007699 276.62 2226.78 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
77. CIRBP ENSGALG00000030918 274.31 2208.19 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
78. AKAP12 ENSGALG00000036240 270.83 2180.17 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
79. RPS20 ENSGALG00000014432 266.20 2142.90 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
80. RPL10A ENSGALG00000002644 262.73 2114.97 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
81. RPLP2 ENSGALG00000034811 254.63 2049.76 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
82. HBE 251.16 2021.83 hemoglobin subunit epsilon
83. RPS13 ENSGALG00000006096 247.69 1993.90 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
84. ENSGALG00000028649 ENSGALG00000028649 246.53 1984.56
85. RPL31 ENSGALG00000016775 246.53 1984.56 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
86. RPL7 ENSGALG00000035252 244.21 1965.88 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
87. NUCKS1 ENSGALG00000000708 239.58 1928.61 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:NCBI gene;Acc:404775]
88. STMN1 ENSGALG00000001475 239.58 1928.61 stathmin 1 [Source:NCBI gene;Acc:396057]
89. RPL23 ENSGALG00000001634 233.80 1882.08 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
90. HMGN5 ENSGALG00000007131 229.17 1844.81 high mobility group nucleosome binding domain 5, transcript variant X1
91. UBB ENSGALG00000004509 229.17 1844.81 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
92. RAN ENSGALG00000002569 225.69 1816.80 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
93. RPL37 ENSGALG00000014833 224.54 1807.54 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
94. RPS17 ENSGALG00000002157 222.22 1788.86 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
95. HMGN2 HMGN2 217.59 1751.59
96. PRDX1 ENSGALG00000010243 217.59 1751.59 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
97. H3-IX H3-IX 211.81 1705.06
98. MYL12A ENSGALG00000014854 211.81 1705.06 myosin, light chain 12A, regulatory, non-sarcomeric [Source:NCBI gene;Acc:396284]
99. EEF1D 209.49 1686.39 eukaryotic translation elongation factor 1 delta, transcript variant X13
100. SET ENSGALG00000004701 203.70 1639.78 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA