Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_anterior_slice_1, section s27.

Sample reads: 124,238. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3396.68 27341.56
2. EEF1A EEF1A 1416.56 11402.60
3. RPLP1 ENSGALG00000030878 1204.59 9696.34 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
4. gga-mir-3533 ENSGALG00000027736 1134.78 9134.41 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
5. RPS10 ENSGALG00000002813 996.02 8017.46 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
6. ENSGALG00000018384 ENSGALG00000018384 966.22 7777.58
7. RPLP0 ENSGALG00000023294 938.98 7558.32 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
8. MDK ENSGALG00000008367 927.06 7462.37 midkine [Source:NCBI gene;Acc:423196]
9. RPL35A ENSGALG00000007611, ENSGALG00000041230 913.44 7352.73 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
10. MT-ATP6 MT-ATP6 900.67 7249.94
11. RPL4 ENSGALG00000007711 827.46 6660.64 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
12. RPS23 ENSGALG00000015617 794.26 6393.39 ribosomal protein S23
13. RPS8 ENSGALG00000010124 779.79 6276.92 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
14. RPS28 ENSGALG00000024398 738.93 5948.01 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
15. RPS12 ENSGALG00000013990 679.34 5468.35 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
16. MT-ND5 MT-ND5 669.97 5392.92
17. RPL32 ENSGALG00000027142 668.27 5379.24 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
18. gga-mir-3527 gga-mir-3527 641.03 5159.97
19. GAPDH ENSGALG00000014442 617.19 4968.07 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
20. RPSA 612.08 4926.94 ribosomal protein SA
21. RPS6 ENSGALG00000015082 595.06 4789.93 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
22. RPL27A ENSGALG00000005948 585.69 4714.51 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
23. RPS11 ENSGALG00000017299 585.69 4714.51 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
24. RPL7A ENSGALG00000003197 560.15 4508.93 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
25. RPL8 ENSGALG00000016232 559.30 4502.08 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
26. RPL26 RPL26 546.53 4399.29
27. RPS4 RPS4 520.14 4186.87
28. RPL23A ENSGALG00000003966 517.59 4166.34 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
29. RPL19 ENSGALG00000001658 509.93 4104.68 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
30. RPL27 ENSGALG00000002837 509.08 4097.84 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
31. RPL29 ENSGALG00000026978 505.67 4070.39 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
32. RPL15 ENSGALG00000011290 504.82 4063.55 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
33. RPL13 ENSGALG00000006179 492.90 3967.60 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
34. RPS2 ENSGALG00000005490 492.05 3960.75 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
35. RPL38 ENSGALG00000001465 491.20 3953.91 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
36. RPS21 ENSGALG00000005338 489.50 3940.23 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
37. MT-CYB MT-CYB 486.09 3912.78
38. GNB2L1 ENSGALG00000000122 481.83 3878.49 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
39. RPS15 ENSGALG00000015195 477.58 3844.28 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
40. RPL36AL ENSGALG00000004952 470.77 3789.46 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
41. RPL21 ENSGALG00000027035 467.36 3762.01 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
42. RPS3A ENSGALG00000010077 460.55 3707.20 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
43. RPS29 ENSGALG00000012229 455.44 3666.06 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
44. RPS15A ENSGALG00000006771 445.23 3583.88 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
45. RPL14 ENSGALG00000043379 435.86 3508.45 ribosomal protein L14
46. RPS27A ENSGALG00000036790 433.31 3487.93 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
47. PPIA ENSGALG00000028600 430.76 3467.40 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
48. MT-CO1 MT-CO1 418.84 3371.45
49. MT-ND4 MT-ND4 415.43 3344.00
50. HBG1 HBG1 413.73 3330.32
51. RPL5 ENSGALG00000005922 412.03 3316.63 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
52. MT-ND6 MT-ND6 410.33 3302.95
53. RPL35 ENSGALG00000035677 410.33 3302.95 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
54. RPL6 ENSGALG00000004818 410.33 3302.95 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
55. RPL24 ENSGALG00000015339 408.62 3289.19 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
56. RPLP2 ENSGALG00000034811 408.62 3289.19 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
57. RPL12 ENSGALG00000008806 403.52 3248.13 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
58. RPS14 ENSGALG00000004588 375.42 3021.94 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
59. TMSB4X ENSGALG00000026383 372.02 2994.57 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
60. RPS7 ENSGALG00000016392 368.61 2967.12 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
61. TCEB3 ENSGALG00000034625 362.65 2919.15 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
62. HBZ ENSGALG00000023740 359.25 2891.78 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
63. RPS20 ENSGALG00000014432 355.84 2864.33 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
64. RPS16 ENSGALG00000026490 347.33 2795.83 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
65. TXN ENSGALG00000015704 337.11 2713.57 thioredoxin [Source:NCBI gene;Acc:396437]
66. ENSGALG00000018386 ENSGALG00000018386 336.26 2706.72
67. MT-ND3 MT-ND3 333.71 2686.20
68. NME2 ENSGALG00000002932 331.15 2665.59 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
69. SNRPD1 ENSGALG00000041334 326.90 2631.38 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
70. RPL23 ENSGALG00000001634 325.20 2617.70 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
71. ENSGALG00000002696 ENSGALG00000002696 318.39 2562.88
72. RPL36 ENSGALG00000000474 310.72 2501.14 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
73. ENSGALG00000028992 ENSGALG00000028992 308.17 2480.61
74. RPS25 ENSGALG00000007699 303.06 2439.48 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
75. RPS13 ENSGALG00000006096 302.21 2432.64 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
76. HBE 298.81 2405.27 hemoglobin subunit epsilon
77. RPL18A 296.25 2384.66 ribosomal protein L18a
78. EEF1D 292.00 2350.45 eukaryotic translation elongation factor 1 delta, transcript variant X13
79. ANP32B ENSGALG00000037483 286.04 2302.48 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
80. ENO1 ENSGALG00000002377 282.63 2275.03 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
81. ENSGALG00000028649 ENSGALG00000028649 282.63 2275.03
82. CIRBP ENSGALG00000030918 280.08 2254.50 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
83. STMN1 ENSGALG00000001475 262.20 2110.58 stathmin 1 [Source:NCBI gene;Acc:396057]
84. RPL37 ENSGALG00000014833 258.79 2083.13 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
85. AKAP12 ENSGALG00000036240 257.09 2069.45 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
86. UBB ENSGALG00000004509 254.54 2048.92 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
87. RPL10A ENSGALG00000002644 252.84 2035.23 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
88. CRHOA CRHOA 246.88 1987.26
89. HMGN2 HMGN2 235.81 1898.15
90. FTH FTH 234.96 1891.31
91. RPL7 ENSGALG00000035252 232.40 1870.70 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
92. NUCKS1 ENSGALG00000000708 226.45 1822.81 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:NCBI gene;Acc:404775]
93. ALDOC ENSGALG00000026077 223.89 1802.20 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
94. RPL31 ENSGALG00000016775 214.53 1726.86 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
95. RAN ENSGALG00000002569 211.12 1699.41 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
96. EIF5A2 ENSGALG00000009309 207.72 1672.04 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
97. SLC25A6_1 ENSGALG00000016691 205.16 1651.43 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
98. RPL3 ENSGALG00000012172 204.31 1644.59 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
99. HMGN5 ENSGALG00000007131 200.05 1610.30 high mobility group nucleosome binding domain 5, transcript variant X1
100. PRDX1 ENSGALG00000010243 198.35 1596.62 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA