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Experiment Chicken_E3_anterior_slice_1, section s26.

Sample reads: 124,240. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3440.82 27698.94
2. RPLP1 ENSGALG00000030878 1126.65 9069.64 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
3. gga-mir-3533 ENSGALG00000027736 1106.01 8903.49 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
4. ENSGALG00000018384 ENSGALG00000018384 1102.92 8878.61
5. RPS23 ENSGALG00000015617 1044.11 8405.19 ribosomal protein S23
6. EEF1A EEF1A 1026.57 8263.99
7. RPLP0 ENSGALG00000023294 1011.10 8139.45 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
8. MT-ATP6 MT-ATP6 958.48 7715.86
9. RPS10 ENSGALG00000002813 949.19 7641.07 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
10. RPL35A ENSGALG00000007611, ENSGALG00000041230 864.59 6960.03 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
11. RPS8 ENSGALG00000010124 831.57 6694.22 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
12. RPL4 ENSGALG00000007711 801.65 6453.36 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
13. MT-ND5 MT-ND5 774.83 6237.46
14. GAPDH ENSGALG00000014442 734.59 5913.52 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
15. RPL8 ENSGALG00000016232 731.50 5888.65 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
16. MDK ENSGALG00000008367 702.61 5656.08 midkine [Source:NCBI gene;Acc:423196]
17. RPS28 ENSGALG00000024398 691.26 5564.71 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
18. RPS12 ENSGALG00000013990 690.23 5556.42 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
19. RPL13 ENSGALG00000006179 673.72 5423.51 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
20. RPS11 ENSGALG00000017299 656.18 5282.31 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
21. RPSA 656.18 5282.31 ribosomal protein SA
22. gga-mir-3527 gga-mir-3527 614.91 4950.09
23. RPL23A ENSGALG00000003966 609.75 4908.55 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
24. RPL27A ENSGALG00000005948 591.18 4759.06 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
25. RPL32 ENSGALG00000027142 586.02 4717.52 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
26. MT-CYB MT-CYB 584.99 4709.23
27. RPS6 ENSGALG00000015082 580.86 4675.98 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
28. RPL26 RPL26 563.32 4534.78
29. RPS15 ENSGALG00000015195 560.23 4509.91 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
30. RPL7A ENSGALG00000003197 557.13 4484.95 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
31. RPL15 ENSGALG00000011290 550.94 4435.12 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
32. TMSB4X ENSGALG00000026383 545.79 4393.66 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
33. RPS3A ENSGALG00000010077 535.47 4310.59 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
34. RPL27 ENSGALG00000002837 532.37 4285.63 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
35. RPS2 ENSGALG00000005490 525.15 4227.51 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
36. RPL29 ENSGALG00000026978 503.48 4053.06 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
37. GNB2L1 ENSGALG00000000122 480.79 3870.41 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
38. RPL21 ENSGALG00000027035 479.75 3862.03 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
39. RPS21 ENSGALG00000005338 479.75 3862.03 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
40. RPL19 ENSGALG00000001658 478.72 3853.74 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
41. RPS16 ENSGALG00000026490 477.69 3845.45 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
42. RPL36AL ENSGALG00000004952 475.63 3828.87 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
43. RPS4 RPS4 462.22 3720.92
44. RPL38 ENSGALG00000001465 460.15 3704.25 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
45. PPIA ENSGALG00000028600 458.09 3687.67 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
46. MT-CO1 MT-CO1 452.93 3646.13
47. RPS15A ENSGALG00000006771 441.58 3554.76 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
48. RPS29 ENSGALG00000012229 428.17 3446.81 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
49. RPL6 ENSGALG00000004818 427.14 3438.52 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
50. RPL14 ENSGALG00000043379 420.95 3388.69 ribosomal protein L14
51. MT-ND4 MT-ND4 403.41 3247.49
52. RPS14 ENSGALG00000004588 401.34 3230.83 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
53. RPL35 ENSGALG00000035677 399.28 3214.24 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
54. RPL36 ENSGALG00000000474 392.06 3156.12 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
55. RPL24 ENSGALG00000015339 389.99 3139.46 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
56. RPL5 ENSGALG00000005922 375.55 3023.21 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
57. MT-ND3 MT-ND3 369.36 2973.38
58. SNRPD1 ENSGALG00000041334 368.33 2965.09 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
59. RPS27A ENSGALG00000036790 365.23 2940.14 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
60. RPS25 ENSGALG00000007699 362.14 2915.26 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
61. NME2 ENSGALG00000002932 360.07 2898.60 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
62. RPL12 ENSGALG00000008806 359.04 2890.31 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
63. RPS7 ENSGALG00000016392 353.88 2848.77 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
64. ENSGALG00000018386 ENSGALG00000018386 340.47 2740.82
65. HBG1 HBG1 340.47 2740.82
66. MT-ND6 MT-ND6 338.41 2724.23
67. RPLP2 ENSGALG00000034811 337.38 2715.94 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
68. EEF1D 331.19 2666.11 eukaryotic translation elongation factor 1 delta, transcript variant X13
69. RPL23 ENSGALG00000001634 318.80 2566.37 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
70. TCEB3 ENSGALG00000034625 317.77 2558.08 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
71. ANP32B ENSGALG00000037483 316.74 2549.79 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
72. ENSGALG00000028992 ENSGALG00000028992 312.61 2516.54
73. RPL37 ENSGALG00000014833 312.61 2516.54 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
74. RPL18A 308.49 2483.37 ribosomal protein L18a
75. ENSGALG00000002696 ENSGALG00000002696 301.27 2425.25
76. TXN ENSGALG00000015704 298.17 2400.30 thioredoxin [Source:NCBI gene;Acc:396437]
77. RPS13 ENSGALG00000006096 296.11 2383.71 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
78. HBZ ENSGALG00000023740 289.92 2333.88 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
79. CIRBP ENSGALG00000030918 285.79 2300.64 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
80. RPS20 ENSGALG00000014432 283.73 2284.05 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
81. MT-ND1 MT-ND1 275.47 2217.56
82. ENO1 ENSGALG00000002377 268.25 2159.44 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
83. RPL37A ENSGALG00000011472 266.19 2142.86 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
84. RPL10A ENSGALG00000002644 256.90 2068.07 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
85. UBB ENSGALG00000004509 256.90 2068.07 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
86. RPL31 ENSGALG00000016775 246.58 1984.99 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
87. EIF5A2 ENSGALG00000009309 240.39 1935.16 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
88. HBE 240.39 1935.16 hemoglobin subunit epsilon
89. CRHOA CRHOA 239.36 1926.87
90. RPL7 ENSGALG00000035252 238.33 1918.58 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
91. RAN ENSGALG00000002569 232.14 1868.75 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
92. STMN1 ENSGALG00000001475 232.14 1868.75 stathmin 1 [Source:NCBI gene;Acc:396057]
93. PRDX1 ENSGALG00000010243 229.04 1843.79 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
94. ENSGALG00000028649 ENSGALG00000028649 228.01 1835.50
95. AKAP12 ENSGALG00000036240 221.82 1785.67 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
96. RPS17 ENSGALG00000002157 213.57 1719.26 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
97. RPS3 ENSGALG00000017330 212.54 1710.97 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
98. HMGN2 HMGN2 207.38 1669.43
99. H3-IX H3-IX 205.31 1652.77
100. FTH FTH 203.25 1636.18
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA