Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_anterior_slice_1, section s20.

Sample reads: 124,246. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3753.97 30217.51
2. RPLP1 ENSGALG00000030878 1360.43 10950.76 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
3. MT-ATP6 MT-ATP6 1044.27 8405.83
4. RPLP0 ENSGALG00000023294 1015.44 8173.77 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
5. ENSGALG00000018384 ENSGALG00000018384 983.82 7919.24
6. RPL35A ENSGALG00000007611, ENSGALG00000041230 983.82 7919.24 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
7. RPS23 ENSGALG00000015617 982.90 7911.83 ribosomal protein S23
8. RPS10 ENSGALG00000002813 973.60 7836.97 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
9. EEF1A EEF1A 953.14 7672.28
10. gga-mir-3533 ENSGALG00000027736 917.80 7387.81 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
11. RPS28 ENSGALG00000024398 878.75 7073.48 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
12. RPS8 ENSGALG00000010124 864.80 6961.19 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
13. RPL4 ENSGALG00000007711 835.97 6729.12 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
14. PPIA ENSGALG00000028600 787.62 6339.93 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
15. ENSGALG00000018386 ENSGALG00000018386 756.93 6092.89
16. RPS12 ENSGALG00000013990 752.28 6055.46 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
17. GAPDH ENSGALG00000014442 742.98 5980.60 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
18. RPL32 ENSGALG00000027142 731.82 5890.77 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
19. RPS15 ENSGALG00000015195 683.47 5501.58 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
20. RPL27A ENSGALG00000005948 682.54 5494.09 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
21. MT-ND5 MT-ND5 675.10 5434.20
22. gga-mir-3527 gga-mir-3527 665.80 5359.34
23. RPL29 ENSGALG00000026978 663.94 5344.37 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
24. RPS11 ENSGALG00000017299 653.71 5262.03 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
25. RPL7A ENSGALG00000003197 649.99 5232.08 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
26. RPL23A ENSGALG00000003966 649.06 5224.60 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
27. RPL38 ENSGALG00000001465 641.62 5164.71 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
28. MT-CYB MT-CYB 610.94 4917.75
29. RPS21 ENSGALG00000005338 605.36 4872.83 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
30. RPL13 ENSGALG00000006179 599.78 4827.92 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
31. RPL26 RPL26 593.27 4775.52
32. RPS29 ENSGALG00000012229 581.18 4678.20 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
33. RPL15 ENSGALG00000011290 579.32 4663.23 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
34. RPS15A ENSGALG00000006771 571.88 4603.34 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
35. RPL8 ENSGALG00000016232 570.02 4588.37 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
36. RPS2 ENSGALG00000005490 570.02 4588.37 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
37. RPL21 ENSGALG00000027035 563.51 4535.96 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
38. RPL27 ENSGALG00000002837 554.22 4461.18 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
39. RPL19 ENSGALG00000001658 543.99 4378.84 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
40. GNB2L1 ENSGALG00000000122 527.25 4244.09 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
41. RPSA 525.39 4229.12 ribosomal protein SA
42. RPS3A ENSGALG00000010077 521.67 4199.17 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
43. RPL24 ENSGALG00000015339 510.51 4109.34 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
44. RPL14 ENSGALG00000043379 509.58 4101.85 ribosomal protein L14
45. RPL35 ENSGALG00000035677 496.56 3997.05 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
46. TMSB4X ENSGALG00000026383 488.19 3929.68 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
47. NME2 ENSGALG00000002932 483.54 3892.25 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
48. RPS6 ENSGALG00000015082 480.75 3869.79 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
49. RPS16 ENSGALG00000026490 475.17 3824.87 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
50. RPL36AL ENSGALG00000004952 464.02 3735.12 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
51. RPL6 ENSGALG00000004818 461.23 3712.66 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
52. RPS27A ENSGALG00000036790 456.58 3675.23 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
53. MT-ND4 MT-ND4 450.07 3622.83
54. SNRPD1 ENSGALG00000041334 450.07 3622.83 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
55. RPS4 RPS4 440.77 3547.97
56. MT-ND3 MT-ND3 423.10 3405.74
57. TCEB3 ENSGALG00000034625 411.01 3308.42 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
58. RPS7 ENSGALG00000016392 408.22 3285.96 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
59. RPL12 ENSGALG00000008806 400.78 3226.07 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
60. RPL36 ENSGALG00000000474 397.99 3203.61 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
61. RPL18A 397.06 3196.13 ribosomal protein L18a
62. ENSGALG00000002696 ENSGALG00000002696 379.40 3053.97
63. MDK ENSGALG00000008367 378.47 3046.49 midkine [Source:NCBI gene;Acc:423196]
64. MT-CO1 MT-CO1 372.89 3001.57
65. RPS14 ENSGALG00000004588 369.17 2971.63 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
66. RPL5 ENSGALG00000005922 367.31 2956.65 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
67. RPS13 ENSGALG00000006096 364.52 2934.20 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
68. RPS20 ENSGALG00000014432 364.52 2934.20 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
69. RPLP2 ENSGALG00000034811 359.87 2896.77 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
70. RPL23 ENSGALG00000001634 358.94 2889.28 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
71. RPL37 ENSGALG00000014833 358.01 2881.79 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
72. ENSGALG00000028992 ENSGALG00000028992 353.36 2844.36
73. RPS25 ENSGALG00000007699 348.71 2806.93 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
74. MT-ND6 MT-ND6 343.13 2762.02
75. RPL37A ENSGALG00000011472 331.04 2664.70 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
76. EEF1D 330.11 2657.21 eukaryotic translation elongation factor 1 delta, transcript variant X13
77. TXN ENSGALG00000015704 293.85 2365.34 thioredoxin [Source:NCBI gene;Acc:396437]
78. UBB ENSGALG00000004509 290.13 2335.40 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
79. RAN ENSGALG00000002569 277.11 2230.59 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
80. HMGN2 HMGN2 275.25 2215.62
81. RPL7 ENSGALG00000035252 272.46 2193.16 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
82. ANP32B ENSGALG00000037483 265.95 2140.76 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
83. CIRBP ENSGALG00000030918 262.23 2110.82 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
84. ENO1 ENSGALG00000002377 261.30 2103.33 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
85. EIF5A2 ENSGALG00000009309 257.58 2073.39 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
86. RPL10A ENSGALG00000002644 256.65 2065.90 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
87. PRDX1 ENSGALG00000010243 255.72 2058.41 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
88. STMN1 ENSGALG00000001475 255.72 2058.41 stathmin 1 [Source:NCBI gene;Acc:396057]
89. RPL31 ENSGALG00000016775 252.00 2028.47 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
90. ENSGALG00000028649 ENSGALG00000028649 246.42 1983.55
91. MT-ND1 MT-ND1 243.63 1961.10
92. HMGN5 ENSGALG00000007131 238.05 1916.18 high mobility group nucleosome binding domain 5, transcript variant X1
93. RPS17 ENSGALG00000002157 235.26 1893.72 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
94. LDHB ENSGALG00000035836 233.40 1878.75 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
95. AKAP12 ENSGALG00000036240 222.24 1788.92 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
96. CRHOA CRHOA 221.31 1781.43
97. SLC25A6_1 ENSGALG00000016691 216.66 1744.00 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
98. H3-IX H3-IX 215.73 1736.51
99. RPL3 ENSGALG00000012172 213.87 1721.54 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
100. ATP5G3 205.51 1654.25 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA