Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_anterior_slice_1, section s18.

Sample reads: 124,247. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3318.13 26706.86
2. MT-ATP6 MT-ATP6 1226.24 9869.72
3. RPLP1 ENSGALG00000030878 1215.63 9784.33 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
4. RPLP0 ENSGALG00000023294 1138.74 9165.46 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
5. RPL35A ENSGALG00000007611, ENSGALG00000041230 1048.60 8439.94 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
6. RPL4 ENSGALG00000007711 1028.71 8279.85 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
7. RPS10 ENSGALG00000002813 990.27 7970.46 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
8. gga-mir-3533 ENSGALG00000027736 969.06 7799.74 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
9. RPS28 ENSGALG00000024398 938.57 7554.33 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
10. EEF1A EEF1A 917.36 7383.62
11. RPS23 ENSGALG00000015617 844.45 6796.78 ribosomal protein S23
12. RPS8 ENSGALG00000010124 824.56 6636.69 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
13. MT-ND5 MT-ND5 808.65 6508.64
14. ENSGALG00000018384 ENSGALG00000018384 758.28 6103.22
15. GAPDH ENSGALG00000014442 751.65 6049.86 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
16. RPS12 ENSGALG00000013990 738.39 5943.13 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
17. gga-mir-3527 gga-mir-3527 715.86 5761.79
18. MT-CYB MT-CYB 690.67 5559.04
19. RPL13 ENSGALG00000006179 674.76 5430.99 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
20. RPL27A ENSGALG00000005948 666.81 5367.00 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
21. RPL23A ENSGALG00000003966 640.29 5153.55 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
22. RPS15 ENSGALG00000015195 638.97 5142.92 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
23. RPL15 ENSGALG00000011290 629.69 5068.23 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
24. RPL32 ENSGALG00000027142 615.11 4950.88 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
25. RPSA 604.50 4865.48 ribosomal protein SA
26. RPS2 ENSGALG00000005490 588.59 4737.43 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
27. RPL8 ENSGALG00000016232 574.01 4620.07 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
28. PPIA ENSGALG00000028600 563.41 4534.76 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
29. RPL7A ENSGALG00000003197 556.78 4481.39 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
30. RPL26 RPL26 555.45 4470.69
31. RPL19 ENSGALG00000001658 551.47 4438.66 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
32. RPS21 ENSGALG00000005338 542.20 4364.04 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
33. RPL27 ENSGALG00000002837 535.57 4310.68 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
34. RPL29 ENSGALG00000026978 530.26 4267.94 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
35. RPS29 ENSGALG00000012229 507.73 4086.60 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
36. RPS15A ENSGALG00000006771 505.08 4065.27 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
37. RPS3A ENSGALG00000010077 505.08 4065.27 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
38. RPS11 ENSGALG00000017299 490.49 3947.84 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
39. SNRPD1 ENSGALG00000041334 483.87 3894.56 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
40. MDK ENSGALG00000008367 471.94 3798.54 midkine [Source:NCBI gene;Acc:423196]
41. RPL38 ENSGALG00000001465 458.68 3691.81 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
42. RPL36AL ENSGALG00000004952 456.03 3670.48 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
43. RPL24 ENSGALG00000015339 454.70 3659.78 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
44. RPS6 ENSGALG00000015082 450.72 3627.74 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
45. RPS4 RPS4 442.77 3563.75
46. NME2 ENSGALG00000002932 437.47 3521.10 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
47. RPL35 ENSGALG00000035677 428.19 3446.40 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
48. MT-ND4 MT-ND4 422.89 3403.74
49. RPL14 ENSGALG00000043379 417.58 3361.01 ribosomal protein L14
50. TMSB4X ENSGALG00000026383 412.28 3318.35 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
51. MT-ND6 MT-ND6 409.63 3297.02
52. RPL36 ENSGALG00000000474 408.30 3286.31 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
53. RPL21 ENSGALG00000027035 403.00 3243.65 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
54. RPL18A 392.40 3158.34 ribosomal protein L18a
55. ENSGALG00000018386 ENSGALG00000018386 391.07 3147.63
56. RPL12 ENSGALG00000008806 389.74 3136.93 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
57. RPS14 ENSGALG00000004588 389.74 3136.93 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
58. RPS7 ENSGALG00000016392 384.44 3094.27 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
59. GNB2L1 ENSGALG00000000122 383.12 3083.64 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
60. RPS16 ENSGALG00000026490 381.79 3072.94 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
61. MT-CO1 MT-CO1 371.18 2987.54
62. RPS27A ENSGALG00000036790 369.86 2976.92 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
63. RPL5 ENSGALG00000005922 359.25 2891.52 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
64. ENSGALG00000028992 ENSGALG00000028992 356.60 2870.19
65. RPS13 ENSGALG00000006096 353.95 2848.86 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
66. TXN ENSGALG00000015704 353.95 2848.86 thioredoxin [Source:NCBI gene;Acc:396437]
67. RPS20 ENSGALG00000014432 347.32 2795.50 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
68. AKAP12 ENSGALG00000036240 344.67 2774.17 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
69. RPL6 ENSGALG00000004818 334.07 2688.85 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
70. ANP32B ENSGALG00000037483 328.76 2646.11 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
71. TCEB3 ENSGALG00000034625 327.44 2635.49 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
72. ENSGALG00000002696 ENSGALG00000002696 320.81 2582.13
73. RPL23 ENSGALG00000001634 304.90 2454.07 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
74. HMGN2 HMGN2 303.58 2443.45
75. RPLP2 ENSGALG00000034811 298.27 2400.71 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
76. CIRBP ENSGALG00000030918 292.97 2358.05 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
77. ENO1 ENSGALG00000002377 288.99 2326.01 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
78. MT-ND1 MT-ND1 282.37 2272.73
79. RPS25 ENSGALG00000007699 282.37 2272.73 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
80. HMGN5 ENSGALG00000007131 281.04 2262.03 high mobility group nucleosome binding domain 5, transcript variant X1
81. MT-ND3 MT-ND3 274.41 2208.66
82. RAN ENSGALG00000002569 259.83 2091.31 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
83. STMN1 ENSGALG00000001475 246.57 1984.59 stathmin 1 [Source:NCBI gene;Acc:396057]
84. RPL37 ENSGALG00000014833 245.25 1973.96 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
85. EEF1D 242.60 1952.63 eukaryotic translation elongation factor 1 delta, transcript variant X13
86. EIF5A2 ENSGALG00000009309 241.27 1941.93 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
87. RPL7 ENSGALG00000035252 238.62 1920.60 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
88. RPL10A ENSGALG00000002644 235.97 1899.27 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
89. ENSGALG00000022570 ENSGALG00000022570 233.32 1877.94
90. ENSGALG00000028649 ENSGALG00000028649 229.34 1845.90
91. H3-IX H3-IX 218.73 1760.51
92. RPL31 ENSGALG00000016775 216.08 1739.18 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
93. CRHOA CRHOA 214.76 1728.55
94. ATP5G3 210.78 1696.52 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
95. UBB ENSGALG00000004509 208.13 1675.19 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
96. RPL37A ENSGALG00000011472 205.48 1653.86 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
97. PKM ENSGALG00000001992 204.15 1643.16 pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
98. PHB2 ENSGALG00000014567 201.50 1621.83 prohibitin 2 [Source:NCBI gene;Acc:771124]
99. LDHB ENSGALG00000035836 198.85 1600.50 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
100. CHCHD2 ENSGALG00000002495 196.20 1579.17 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:417544]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA