Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_anterior_slice_1, section s15.

Sample reads: 124,244. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 2790.62 22461.50
2. RPLP1 ENSGALG00000030878 1190.12 9579.19 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
3. RPLP0 ENSGALG00000023294 1125.96 9062.77 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
4. EEF1A EEF1A 1010.93 8136.90
5. RPL35A ENSGALG00000007611, ENSGALG00000041230 996.48 8020.59 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
6. gga-mir-3533 ENSGALG00000027736 912.10 7341.43 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
7. RPL4 ENSGALG00000007711 883.20 7108.81 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
8. MT-ATP6 MT-ATP6 870.48 7006.43
9. RPS10 ENSGALG00000002813 858.92 6913.38 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
10. RPS8 ENSGALG00000010124 853.14 6866.86 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
11. ENSGALG00000018384 ENSGALG00000018384 835.22 6722.62
12. RPS28 ENSGALG00000024398 795.92 6406.30 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
13. RPS23 ENSGALG00000015617 777.42 6257.40 ribosomal protein S23
14. gga-mir-3527 gga-mir-3527 696.50 5606.08
15. GAPDH ENSGALG00000014442 678.58 5461.84 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
16. RPL23A ENSGALG00000003966 663.55 5340.87 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
17. RPL27 ENSGALG00000002837 647.37 5210.63 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
18. RPL27A ENSGALG00000005948 639.28 5145.52 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
19. RPS11 ENSGALG00000017299 635.23 5112.92 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
20. RPL38 ENSGALG00000001465 626.56 5043.14 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
21. RPL32 ENSGALG00000027142 609.22 4903.57 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
22. RPS12 ENSGALG00000013990 600.55 4833.78 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
23. PPIA ENSGALG00000028600 580.90 4675.62 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
24. MDK ENSGALG00000008367 577.43 4647.69 midkine [Source:NCBI gene;Acc:423196]
25. RPS21 ENSGALG00000005338 577.43 4647.69 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
26. MT-ND5 MT-ND5 575.70 4633.77
27. RPSA 571.65 4601.17 ribosomal protein SA
28. RPS29 ENSGALG00000012229 565.29 4549.98 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
29. RPL29 ENSGALG00000026978 557.78 4489.53 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
30. RPL14 ENSGALG00000043379 552.57 4447.60 ribosomal protein L14
31. RPL7A ENSGALG00000003197 548.53 4415.08 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
32. RPL26 RPL26 543.90 4377.81
33. RPL8 ENSGALG00000016232 536.39 4317.36 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
34. RPL15 ENSGALG00000011290 529.45 4261.50 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
35. MT-CYB MT-CYB 523.10 4210.39
36. RPS2 ENSGALG00000005490 511.54 4117.35 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
37. RPL13 ENSGALG00000006179 505.18 4066.16 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
38. RPS15 ENSGALG00000015195 496.51 3996.37 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
39. RPS15A ENSGALG00000006771 495.93 3991.70 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
40. RPS6 ENSGALG00000015082 495.93 3991.70 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
41. RPL19 ENSGALG00000001658 484.95 3903.33 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
42. RPS4 RPS4 464.72 3740.50
43. RPL24 ENSGALG00000015339 445.07 3582.34 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
44. RPL35 ENSGALG00000035677 440.44 3545.07 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
45. RPL36 ENSGALG00000000474 428.30 3447.36 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
46. RPL21 ENSGALG00000027035 425.99 3428.76 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
47. RPS16 ENSGALG00000026490 419.63 3377.57 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
48. RPL36AL ENSGALG00000004952 416.17 3349.72 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
49. RPL12 ENSGALG00000008806 412.12 3317.12 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
50. TMSB4X ENSGALG00000026383 404.61 3256.68 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
51. GNB2L1 ENSGALG00000000122 401.14 3228.75 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
52. MT-ND4 MT-ND4 398.82 3210.07
53. RPS7 ENSGALG00000016392 398.82 3210.07 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
54. RPS27A ENSGALG00000036790 394.78 3177.56 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
55. RPL18A 387.26 3117.03 ribosomal protein L18a
56. SNRPD1 ENSGALG00000041334 386.69 3112.44 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
57. RPS3A ENSGALG00000010077 386.11 3107.77 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
58. RPL5 ENSGALG00000005922 378.02 3042.66 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
59. RPS20 ENSGALG00000014432 372.24 2996.13 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
60. MT-ND6 MT-ND6 362.41 2917.01
61. RPL6 ENSGALG00000004818 360.68 2903.09 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
62. RPS25 ENSGALG00000007699 356.05 2865.82 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
63. MT-CO1 MT-CO1 349.69 2814.63
64. NME2 ENSGALG00000002932 338.13 2721.58 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
65. RPS13 ENSGALG00000006096 336.40 2707.66 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
66. RPL37A ENSGALG00000011472 332.93 2679.73 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
67. RPS14 ENSGALG00000004588 331.78 2670.47 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
68. ENSGALG00000028992 ENSGALG00000028992 327.15 2633.21
69. RPL37 ENSGALG00000014833 321.37 2586.68 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
70. RPLP2 ENSGALG00000034811 319.64 2572.76 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
71. MT-ND3 MT-ND3 318.48 2563.42
72. ENSGALG00000002696 ENSGALG00000002696 317.33 2554.17
73. TCEB3 ENSGALG00000034625 309.81 2493.64 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
74. ALDOC ENSGALG00000026077 309.23 2488.97 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
75. AKAP12 ENSGALG00000036240 304.03 2447.12 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
76. RPL23 ENSGALG00000001634 295.94 2382.00 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
77. ENSGALG00000018386 ENSGALG00000018386 293.63 2363.41
78. CIRBP ENSGALG00000030918 292.47 2354.07 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
79. TXN ENSGALG00000015704 290.74 2340.14 thioredoxin [Source:NCBI gene;Acc:396437]
80. HMGN5 ENSGALG00000007131 285.54 2298.29 high mobility group nucleosome binding domain 5, transcript variant X1
81. EEF1D 279.18 2247.10 eukaryotic translation elongation factor 1 delta, transcript variant X13
82. ENO1 ENSGALG00000002377 268.20 2158.72 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
83. RAN ENSGALG00000002569 261.84 2107.53 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
84. RPL7 ENSGALG00000035252 250.86 2019.15 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
85. ENSGALG00000028649 ENSGALG00000028649 249.12 2005.15
86. ANP32B ENSGALG00000037483 239.29 1926.03 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
87. NUCKS1 ENSGALG00000000708 235.25 1893.51 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:NCBI gene;Acc:404775]
88. EIF5A2 ENSGALG00000009309 232.94 1874.92 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
89. PRDX1 ENSGALG00000010243 232.94 1874.92 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
90. LDHB ENSGALG00000035836 231.20 1860.91 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
91. CRHOA CRHOA 228.31 1837.65
92. UBB ENSGALG00000004509 221.38 1781.87 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
93. RPL10A ENSGALG00000002644 219.06 1763.20 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
94. MT-ND1 MT-ND1 216.75 1744.60
95. RPL31 ENSGALG00000016775 215.02 1730.68 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
96. RPS17 ENSGALG00000002157 215.02 1730.68 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
97. RPL3 ENSGALG00000012172 214.44 1726.01 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
98. STMN1 ENSGALG00000001475 213.86 1721.34 stathmin 1 [Source:NCBI gene;Acc:396057]
99. HMGN2 HMGN2 210.97 1698.08
100. SET ENSGALG00000004701 200.57 1614.37 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA