Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_anterior_slice_1, section s12.

Sample reads: 124,236. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 2690.28 21655.87
2. RPLP0 ENSGALG00000023294 1285.91 10351.15 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
3. RPL35A ENSGALG00000007611, ENSGALG00000041230 1107.91 8918.31 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
4. RPLP1 ENSGALG00000030878 1079.12 8686.56 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
5. MT-ATP6 MT-ATP6 996.67 8022.87
6. RPS23 ENSGALG00000015617 994.05 8001.78 ribosomal protein S23
7. EEF1A EEF1A 992.74 7991.23
8. RPS10 ENSGALG00000002813 950.20 7648.80 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
9. RPL4 ENSGALG00000007711 947.58 7627.71 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
10. gga-mir-3533 ENSGALG00000027736 902.43 7264.27 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
11. RPS12 ENSGALG00000013990 808.20 6505.75 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
12. RPS28 ENSGALG00000024398 795.76 6405.61 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
13. GAPDH ENSGALG00000014442 788.56 6347.65 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
14. RPS8 ENSGALG00000010124 737.52 5936.79 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
15. MT-ND5 MT-ND5 736.86 5931.48
16. RPS15 ENSGALG00000015195 717.23 5773.47 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
17. RPL13 ENSGALG00000006179 708.07 5699.73 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
18. RPL27 ENSGALG00000002837 698.25 5620.68 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
19. RPL23A ENSGALG00000003966 694.33 5589.13 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
20. RPL27A ENSGALG00000005948 694.33 5589.13 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
21. RPL7A ENSGALG00000003197 691.71 5568.04 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
22. RPL8 ENSGALG00000016232 628.23 5057.05 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
23. RPS2 ENSGALG00000005490 620.38 4993.86 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
24. RPS15A ENSGALG00000006771 597.48 4809.52 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
25. RPL26 RPL26 590.93 4756.79
26. RPSA 581.12 4677.83 ribosomal protein SA
27. PPIA ENSGALG00000028600 569.34 4583.00 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
28. gga-mir-3527 gga-mir-3527 564.10 4540.82
29. RPL29 ENSGALG00000026978 558.87 4498.72 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
30. RPS29 ENSGALG00000012229 553.63 4456.54 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
31. TMSB4X ENSGALG00000026383 547.09 4403.90 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
32. MT-CYB MT-CYB 543.16 4372.26
33. RPL32 ENSGALG00000027142 541.20 4356.48 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
34. RPL35 ENSGALG00000035677 534.65 4303.76 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
35. SNRPD1 ENSGALG00000041334 534.65 4303.76 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
36. RPS21 ENSGALG00000005338 510.44 4108.88 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
37. RPL15 ENSGALG00000011290 507.82 4087.78 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
38. RPL19 ENSGALG00000001658 501.28 4035.14 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
39. RPS3A ENSGALG00000010077 497.35 4003.50 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
40. RPS16 ENSGALG00000026490 465.94 3750.66 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
41. RPS4 RPS4 462.01 3719.03
42. RPS11 ENSGALG00000017299 460.05 3703.25 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
43. RPS27A ENSGALG00000036790 458.09 3687.47 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
44. MT-ND4 MT-ND4 452.85 3645.29
45. RPL24 ENSGALG00000015339 440.42 3545.24 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
46. RPL38 ENSGALG00000001465 440.42 3545.24 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
47. RPS6 ENSGALG00000015082 437.80 3524.15 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
48. RPL36 ENSGALG00000000474 429.95 3460.96 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
49. RPL14 ENSGALG00000043379 422.75 3403.00 ribosomal protein L14
50. RPL21 ENSGALG00000027035 418.82 3371.36 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
51. RAN ENSGALG00000002569 394.61 3176.48 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
52. RPL36AL ENSGALG00000004952 393.95 3171.17 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
53. GNB2L1 ENSGALG00000000122 386.76 3113.29 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
54. MT-CO1 MT-CO1 382.18 3076.42
55. RPL5 ENSGALG00000005922 380.87 3065.88 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
56. NME2 ENSGALG00000002932 373.01 3002.61 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
57. MDK ENSGALG00000008367 371.70 2992.06 midkine [Source:NCBI gene;Acc:423196]
58. RPL12 ENSGALG00000008806 368.43 2965.74 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
59. RPS7 ENSGALG00000016392 368.43 2965.74 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
60. TXN ENSGALG00000015704 365.81 2944.65 thioredoxin [Source:NCBI gene;Acc:396437]
61. RPS14 ENSGALG00000004588 365.16 2939.42 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
62. RPL6 ENSGALG00000004818 361.89 2913.10 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
63. RPLP2 ENSGALG00000034811 360.58 2902.55 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
64. TCEB3 ENSGALG00000034625 349.45 2812.96 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
65. ANP32B ENSGALG00000037483 348.15 2802.49 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
66. CIRBP ENSGALG00000030918 338.33 2723.45 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
67. RPS20 ENSGALG00000014432 336.37 2707.67 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
68. RPL18A 328.51 2644.40 ribosomal protein L18a
69. ENO1 ENSGALG00000002377 327.86 2639.17 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
70. RPS13 ENSGALG00000006096 319.35 2570.66 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
71. MT-ND3 MT-ND3 318.70 2565.43
72. EIF5A2 ENSGALG00000009309 315.43 2539.11 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
73. ALDOC ENSGALG00000026077 313.46 2523.25 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
74. ENSGALG00000028992 ENSGALG00000028992 307.57 2475.84
75. STMN1 ENSGALG00000001475 306.26 2465.29 stathmin 1 [Source:NCBI gene;Acc:396057]
76. RPS25 ENSGALG00000007699 304.95 2454.75 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
77. RPL23 ENSGALG00000001634 295.14 2375.78 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
78. ENSGALG00000018384 ENSGALG00000018384 291.87 2349.46
79. HMGN2 HMGN2 285.32 2296.73
80. RPL37A ENSGALG00000011472 282.70 2275.64 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
81. RPL37 ENSGALG00000014833 279.43 2249.32 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
82. UBB ENSGALG00000004509 276.16 2223.00 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
83. RPL31 ENSGALG00000016775 265.69 2138.72 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
84. RPL7 ENSGALG00000035252 265.04 2133.49 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
85. HMGN5 ENSGALG00000007131 259.15 2086.07 high mobility group nucleosome binding domain 5, transcript variant X1
86. ENSGALG00000028649 ENSGALG00000028649 258.49 2080.76
87. MT-ND1 MT-ND1 257.84 2075.53
88. PRDX1 ENSGALG00000010243 253.26 2038.66 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
89. RPL10A ENSGALG00000002644 251.29 2022.80 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
90. MT-ND6 MT-ND6 250.64 2017.57
91. LDHB ENSGALG00000035836 243.44 1959.61 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
92. ENSGALG00000002696 ENSGALG00000002696 233.62 1880.56
93. CRHOA CRHOA 225.77 1817.37
94. RPS17 ENSGALG00000002157 225.12 1812.14 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
95. EEF1D 222.50 1791.05 eukaryotic translation elongation factor 1 delta, transcript variant X13
96. HSP90AB1 ENSGALG00000010175 219.88 1769.96 heat shock protein 90 alpha family class B member 1 [Source:NCBI gene;Acc:396188]
97. ATP5G3 217.26 1748.87 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
98. HSPA8 ENSGALG00000006512 215.96 1738.41 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
99. PHB2 ENSGALG00000014567 212.03 1706.77 prohibitin 2 [Source:NCBI gene;Acc:771124]
100. CHCHD2 ENSGALG00000002495 206.14 1659.36 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:417544]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA