Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_anterior_slice_1, section s11.

Sample reads: 124,247. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 2504.20 20156.83
2. RPLP0 ENSGALG00000023294 1369.51 11023.47 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
3. RPLP1 ENSGALG00000030878 1135.15 9137.06 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
4. RPL35A ENSGALG00000007611, ENSGALG00000041230 1030.89 8297.85 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
5. MT-ATP6 MT-ATP6 1016.80 8184.44
6. RPL4 ENSGALG00000007711 998.48 8036.98 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
7. gga-mir-3533 ENSGALG00000027736 990.50 7972.74 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
8. RPS10 ENSGALG00000002813 927.10 7462.42 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
9. RPS8 ENSGALG00000010124 855.24 6884.01 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
10. RPS28 ENSGALG00000024398 850.54 6846.18 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
11. RPS23 ENSGALG00000015617 844.44 6797.08 ribosomal protein S23
12. EEF1A EEF1A 788.55 6347.20
13. RPL23A ENSGALG00000003966 755.67 6082.55 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
14. RPS12 ENSGALG00000013990 750.04 6037.23 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
15. MT-ND5 MT-ND5 746.28 6006.96
16. RPS15 ENSGALG00000015195 742.52 5976.70 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
17. GAPDH ENSGALG00000014442 718.57 5783.92 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
18. RPL13 ENSGALG00000006179 714.81 5753.66 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
19. RPL27A ENSGALG00000005948 678.18 5458.81 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
20. TMSB4X ENSGALG00000026383 644.37 5186.67 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
21. RPL27 ENSGALG00000002837 643.90 5182.89 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
22. RPL7A ENSGALG00000003197 634.97 5111.01 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
23. gga-mir-3527 gga-mir-3527 619.00 4982.46
24. RPSA 606.79 4884.18 ribosomal protein SA
25. PPIA ENSGALG00000028600 584.25 4702.75 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
26. RPS21 ENSGALG00000005338 583.31 4695.18 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
27. RPL32 ENSGALG00000027142 572.98 4612.04 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
28. RPL8 ENSGALG00000016232 565.46 4551.51 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
29. RPS2 ENSGALG00000005490 556.07 4475.92 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
30. RPS15A ENSGALG00000006771 535.88 4313.41 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
31. RPS29 ENSGALG00000012229 534.94 4305.84 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
32. RPL15 ENSGALG00000011290 533.06 4290.71 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
33. RPL38 ENSGALG00000001465 531.65 4279.36 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
34. RPL26 RPL26 528.36 4252.88
35. RPS4 RPS4 520.38 4188.65
36. MT-CYB MT-CYB 512.86 4128.12
37. RPS11 ENSGALG00000017299 510.04 4105.42 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
38. SNRPD1 ENSGALG00000041334 502.53 4044.97 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
39. RPS3A ENSGALG00000010077 501.12 4033.62 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
40. RPL29 ENSGALG00000026978 494.08 3976.95 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
41. RPL19 ENSGALG00000001658 470.59 3787.88 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
42. RPS16 ENSGALG00000026490 468.71 3772.75 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
43. MT-ND4 MT-ND4 460.26 3704.73
44. RPL35 ENSGALG00000035677 456.03 3670.68 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
45. ALDOC ENSGALG00000026077 443.35 3568.62 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
46. RAN ENSGALG00000002569 441.01 3549.78 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
47. RPL24 ENSGALG00000015339 438.19 3527.08 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
48. RPL36 ENSGALG00000000474 438.19 3527.08 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
49. RPL14 ENSGALG00000043379 433.49 3489.25 ribosomal protein L14
50. MT-CO1 MT-CO1 417.52 3360.71
51. RPL36AL ENSGALG00000004952 416.58 3353.14 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
52. RPL18A 410.01 3300.26 ribosomal protein L18a
53. RPL12 ENSGALG00000008806 405.78 3266.21 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
54. RPL21 ENSGALG00000027035 405.78 3266.21 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
55. NME2 ENSGALG00000002932 392.16 3156.58 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
56. RPS27A ENSGALG00000036790 387.00 3115.04 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
57. ANP32B ENSGALG00000037483 373.84 3009.12 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
58. RPL5 ENSGALG00000005922 372.44 2997.85 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
59. MDK ENSGALG00000008367 371.50 2990.28 midkine [Source:NCBI gene;Acc:423196]
60. CIRBP ENSGALG00000030918 368.21 2963.80 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
61. RPS7 ENSGALG00000016392 366.80 2952.45 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
62. GNB2L1 ENSGALG00000000122 364.92 2937.32 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
63. RPLP2 ENSGALG00000034811 363.98 2929.75 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
64. RPS6 ENSGALG00000015082 358.82 2888.22 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
65. RPS14 ENSGALG00000004588 350.83 2823.90 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
66. RPS13 ENSGALG00000006096 332.98 2680.23 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
67. TCEB3 ENSGALG00000034625 332.98 2680.23 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
68. EIF5A2 ENSGALG00000009309 328.76 2646.26 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
69. ENO1 ENSGALG00000002377 325.00 2615.99 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
70. MT-ND3 MT-ND3 310.44 2498.80
71. ENSGALG00000028992 ENSGALG00000028992 307.62 2476.10
72. RPL6 ENSGALG00000004818 302.93 2438.35 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
73. TXN ENSGALG00000015704 300.58 2419.43 thioredoxin [Source:NCBI gene;Acc:396437]
74. RPL37 ENSGALG00000014833 299.64 2411.87 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
75. RPL23 ENSGALG00000001634 293.53 2362.68 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
76. RPS25 ENSGALG00000007699 291.66 2347.63 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
77. ENSGALG00000002696 ENSGALG00000002696 287.43 2313.58
78. RPS20 ENSGALG00000014432 286.49 2306.02 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
79. HMGN2 HMGN2 275.22 2215.30
80. MT-ND6 MT-ND6 270.05 2173.69
81. ENSGALG00000018384 ENSGALG00000018384 269.11 2166.12
82. ENSGALG00000028649 ENSGALG00000028649 268.64 2162.34
83. STMN1 ENSGALG00000001475 261.60 2105.67 stathmin 1 [Source:NCBI gene;Acc:396057]
84. RPL10A ENSGALG00000002644 253.61 2041.36 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
85. PRDX1 ENSGALG00000010243 247.04 1988.48 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
86. RPL31 ENSGALG00000016775 247.04 1988.48 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
87. RPL37A ENSGALG00000011472 247.04 1988.48 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
88. MT-ND1 MT-ND1 244.22 1965.78
89. UBB ENSGALG00000004509 242.34 1950.65 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
90. HSPA8 ENSGALG00000006512 239.52 1927.95 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
91. MIF ENSGALG00000006326 232.48 1871.28 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
92. RPL7 ENSGALG00000035252 231.07 1859.93 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
93. CRHOA CRHOA 224.49 1806.97
94. MARCKSL1 ENSGALG00000032335 223.09 1795.70 MARCKS like 1 [Source:NCBI gene;Acc:770764]
95. ENSGALG00000022570 ENSGALG00000022570 222.15 1788.13
96. PKM ENSGALG00000001992 221.68 1784.35 pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
97. SLC25A6_1 ENSGALG00000016691 217.45 1750.30 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
98. ATP5G3 216.98 1746.52 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
99. HMGB2 ENSGALG00000010745 213.69 1720.04 high mobility group box 2 [Source:NCBI gene;Acc:396482]
100. HMGN5 ENSGALG00000007131 207.59 1670.94 high mobility group nucleosome binding domain 5, transcript variant X1
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA