Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_posterior_slice_1, section s34.

Sample reads: 124,241. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 9950.44 80095.85
2. MT-ATP6 MT-ATP6 3277.10 26378.94
3. MT-CYB MT-CYB 2674.68 21529.78
4. EEF1A EEF1A 1751.03 14094.88
5. RPLP1 ENSGALG00000030878 1590.89 12805.83 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
6. RPS3A ENSGALG00000010077 1263.94 10174.06 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
7. RPS10 ENSGALG00000002813 1239.16 9974.59 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
8. MT-ND6 MT-ND6 1035.17 8332.58
9. MT-CO1 MT-CO1 1029.45 8286.54
10. MT-ND4 MT-ND4 1024.69 8248.22
11. gga-mir-3527 gga-mir-3527 1017.06 8186.80
12. MT-ND5 MT-ND5 880.76 7089.66
13. RPS29 ENSGALG00000012229 841.67 6775.00 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
14. RPL15 ENSGALG00000011290 836.91 6736.69 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
15. RPS8 ENSGALG00000010124 810.22 6521.85 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
16. GAPDH ENSGALG00000014442 794.97 6399.09 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
17. RPS12 ENSGALG00000013990 772.09 6214.92 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
18. RPLP0 ENSGALG00000023294 719.67 5792.97 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
19. RPL8 ENSGALG00000016232 690.12 5555.11 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
20. RPL6 ENSGALG00000004818 651.03 5240.45 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
21. RPL23 ENSGALG00000001634 650.08 5232.80 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
22. RPL38 ENSGALG00000001465 631.02 5079.38 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
23. MT-ND3 MT-ND3 589.08 4741.79
24. RPL35A ENSGALG00000007611, ENSGALG00000041230 574.78 4626.68 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
25. RPL35 ENSGALG00000035677 569.06 4580.64 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
26. RPL14 ENSGALG00000043379 566.20 4557.61 ribosomal protein L14
27. RPS21 ENSGALG00000005338 550.00 4427.21 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
28. RPS15A ENSGALG00000006771 544.28 4381.17 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
29. RPL23A ENSGALG00000003966 538.56 4335.13 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
30. RPL26 RPL26 530.93 4273.71
31. RPL36AL ENSGALG00000004952 528.07 4250.69 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
32. RPL18A 516.63 4158.60 ribosomal protein L18a
33. RPL7A ENSGALG00000003197 515.68 4150.95 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
34. RPL32 ENSGALG00000027142 510.91 4112.56 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
35. RPL29 ENSGALG00000026978 498.52 4012.83 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
36. RPL27 ENSGALG00000002837 495.66 3989.80 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
37. RPL27A ENSGALG00000005948 494.71 3982.16 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
38. RPS23 ENSGALG00000015617 486.13 3913.09 ribosomal protein S23
39. RPLP2 ENSGALG00000034811 481.37 3874.78 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
40. RPS14 ENSGALG00000004588 457.54 3682.96 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
41. RPL19 ENSGALG00000001658 448.00 3606.17 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
42. RPL4 ENSGALG00000007711 443.24 3567.85 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
43. RPS11 ENSGALG00000017299 438.47 3529.45 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
44. RPS4 RPS4 433.71 3491.14
45. RPS7 ENSGALG00000016392 430.85 3468.12 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
46. gga-mir-3533 ENSGALG00000027736 427.03 3437.37 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
47. ENSGALG00000018384 ENSGALG00000018384 418.45 3368.30
48. TMSB4X ENSGALG00000026383 417.50 3360.66 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
49. MT-ND1 MT-ND1 410.83 3306.97
50. RPSA 407.97 3283.95 ribosomal protein SA
51. STMN1 ENSGALG00000001475 407.02 3276.30 stathmin 1 [Source:NCBI gene;Acc:396057]
52. RPS20 ENSGALG00000014432 406.06 3268.57 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
53. RPS15 ENSGALG00000015195 405.11 3260.92 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
54. RPL13 ENSGALG00000006179 399.39 3214.88 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
55. RPL12 ENSGALG00000008806 387.95 3122.79 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
56. PPIA ENSGALG00000028600 383.19 3084.48 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
57. RPL21 ENSGALG00000027035 382.23 3076.75 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
58. RPL31 ENSGALG00000016775 380.33 3061.46 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
59. ATP5G3 357.45 2877.29 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
60. NME2 ENSGALG00000002932 357.45 2877.29 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
61. RPS16 ENSGALG00000026490 357.45 2877.29 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
62. RPS13 ENSGALG00000006096 356.50 2869.64 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
63. RPS24 ENSGALG00000004871 353.64 2846.62 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
64. RPS2 ENSGALG00000005490 334.57 2693.11 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
65. EEF1B2 ENSGALG00000008590 326.95 2631.78 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
66. RPS6 ENSGALG00000015082 325.04 2616.40 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
67. TCEB3 ENSGALG00000034625 322.18 2593.38 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
68. RPL5 ENSGALG00000005922 313.60 2524.32 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
69. RPS28 ENSGALG00000024398 310.74 2501.29 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
70. RPL7 ENSGALG00000035252 306.93 2470.63 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
71. RPL24 ENSGALG00000015339 305.98 2462.98 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
72. RPS25 ENSGALG00000007699 303.12 2439.96 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
73. EEF1D 297.40 2393.91 eukaryotic translation elongation factor 1 delta, transcript variant X13
74. RPS27A ENSGALG00000036790 294.54 2370.89 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
75. ENSGALG00000028649 ENSGALG00000028649 285.96 2301.83
76. MDK ENSGALG00000008367 281.19 2263.43 midkine [Source:NCBI gene;Acc:423196]
77. RPL10A ENSGALG00000002644 271.66 2186.72 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
78. TXN ENSGALG00000015704 270.71 2179.07 thioredoxin [Source:NCBI gene;Acc:396437]
79. GNB2L1 ENSGALG00000000122 266.90 2148.41 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
80. HMGN5 ENSGALG00000007131 265.94 2140.68 high mobility group nucleosome binding domain 5, transcript variant X1
81. RPL37 ENSGALG00000014833 264.04 2125.38 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
82. ANP32B ENSGALG00000037483 257.36 2071.61 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
83. ENSGALG00000002696 ENSGALG00000002696 257.36 2071.61
84. RPL3 ENSGALG00000012172 254.50 2048.59 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
85. RPL9 ENSGALG00000000150 243.07 1956.59 ribosomal protein L9 [Source:NCBI gene;Acc:425468]
86. RPS3 ENSGALG00000017330 242.11 1948.86 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
87. HMGN2 HMGN2 235.44 1895.17
88. RPL36 ENSGALG00000000474 233.53 1879.79 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
89. ENO1 ENSGALG00000002377 232.58 1872.15 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
90. H3-IX H3-IX 226.86 1826.10
91. CIRBP ENSGALG00000030918 225.91 1818.46 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
92. RPS17 ENSGALG00000002157 225.91 1818.46 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
93. CRHOA CRHOA 224.00 1803.08
94. TPT1 ENSGALG00000028872 220.19 1772.41 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
95. ENSGALG00000028992 ENSGALG00000028992 217.33 1749.39
96. ACTG1_1 ENSGALG00000001381 215.42 1734.02 Actin, gamma 1 [Source:NCBI gene;Acc:415296]
97. SNRPD1 ENSGALG00000041334 214.47 1726.37 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
98. HMGB2 ENSGALG00000010745 208.75 1680.33 high mobility group box 2 [Source:NCBI gene;Acc:396482]
99. RAN ENSGALG00000002569 198.27 1595.97 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
100. FTH FTH 185.87 1496.16
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA