Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_posterior_slice_1, section s24.

Sample reads: 124,237. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 11130.33 89596.33
2. MT-ATP6 MT-ATP6 2817.27 22678.31
3. MT-CYB MT-CYB 2134.43 17181.62
4. RPLP1 ENSGALG00000030878 1603.58 12908.41 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
5. EEF1A EEF1A 1497.85 12057.31
6. MT-ND6 MT-ND6 1146.51 9229.11
7. RPS10 ENSGALG00000002813 1122.28 9034.07 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
8. MT-CO1 MT-CO1 1022.06 8227.32
9. RPS3A ENSGALG00000010077 987.92 7952.51 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
10. RPS29 ENSGALG00000012229 915.23 7367.37 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
11. MT-ND4 MT-ND4 886.59 7136.82
12. RPS12 ENSGALG00000013990 871.17 7012.70 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
13. MT-ND5 MT-ND5 846.94 6817.65
14. ENSGALG00000018384 ENSGALG00000018384 830.42 6684.67
15. RPS8 ENSGALG00000010124 794.08 6392.14 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
16. RPL38 ENSGALG00000001465 789.67 6356.64 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
17. gga-mir-3527 gga-mir-3527 777.56 6259.16
18. RPL15 ENSGALG00000011290 737.91 5939.99 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
19. GAPDH ENSGALG00000014442 723.59 5824.72 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
20. RPL35A ENSGALG00000007611, ENSGALG00000041230 674.03 5425.77 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
21. RPS21 ENSGALG00000005338 667.42 5372.56 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
22. RPLP0 ENSGALG00000023294 646.50 5204.16 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
23. RPL8 ENSGALG00000016232 643.19 5177.52 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
24. RPL23 ENSGALG00000001634 618.96 4982.47 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
25. RPL14 ENSGALG00000043379 600.24 4831.78 ribosomal protein L14
26. RPL23A ENSGALG00000003966 595.83 4796.28 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
27. RPL6 ENSGALG00000004818 595.83 4796.28 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
28. RPL29 ENSGALG00000026978 582.62 4689.94 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
29. RPL26 RPL26 574.91 4627.88
30. RPL7A ENSGALG00000003197 557.29 4486.04 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
31. RPS15A ENSGALG00000006771 540.77 4353.06 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
32. RPLP2 ENSGALG00000034811 527.55 4246.64 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
33. RPL18A 525.35 4228.93 ribosomal protein L18a
34. RPL27 ENSGALG00000002837 512.13 4122.52 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
35. MT-ND3 MT-ND3 508.83 4095.95
36. RPS14 ENSGALG00000004588 485.70 3909.76 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
37. RPL36AL ENSGALG00000004952 483.50 3892.05 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
38. RPL19 ENSGALG00000001658 481.29 3874.26 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
39. RPL32 ENSGALG00000027142 479.09 3856.55 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
40. RPS23 ENSGALG00000015617 470.28 3785.63 ribosomal protein S23
41. RPL4 ENSGALG00000007711 452.66 3643.80 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
42. gga-mir-3533 ENSGALG00000027736 446.05 3590.59 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
43. ATP5G3 433.94 3493.11 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
44. RPS16 ENSGALG00000026490 432.83 3484.17 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
45. RPS25 ENSGALG00000007699 427.33 3439.90 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
46. RPS7 ENSGALG00000016392 425.12 3422.11 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
47. RPL35 ENSGALG00000035677 422.92 3404.40 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
48. RPS11 ENSGALG00000017299 404.20 3253.71 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
49. TMSB4X ENSGALG00000026383 398.69 3209.35 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
50. RPL27A ENSGALG00000005948 394.29 3173.93 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
51. STMN1 ENSGALG00000001475 382.17 3076.37 stathmin 1 [Source:NCBI gene;Acc:396057]
52. RPL21 ENSGALG00000027035 379.97 3058.66 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
53. PPIA ENSGALG00000028600 377.77 3040.95 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
54. RPL12 ENSGALG00000008806 373.36 3005.45 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
55. RPS24 ENSGALG00000004871 372.26 2996.60 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
56. RPL24 ENSGALG00000015339 367.85 2961.10 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
57. RPS4 RPS4 367.85 2961.10
58. RPL31 ENSGALG00000016775 365.65 2943.39 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
59. MT-ND1 MT-ND1 363.45 2925.68
60. RPS13 ENSGALG00000006096 363.45 2925.68 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
61. TCEB3 ENSGALG00000034625 361.25 2907.97 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
62. RPL13 ENSGALG00000006179 359.04 2890.18 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
63. RPS20 ENSGALG00000014432 354.64 2854.76 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
64. NME2 ENSGALG00000002932 337.02 2712.93 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
65. EEF1D 332.61 2677.43 eukaryotic translation elongation factor 1 delta, transcript variant X13
66. RPS6 ENSGALG00000015082 330.41 2659.72 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
67. MDK ENSGALG00000008367 326.00 2624.22 midkine [Source:NCBI gene;Acc:423196]
68. RPL37 ENSGALG00000014833 326.00 2624.22 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
69. RPSA 319.39 2571.01 ribosomal protein SA
70. RPS2 ENSGALG00000005490 317.19 2553.30 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
71. EEF1B2 ENSGALG00000008590 314.99 2535.59 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
72. RPL5 ENSGALG00000005922 308.38 2482.38 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
73. ENSGALG00000002696 ENSGALG00000002696 290.76 2340.54
74. RPS15 ENSGALG00000015195 290.76 2340.54 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
75. CIRBP ENSGALG00000030918 285.25 2296.19 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
76. GNB2L1 ENSGALG00000000122 281.95 2269.63 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
77. RPS3 ENSGALG00000017330 279.74 2251.84 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
78. HMGN2 HMGN2 273.14 2198.71
79. RPL10A ENSGALG00000002644 262.12 2110.00 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
80. ENSGALG00000028992 ENSGALG00000028992 259.92 2092.29
81. SNRPD1 ENSGALG00000041334 258.82 2083.44 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
82. RPS28 ENSGALG00000024398 257.72 2074.58 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
83. ENSGALG00000028649 ENSGALG00000028649 254.41 2047.94
84. RPS27A ENSGALG00000036790 253.31 2039.08 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
85. COX6C ENSGALG00000035996 241.20 1941.60 cytochrome c oxidase subunit 6C [Source:NCBI gene;Acc:420243]
86. HMGN5 ENSGALG00000007131 241.20 1941.60 high mobility group nucleosome binding domain 5, transcript variant X1
87. RPL36 ENSGALG00000000474 233.49 1879.54 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
88. ANP32B ENSGALG00000037483 223.58 1799.76 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
89. MT-ND2 MT-ND2 223.58 1799.76
90. RPL22 ENSGALG00000000719 222.47 1790.83 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
91. RPS17 ENSGALG00000002157 221.37 1781.97 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
92. TPT1 ENSGALG00000028872 218.07 1755.41 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
93. HMGB2 ENSGALG00000010745 212.56 1711.05 high mobility group box 2 [Source:NCBI gene;Acc:396482]
94. TXN ENSGALG00000015704 212.56 1711.05 thioredoxin [Source:NCBI gene;Acc:396437]
95. RPL9 ENSGALG00000000150 204.85 1648.99 ribosomal protein L9 [Source:NCBI gene;Acc:425468]
96. RPL7 ENSGALG00000035252 203.75 1640.14 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
97. ACTG1_1 ENSGALG00000001381 199.35 1604.72 Actin, gamma 1 [Source:NCBI gene;Acc:415296]
98. H3-IX H3-IX 197.14 1586.93
99. H3-IX_1 H3-IX_1 191.64 1542.65
100. ENO1 ENSGALG00000002377 186.13 1498.30 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA