Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_anterior_slice_1, section s37.

Sample reads: 124,246. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3678.62 29609.95
2. ENSGALG00000018384 ENSGALG00000018384 1275.90 10269.98
3. EEF1A EEF1A 1088.68 8763.00
4. RPLP1 ENSGALG00000030878 997.38 8028.11 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
5. RPS10 ENSGALG00000002813 996.22 8018.77 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
6. gga-mir-3533 ENSGALG00000027736 958.08 7711.78 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
7. RPL35A ENSGALG00000007611, ENSGALG00000041230 933.81 7516.42 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
8. RPS8 ENSGALG00000010124 933.81 7516.42 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
9. MT-ATP6 MT-ATP6 918.79 7395.52
10. MDK ENSGALG00000008367 906.08 7293.22 midkine [Source:NCBI gene;Acc:423196]
11. RPS23 ENSGALG00000015617 862.16 6939.70 ribosomal protein S23
12. RPLP0 ENSGALG00000023294 826.33 6651.30 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
13. RPS12 ENSGALG00000013990 807.84 6502.47 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
14. RPL4 ENSGALG00000007711 806.68 6493.13 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
15. GAPDH ENSGALG00000014442 739.65 5953.59 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
16. RPL7A ENSGALG00000003197 738.50 5944.33 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
17. MT-ND5 MT-ND5 677.24 5451.24
18. RPL8 ENSGALG00000016232 657.60 5293.15 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
19. ENSGALG00000018386 ENSGALG00000018386 642.57 5172.17
20. RPL27A ENSGALG00000005948 634.48 5107.06 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
21. RPSA 603.28 4855.92 ribosomal protein SA
22. RPL23A ENSGALG00000003966 597.50 4809.40 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
23. RPL27 ENSGALG00000002837 581.32 4679.16 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
24. RPL29 ENSGALG00000026978 580.17 4669.90 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
25. RPL32 ENSGALG00000027142 579.01 4660.57 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
26. RPS6 ENSGALG00000015082 579.01 4660.57 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
27. gga-mir-3527 gga-mir-3527 569.76 4586.11
28. RPL26 RPL26 567.45 4567.52
29. RPS28 ENSGALG00000024398 560.52 4511.74 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
30. RPL21 ENSGALG00000027035 553.58 4455.88 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
31. RPS3A ENSGALG00000010077 548.96 4418.69 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
32. RPL13 ENSGALG00000006179 545.49 4390.76 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
33. MT-CYB MT-CYB 544.34 4381.50
34. RPS15A ENSGALG00000006771 525.85 4232.67 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
35. RPS4 RPS4 513.13 4130.29
36. RPS21 ENSGALG00000005338 506.20 4074.51 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
37. RPL38 ENSGALG00000001465 496.95 4000.05 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
38. RPS15 ENSGALG00000015195 490.02 3944.27 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
39. RPL19 ENSGALG00000001658 487.71 3925.68 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
40. RPL36AL ENSGALG00000004952 483.09 3888.49 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
41. RPS11 ENSGALG00000017299 481.93 3879.15 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
42. TMSB4X ENSGALG00000026383 480.77 3869.81 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
43. RPS29 ENSGALG00000012229 465.75 3748.92 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
44. RPS14 ENSGALG00000004588 458.82 3693.13 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
45. RPS16 ENSGALG00000026490 456.50 3674.46 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
46. RPL5 ENSGALG00000005922 451.88 3637.27 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
47. RPS2 ENSGALG00000005490 443.79 3572.15 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
48. RPL14 ENSGALG00000043379 420.68 3386.14 ribosomal protein L14
49. RPL6 ENSGALG00000004818 417.21 3358.21 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
50. RPL35 ENSGALG00000035677 411.43 3311.68 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
51. RPL15 ENSGALG00000011290 401.03 3227.97 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
52. RPS7 ENSGALG00000016392 399.87 3218.63 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
53. RPL24 ENSGALG00000015339 396.41 3190.78 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
54. MT-ND3 MT-ND3 389.47 3134.92
55. ENSGALG00000002696 ENSGALG00000002696 380.23 3060.55
56. RPL12 ENSGALG00000008806 379.07 3051.21 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
57. MT-CO1 MT-CO1 375.61 3023.36
58. STMN1 ENSGALG00000001475 366.36 2948.91 stathmin 1 [Source:NCBI gene;Acc:396057]
59. MT-ND4 MT-ND4 358.27 2883.79
60. RPL36 ENSGALG00000000474 357.11 2874.45 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
61. ENO1 ENSGALG00000002377 351.34 2828.01 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
62. MT-ND6 MT-ND6 346.71 2790.74
63. SNRPD1 ENSGALG00000041334 343.25 2762.89 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
64. GNB2L1 ENSGALG00000000122 340.93 2744.21 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
65. TCEB3 ENSGALG00000034625 339.78 2734.96 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
66. RPL18A 334.00 2688.43 ribosomal protein L18a
67. RPS27A ENSGALG00000036790 327.07 2632.65 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
68. NME2 ENSGALG00000002932 324.75 2613.98 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
69. ENSGALG00000028992 ENSGALG00000028992 322.44 2595.38
70. CIRBP ENSGALG00000030918 316.66 2548.86 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
71. PPIA ENSGALG00000028600 315.51 2539.60 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
72. RPL23 ENSGALG00000001634 310.89 2502.42 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
73. RPL7 ENSGALG00000035252 307.42 2474.49 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
74. HBZ ENSGALG00000023740 305.11 2455.89 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
75. CRHOA CRHOA 299.33 2409.37
76. RPS25 ENSGALG00000007699 298.17 2400.03 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
77. UBB ENSGALG00000004509 298.17 2400.03 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
78. RPS20 ENSGALG00000014432 290.08 2334.91 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
79. HBG1 HBG1 288.93 2325.66
80. RAN ENSGALG00000002569 287.77 2316.32 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
81. RPL10A ENSGALG00000002644 283.15 2279.13 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
82. HMGN5 ENSGALG00000007131 280.84 2260.54 high mobility group nucleosome binding domain 5, transcript variant X1
83. EEF1D 277.37 2232.61 eukaryotic translation elongation factor 1 delta, transcript variant X13
84. ANP32B ENSGALG00000037483 273.90 2204.68 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
85. RPL37 ENSGALG00000014833 262.35 2111.71 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
86. TXN ENSGALG00000015704 262.35 2111.71 thioredoxin [Source:NCBI gene;Acc:396437]
87. MT-ND1 MT-ND1 260.03 2093.03
88. ENSGALG00000028649 ENSGALG00000028649 254.26 2046.59
89. HBE 254.26 2046.59 hemoglobin subunit epsilon
90. RPLP2 ENSGALG00000034811 250.79 2018.66 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
91. RPL31 ENSGALG00000016775 245.01 1972.13 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
92. DYL1 ENSGALG00000007153 240.39 1934.95 dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
93. RPS13 ENSGALG00000006096 240.39 1934.95 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
94. PRDX1 ENSGALG00000010243 224.21 1804.71 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
95. SET ENSGALG00000004701 217.27 1748.85 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
96. AKAP12 ENSGALG00000036240 216.12 1739.59 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
97. H3-IX H3-IX 211.49 1702.33
98. RPL37A ENSGALG00000011472 209.18 1683.73 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
99. EIF5A2 ENSGALG00000009309 208.03 1674.48 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
100. HMGN2 HMGN2 208.03 1674.48
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA