Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_anterior_slice_1, section s19.

Sample reads: 124,243. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3159.51 25431.70
2. EEF1A EEF1A 1293.61 10412.59
3. RPLP1 ENSGALG00000030878 1257.72 10123.71 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
4. gga-mir-3533 ENSGALG00000027736 1198.12 9643.97 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
5. MT-ATP6 MT-ATP6 1083.17 8718.71
6. RPLP0 ENSGALG00000023294 1045.47 8415.25 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
7. RPL35A ENSGALG00000007611, ENSGALG00000041230 1043.64 8400.52 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
8. RPS10 ENSGALG00000002813 904.37 7279.50 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
9. RPS8 ENSGALG00000010124 884.30 7117.95 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
10. RPL4 ENSGALG00000007711 838.68 6750.75 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
11. RPS23 ENSGALG00000015617 825.30 6643.05 ribosomal protein S23
12. RPS28 ENSGALG00000024398 798.54 6427.65 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
13. GAPDH ENSGALG00000014442 759.62 6114.37 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
14. RPS12 ENSGALG00000013990 692.72 5575.88 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
15. MT-ND5 MT-ND5 684.81 5512.21
16. RPL27A ENSGALG00000005948 682.38 5492.65 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
17. gga-mir-3527 gga-mir-3527 662.31 5331.10
18. RPSA 661.70 5326.19 ribosomal protein SA
19. RPL15 ENSGALG00000011290 648.93 5223.40 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
20. ENSGALG00000018384 ENSGALG00000018384 633.73 5101.05
21. RPL7A ENSGALG00000003197 627.65 5052.11 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
22. RPL23A ENSGALG00000003966 602.71 4851.37 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
23. RPS15 ENSGALG00000015195 602.10 4846.46 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
24. RPL32 ENSGALG00000027142 600.89 4836.72 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
25. RPS2 ENSGALG00000005490 574.73 4626.15 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
26. RPL27 ENSGALG00000002837 574.13 4621.32 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
27. RPL29 ENSGALG00000026978 556.49 4479.33 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
28. MT-CYB MT-CYB 544.93 4386.28
29. RPL8 ENSGALG00000016232 535.81 4312.87 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
30. RPL13 ENSGALG00000006179 534.59 4303.05 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
31. RPL26 RPL26 532.16 4283.49
32. MDK ENSGALG00000008367 530.94 4273.67 midkine [Source:NCBI gene;Acc:423196]
33. RPS11 ENSGALG00000017299 528.51 4254.11 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
34. RPS29 ENSGALG00000012229 522.43 4205.17 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
35. RPL19 ENSGALG00000001658 512.09 4121.94 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
36. RPS3A ENSGALG00000010077 500.53 4028.89 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
37. RPS21 ENSGALG00000005338 498.10 4009.33 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
38. RPL38 ENSGALG00000001465 490.80 3950.57 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
39. RPL21 ENSGALG00000027035 486.55 3916.36 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
40. PPIA ENSGALG00000028600 482.29 3882.07 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
41. RPS6 ENSGALG00000015082 474.38 3818.40 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
42. SNRPD1 ENSGALG00000041334 459.79 3700.97 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
43. RPS15A ENSGALG00000006771 457.96 3686.24 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
44. TMSB4X ENSGALG00000026383 454.31 3656.86 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
45. RPS16 ENSGALG00000026490 447.62 3603.01 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
46. RPS4 RPS4 447.62 3603.01
47. RPL36AL ENSGALG00000004952 445.19 3583.45 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
48. ENSGALG00000018386 ENSGALG00000018386 434.24 3495.31
49. MT-CO1 MT-CO1 432.42 3480.66
50. RPL12 ENSGALG00000008806 431.81 3475.75 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
51. MT-ND4 MT-ND4 426.94 3436.55
52. RPS27A ENSGALG00000036790 423.90 3412.08 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
53. RPL5 ENSGALG00000005922 419.65 3377.87 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
54. GNB2L1 ENSGALG00000000122 418.43 3368.05 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
55. RPL18A 412.96 3324.02 ribosomal protein L18a
56. RPLP2 ENSGALG00000034811 398.97 3211.41 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
57. RPL14 ENSGALG00000043379 396.54 3191.85 ribosomal protein L14
58. NME2 ENSGALG00000002932 394.71 3177.12 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
59. RPL24 ENSGALG00000015339 394.71 3177.12 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
60. RPL35 ENSGALG00000035677 387.41 3118.36 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
61. RPL36 ENSGALG00000000474 383.76 3088.98 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
62. RPS7 ENSGALG00000016392 365.52 2942.16 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
63. RPS25 ENSGALG00000007699 362.48 2917.69 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
64. ENSGALG00000002696 ENSGALG00000002696 359.44 2893.22
65. RPS14 ENSGALG00000004588 357.61 2878.49 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
66. RPS20 ENSGALG00000014432 345.45 2780.61 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
67. RAN ENSGALG00000002569 343.02 2761.05 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
68. RPL6 ENSGALG00000004818 332.68 2677.83 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
69. MT-ND3 MT-ND3 329.64 2653.36
70. CIRBP ENSGALG00000030918 328.42 2643.54 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
71. TCEB3 ENSGALG00000034625 324.16 2609.25 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
72. MT-ND6 MT-ND6 315.65 2540.75
73. HMGN5 ENSGALG00000007131 313.21 2521.11 high mobility group nucleosome binding domain 5, transcript variant X1
74. RPL23 ENSGALG00000001634 305.92 2462.43 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
75. RPS13 ENSGALG00000006096 305.31 2457.52 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
76. TXN ENSGALG00000015704 300.44 2418.32 thioredoxin [Source:NCBI gene;Acc:396437]
77. ANP32B ENSGALG00000037483 298.01 2398.76 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
78. ENSGALG00000028649 ENSGALG00000028649 287.67 2315.53
79. ENSGALG00000028992 ENSGALG00000028992 284.63 2291.06
80. RPL7 ENSGALG00000035252 271.25 2183.36 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
81. RPL10A ENSGALG00000002644 264.56 2129.51 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
82. AKAP12 ENSGALG00000036240 259.69 2090.31 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
83. CRHOA CRHOA 256.65 2065.84
84. RPL37 ENSGALG00000014833 252.40 2031.63 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
85. ENO1 ENSGALG00000002377 247.53 1992.43 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
86. RPL31 ENSGALG00000016775 243.88 1963.05 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
87. HMGN2 HMGN2 243.27 1958.14
88. ALDOC ENSGALG00000026077 240.84 1938.58 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
89. NUCKS1 ENSGALG00000000708 236.58 1904.29 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:NCBI gene;Acc:404775]
90. PRDX1 ENSGALG00000010243 232.33 1870.08 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
91. EEF1D 225.03 1811.32 eukaryotic translation elongation factor 1 delta, transcript variant X13
92. UBB ENSGALG00000004509 222.60 1791.76 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
93. MT-ND1 MT-ND1 221.38 1781.94
94. EIF5A2 ENSGALG00000009309 215.30 1733.00 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
95. STMN1 ENSGALG00000001475 215.30 1733.00 stathmin 1 [Source:NCBI gene;Acc:396057]
96. SET ENSGALG00000004701 210.43 1693.80 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
97. RPS17 ENSGALG00000002157 207.39 1669.33 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
98. H3-IX H3-IX 205.57 1654.68
99. LDHB ENSGALG00000035836 204.96 1649.77 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
100. DYL1 ENSGALG00000007153 194.01 1561.64 dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA