Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RBFOX3

Gene Name Gene ID Reads Annotation
RBFOX3 ENSG00000167281 329 RNA binding fox-1 homolog 3 [Source:HGNC Symbol;Acc:HGNC:27097]



Genes with expression patterns similar to RBFOX3

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. RBFOX3 ENSG00000167281 329 2 1.000 1.000 RNA binding fox-1 homolog 3 [Source:HGNC Symbol;Acc:HGNC:27097]
2. SST ENSG00000157005 12887 1.722 0.844 0.878 somatostatin [Source:HGNC Symbol;Acc:HGNC:11329]
3. GNAO1 ENSG00000087258 567 1.676 0.873 0.803 G protein subunit alpha o1 [Source:HGNC Symbol;Acc:HGNC:4389]
4. SYT4 ENSG00000132872 928 1.675 0.840 0.835 synaptotagmin 4 [Source:HGNC Symbol;Acc:HGNC:11512]
5. GAP43 ENSG00000172020 9990 1.672 0.811 0.861 growth associated protein 43 [Source:HGNC Symbol;Acc:HGNC:4140]
6. STMN2 ENSG00000104435 16286 1.631 0.811 0.820 stathmin 2 [Source:HGNC Symbol;Acc:HGNC:10577]
7. RTN1 ENSG00000139970 4545 1.625 0.819 0.806 reticulon 1 [Source:HGNC Symbol;Acc:HGNC:10467]
8. L1CAM ENSG00000198910 1652 1.618 0.828 0.790 L1 cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:6470]
9. NEFM ENSG00000104722 6565 1.615 0.774 0.841 neurofilament medium [Source:HGNC Symbol;Acc:HGNC:7734]
10. PDLIM1 ENSG00000107438 11977 1.613 0.798 0.815 PDZ and LIM domain 1 [Source:HGNC Symbol;Acc:HGNC:2067]
11. MLLT11 ENSG00000213190 18099 1.606 0.783 0.823 MLLT11, transcription factor 7 cofactor [Source:HGNC Symbol;Acc:HGNC:16997]
12. GDAP1L1 ENSG00000124194 1388 1.602 0.776 0.826 ganglioside induced differentiation associated protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:4213]
13. INA ENSG00000148798 12811 1.599 0.796 0.803 internexin neuronal intermediate filament protein alpha [Source:HGNC Symbol;Acc:HGNC:6057]
14. ATP6V1G2 ENSG00000206445, ENSG00000213760, ENSG00000226850, ENSG00000227587, ENSG00000230900, ENSG00000234668, ENSG00000234920 2106 1.582 0.782 0.800 ATPase H+ transporting V1 subunit G2 [Source:HGNC Symbol;Acc:HGNC:862]
15. ENO2 ENSG00000111674 2931 1.581 0.822 0.759 enolase 2 [Source:HGNC Symbol;Acc:HGNC:3353]
16. TUBB3 ENSG00000258947 53998 1.573 0.806 0.767 tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
17. NEFL ENSG00000277586 6204 1.572 0.787 0.785 neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
18. ELAVL4 ENSG00000162374 5082 1.572 0.813 0.759 ELAV like RNA binding protein 4 [Source:HGNC Symbol;Acc:HGNC:3315]
19. CRMP1 ENSG00000072832 9692 1.571 0.802 0.769 collapsin response mediator protein 1 [Source:HGNC Symbol;Acc:HGNC:2365]
20. TUBB2A ENSG00000137267 4508 1.558 0.792 0.766 tubulin beta 2A class IIa [Source:HGNC Symbol;Acc:HGNC:12412]
21. ELAVL3 ENSG00000196361 2164 1.548 0.834 0.714 ELAV like RNA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:3314]
22. LHX3 ENSG00000107187 507 1.547 0.780 0.767 LIM homeobox 3 [Source:HGNC Symbol;Acc:HGNC:6595]
23. MAPT ENSG00000186868, ENSG00000276155, ENSG00000277956 1829 1.542 0.742 0.800 microtubule associated protein tau [Source:HGNC Symbol;Acc:HGNC:6893]
24. TERF2IP ENSG00000166848 18929 1.529 0.779 0.750 TERF2 interacting protein [Source:HGNC Symbol;Acc:HGNC:19246]
25. CDK5R1 ENSG00000176749 4151 1.524 0.746 0.778 cyclin dependent kinase 5 regulatory subunit 1 [Source:HGNC Symbol;Acc:HGNC:1775]
26. SRRM4 ENSG00000139767 1060 1.52 0.795 0.725 serine/arginine repetitive matrix 4 [Source:HGNC Symbol;Acc:HGNC:29389]
27. STMN4 ENSG00000015592 748 1.518 0.778 0.740 stathmin 4 [Source:HGNC Symbol;Acc:HGNC:16078]
28. ARHGAP36 ENSG00000147256 614 1.515 0.728 0.787 Rho GTPase activating protein 36 [Source:HGNC Symbol;Acc:HGNC:26388]
29. SV2C ENSG00000122012 837 1.512 0.769 0.743 synaptic vesicle glycoprotein 2C [Source:HGNC Symbol;Acc:HGNC:30670]
30. SCML4 ENSG00000146285 198 1.511 0.770 0.741 Scm polycomb group protein like 4 [Source:HGNC Symbol;Acc:HGNC:21397]
31. CHRNA4 ENSG00000101204 750 1.496 0.701 0.795 cholinergic receptor nicotinic alpha 4 subunit [Source:HGNC Symbol;Acc:HGNC:1958]
32. SNCG ENSG00000173267 1866 1.495 0.739 0.756 synuclein gamma [Source:HGNC Symbol;Acc:HGNC:11141]
33. TUBA1A ENSG00000167552 83799 1.487 0.780 0.707 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
34. OLIG1 ENSG00000184221 511 1.48 0.780 0.700 oligodendrocyte transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:16983]
35. SMPD3 ENSG00000103056 241 1.48 0.750 0.730 sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]
36. RAB6B ENSG00000154917 1104 1.476 0.741 0.735 RAB6B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:14902]
37. SCG3 ENSG00000104112 681 1.475 0.762 0.713 secretogranin III [Source:HGNC Symbol;Acc:HGNC:13707]
38. CDKN2D ENSG00000129355 839 1.466 0.701 0.765 cyclin dependent kinase inhibitor 2D [Source:HGNC Symbol;Acc:HGNC:1790]
39. HMP19 643 1.464 0.701 0.763 HMP19 protein
40. SLC10A4 ENSG00000145248 260 1.463 0.732 0.731 solute carrier family 10 member 4 [Source:HGNC Symbol;Acc:HGNC:22980]
41. BASP1 ENSG00000176788 18176 1.458 0.755 0.703 brain abundant membrane attached signal protein 1 [Source:HGNC Symbol;Acc:HGNC:957]
42. KIF1A ENSG00000130294 2920 1.457 0.746 0.711 kinesin family member 1A [Source:HGNC Symbol;Acc:HGNC:888]
43. CALCB ENSG00000175868 1967 1.454 0.748 0.706 calcitonin related polypeptide beta [Source:HGNC Symbol;Acc:HGNC:1438]
44. MAPRE2 ENSG00000166974 5413 1.454 0.724 0.730 microtubule associated protein RP/EB family member 2 [Source:HGNC Symbol;Acc:HGNC:6891]
45. FAM19A5 ENSG00000219438 1353 1.447 0.711 0.736 family with sequence similarity 19 member A5, C-C motif chemokine like [Source:HGNC Symbol;Acc:HGNC:21592]
46. SCN3A ENSG00000153253 621 1.443 0.709 0.734 sodium voltage-gated channel alpha subunit 3 [Source:HGNC Symbol;Acc:HGNC:10590]
47. CAMK2N1 ENSG00000162545 10727 1.439 0.714 0.725 calcium/calmodulin dependent protein kinase II inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:24190]
48. CALY ENSG00000130643 78 0.836 - 0.836 calcyon neuron specific vesicular protein [Source:HGNC Symbol;Acc:HGNC:17938]
49. NCAN ENSG00000130287 1136 0.836 0.836 - neurocan [Source:HGNC Symbol;Acc:HGNC:2465]
50. PHF21B ENSG00000056487 2704 0.817 0.817 - PHD finger protein 21B [Source:HGNC Symbol;Acc:HGNC:25161]
51. DCX ENSG00000077279 9569 0.817 0.817 - doublecortin [Source:HGNC Symbol;Acc:HGNC:2714]
52. REEP1 ENSG00000068615 2132 0.813 0.813 - receptor accessory protein 1 [Source:HGNC Symbol;Acc:HGNC:25786]
53. GNG2 ENSG00000186469 5596 0.809 0.809 - G protein subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:4404]
54. MYT1 ENSG00000196132, ENSG00000276876 1089 0.803 0.803 - myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]
55. ISL1 ENSG00000016082 4314 0.798 0.798 - ISL LIM homeobox 1 [Source:HGNC Symbol;Acc:HGNC:6132]
56. ECEL1 ENSG00000171551 286 0.795 - 0.795 endothelin converting enzyme like 1 [Source:HGNC Symbol;Acc:HGNC:3147]
57. NCAM1 ENSG00000149294 14656 0.794 0.794 - neural cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:7656]
58. CNTN2 ENSG00000184144 4674 0.794 0.794 - contactin 2 [Source:HGNC Symbol;Acc:HGNC:2172]
59. CELF5 ENSG00000161082 441 0.79 0.790 - CUGBP Elav-like family member 5 [Source:HGNC Symbol;Acc:HGNC:14058]
60. GABRB3 ENSG00000166206 675 0.79 0.790 - gamma-aminobutyric acid type A receptor beta3 subunit [Source:HGNC Symbol;Acc:HGNC:4083]
61. LHX4 ENSG00000121454 20 0.788 - 0.788 LIM homeobox 4 [Source:HGNC Symbol;Acc:HGNC:21734]
62. DPYSL3 ENSG00000113657 7319 0.784 0.784 - dihydropyrimidinase like 3 [Source:HGNC Symbol;Acc:HGNC:3015]
63. CHODL ENSG00000154645 212 0.784 - 0.784 chondrolectin [Source:HGNC Symbol;Acc:HGNC:17807]
64. NPTX2 ENSG00000106236 199 0.783 0.783 - neuronal pentraxin 2 [Source:HGNC Symbol;Acc:HGNC:7953]
65. RBFOX1 ENSG00000078328 852 0.783 0.783 - RNA binding fox-1 homolog 1 [Source:HGNC Symbol;Acc:HGNC:18222]
66. CNR1 ENSG00000118432 938 0.782 0.782 - cannabinoid receptor 1 [Source:HGNC Symbol;Acc:HGNC:2159]
67. CADPS ENSG00000163618 1353 0.78 0.780 - calcium dependent secretion activator [Source:HGNC Symbol;Acc:HGNC:1426]
68. C11orf87 ENSG00000185742 68 0.779 - 0.779 chromosome 11 open reading frame 87 [Source:HGNC Symbol;Acc:HGNC:33788]
69. CHRNB2 ENSG00000160716 509 0.778 0.778 - cholinergic receptor nicotinic beta 2 subunit [Source:HGNC Symbol;Acc:HGNC:1962]
70. MNX1 ENSG00000130675 512 0.776 0.776 - motor neuron and pancreas homeobox 1 [Source:HGNC Symbol;Acc:HGNC:4979]
71. ESRRG ENSG00000196482 879 0.775 0.775 - estrogen related receptor gamma [Source:HGNC Symbol;Acc:HGNC:3474]
72. ISL2 ENSG00000159556 593 0.775 0.775 - ISL LIM homeobox 2 [Source:HGNC Symbol;Acc:HGNC:18524]
73. ACTL6B ENSG00000077080 270 0.773 0.773 - actin like 6B [Source:HGNC Symbol;Acc:HGNC:160]
74. CEND1 ENSG00000184524 300 0.771 - 0.771 cell cycle exit and neuronal differentiation 1 [Source:HGNC Symbol;Acc:HGNC:24153]
75. SYT5 ENSG00000129990 85 0.771 - 0.771 synaptotagmin 5 [Source:HGNC Symbol;Acc:HGNC:11513]
76. AKR1C2 ENSG00000151632 457 0.767 0.767 - aldo-keto reductase family 1 member C2 [Source:HGNC Symbol;Acc:HGNC:385]
77. IRX6 ENSG00000159387 238 0.764 - 0.764 iroquois homeobox 6 [Source:HGNC Symbol;Acc:HGNC:14675]
78. FBXL16 ENSG00000127585 196 0.763 - 0.763 F-box and leucine rich repeat protein 16 [Source:HGNC Symbol;Acc:HGNC:14150]
79. ONECUT2 ENSG00000119547 3914 0.762 0.762 - one cut homeobox 2 [Source:HGNC Symbol;Acc:HGNC:8139]
80. PAK7 348 0.761 0.761 - p21 (RAC1) activated kinase 7, transcript variant X6
81. RUFY3 ENSG00000018189 4536 0.759 - 0.759 RUN and FYVE domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30285]
82. LPPR1 LPPR1 554 0.759 0.759 -
83. RUNDC3B ENSG00000105784 261 0.758 - 0.758 RUN domain containing 3B [Source:HGNC Symbol;Acc:HGNC:30286]
84. SLC18A3 ENSG00000187714 4213 0.756 0.756 - solute carrier family 18 member A3 [Source:HGNC Symbol;Acc:HGNC:10936]
85. FAIM2 ENSG00000135472 687 0.756 - 0.756 Fas apoptotic inhibitory molecule 2 [Source:HGNC Symbol;Acc:HGNC:17067]
86. ELAVL2 ENSG00000107105 5067 0.755 0.755 - ELAV like RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:3313]
87. SNAP25 ENSG00000132639 1533 0.754 0.754 - synaptosome associated protein 25 [Source:HGNC Symbol;Acc:HGNC:11132]
88. MAP1B ENSG00000131711 44568 0.753 0.753 - microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]
89. ISLR2 ENSG00000167178 161 0.753 - 0.753 immunoglobulin superfamily containing leucine rich repeat 2 [Source:HGNC Symbol;Acc:HGNC:29286]
90. GNG3 ENSG00000162188 958 0.751 - 0.751 G protein subunit gamma 3 [Source:HGNC Symbol;Acc:HGNC:4405]
91. ST8SIA1 ENSG00000111728 1398 0.75 0.750 - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10869]
92. POU2F2 ENSG00000028277 2245 0.748 0.748 - POU class 2 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9213]
93. CELSR3 ENSG00000008300 408 0.748 0.748 - cadherin EGF LAG seven-pass G-type receptor 3 [Source:HGNC Symbol;Acc:HGNC:3230]
94. YWHAZ ENSG00000164924 56105 0.747 0.747 - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:HGNC Symbol;Acc:HGNC:12855]
95. MAP2 ENSG00000078018 3573 0.745 0.745 - microtubule associated protein 2 [Source:HGNC Symbol;Acc:HGNC:6839]
96. UCHL1 ENSG00000154277 28345 0.744 0.744 - ubiquitin C-terminal hydrolase L1 [Source:HGNC Symbol;Acc:HGNC:12513]
97. KIF21B ENSG00000116852 3406 0.743 0.743 - kinesin family member 21B [Source:HGNC Symbol;Acc:HGNC:29442]
98. SEZ6L2 ENSG00000174938 1533 0.742 - 0.742 seizure related 6 homolog like 2 [Source:HGNC Symbol;Acc:HGNC:30844]
99. ATP1A3 ENSG00000105409 428 0.741 0.741 - ATPase Na+/K+ transporting subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:801]
100. UBE2QL1 ENSG00000215218 1320 0.74 - 0.740 ubiquitin conjugating enzyme E2 Q family like 1 [Source:HGNC Symbol;Acc:HGNC:37269]

There are 47 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA