Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SOX6

Gene Name Gene ID Reads Annotation
SOX6 ENSG00000110693 4046 SRY-box 6 [Source:HGNC Symbol;Acc:HGNC:16421]



Genes with expression patterns similar to SOX6

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. SOX6 ENSG00000110693 4046 2 1.000 1.000 SRY-box 6 [Source:HGNC Symbol;Acc:HGNC:16421]
2. BNC2 ENSG00000173068 7220 1.556 0.790 0.766 basonuclin 2 [Source:HGNC Symbol;Acc:HGNC:30988]
3. ROR1 ENSG00000185483 9648 1.536 0.752 0.784 receptor tyrosine kinase like orphan receptor 1 [Source:HGNC Symbol;Acc:HGNC:10256]
4. COL3A1 ENSG00000168542 140021 1.53 0.770 0.760 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
5. SFRP1 ENSG00000104332 280077 1.461 0.736 0.725 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
6. PPAP2B PPAP2B 5362 1.429 0.702 0.727
7. KCTD12 ENSG00000178695 23035 0.806 0.806 - potassium channel tetramerization domain containing 12 [Source:HGNC Symbol;Acc:HGNC:14678]
8. FNDC3B ENSG00000075420 3523 0.802 0.802 - fibronectin type III domain containing 3B [Source:HGNC Symbol;Acc:HGNC:24670]
9. PDGFRB ENSG00000113721 2455 0.799 0.799 - platelet derived growth factor receptor beta [Source:HGNC Symbol;Acc:HGNC:8804]
10. MMP11 ENSG00000099953, ENSG00000275365 2049 0.796 0.796 - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
11. COL1A2 ENSG00000164692 43340 0.796 0.796 - collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
12. COL6A1 ENSG00000142156 20649 0.786 0.786 - collagen type VI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2211]
13. MYL9 ENSG00000101335 4604 0.785 0.785 - myosin light chain 9 [Source:HGNC Symbol;Acc:HGNC:15754]
14. CSRP1 ENSG00000159176 5731 0.783 0.783 - cysteine and glycine rich protein 1 [Source:HGNC Symbol;Acc:HGNC:2469]
15. COL1A1 ENSG00000108821 71290 0.779 0.779 - collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
16. RBMS1 ENSG00000153250 11118 0.777 0.777 - RNA binding motif single stranded interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9907]
17. PXDN ENSG00000130508 44183 0.777 0.777 - peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966]
18. KRT8 ENSG00000170421 12050 0.776 0.776 - keratin 8 [Source:HGNC Symbol;Acc:HGNC:6446]
19. NFIB ENSG00000147862 8306 0.775 0.775 - nuclear factor I B [Source:HGNC Symbol;Acc:HGNC:7785]
20. UNC5B ENSG00000107731 3573 0.772 0.772 - unc-5 netrin receptor B [Source:HGNC Symbol;Acc:HGNC:12568]
21. IFITM3 ENSG00000142089 57239 0.772 0.772 - interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
22. SVEP1 ENSG00000165124 1854 0.771 0.771 - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15985]
23. NXPH2 ENSG00000144227 683 0.77 - 0.770 neurexophilin 2 [Source:HGNC Symbol;Acc:HGNC:8076]
24. SCUBE3 ENSG00000146197 4847 0.769 0.769 - signal peptide, CUB domain and EGF like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:13655]
25. KRT19 ENSG00000171345 1700 0.766 0.766 - keratin 19 [Source:HGNC Symbol;Acc:HGNC:6436]
26. AHNAK ENSG00000124942 11800 0.764 0.764 - AHNAK nucleoprotein [Source:HGNC Symbol;Acc:HGNC:347]
27. NEAT1 ENSG00000245532 4794 0.762 0.762 - nuclear paraspeckle assembly transcript 1 [Source:HGNC Symbol;Acc:HGNC:30815]
28. PCDH9 ENSG00000184226 1058 0.76 0.760 - protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661]
29. MYH9 ENSG00000100345 12447 0.76 0.760 - myosin heavy chain 9 [Source:HGNC Symbol;Acc:HGNC:7579]
30. GPC3 ENSG00000147257 34465 0.756 0.756 - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
31. SERINC5 ENSG00000164300 3838 0.756 0.756 - serine incorporator 5 [Source:HGNC Symbol;Acc:HGNC:18825]
32. RBPMS ENSG00000157110 10094 0.755 0.755 - RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
33. ADD3 ENSG00000148700 7732 0.754 0.754 - adducin 3 [Source:HGNC Symbol;Acc:HGNC:245]
34. ORAI3 ENSG00000175938 736 0.753 0.753 - ORAI calcium release-activated calcium modulator 3 [Source:HGNC Symbol;Acc:HGNC:28185]
35. CTSB ENSG00000164733 7440 0.751 0.751 - cathepsin B [Source:HGNC Symbol;Acc:HGNC:2527]
36. SPARC ENSG00000113140 39707 0.75 0.750 - secreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]
37. IREB2 ENSG00000136381 5421 0.749 0.749 - iron responsive element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6115]
38. DSP ENSG00000096696 5097 0.749 0.749 - desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
39. FREM2 ENSG00000150893 3376 0.749 0.749 - FRAS1 related extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:25396]
40. COL6A2 ENSG00000142173 2550 0.748 0.748 - collagen type VI alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2212]
41. TSHZ2 ENSG00000182463 10473 0.746 0.746 - teashirt zinc finger homeobox 2 [Source:HGNC Symbol;Acc:HGNC:13010]
42. COL5A1 ENSG00000130635 11942 0.744 0.744 - collagen type V alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2209]
43. TEAD3 ENSG00000007866 2898 0.736 0.736 - TEA domain transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:11716]
44. WSB1 ENSG00000109046 15068 0.735 0.735 - WD repeat and SOCS box containing 1 [Source:HGNC Symbol;Acc:HGNC:19221]
45. TRANK1 ENSG00000168016 5941 0.734 0.734 - tetratricopeptide repeat and ankyrin repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:29011]
46. RHOBTB3 ENSG00000164292 20064 0.734 0.734 - Rho related BTB domain containing 3 [Source:HGNC Symbol;Acc:HGNC:18757]
47. HAND2 ENSG00000164107 5416 0.733 0.733 - heart and neural crest derivatives expressed 2 [Source:HGNC Symbol;Acc:HGNC:4808]
48. CD74 ENSG00000019582 1778 0.733 0.733 - CD74 molecule [Source:HGNC Symbol;Acc:HGNC:1697]
49. PDGFRA ENSG00000134853 7332 0.731 - 0.731 platelet derived growth factor receptor alpha [Source:HGNC Symbol;Acc:HGNC:8803]
50. POSTN ENSG00000133110 5228 0.73 0.730 - periostin [Source:HGNC Symbol;Acc:HGNC:16953]
51. CLMN ENSG00000165959 1437 0.729 0.729 - calmin [Source:HGNC Symbol;Acc:HGNC:19972]
52. GATA6-AS1 ENSG00000266010 839 0.729 0.729 - GATA6 antisense RNA 1 (head to head) [Source:HGNC Symbol;Acc:HGNC:48840]
53. KCNQ1OT1 ENSG00000269821 39494 0.728 0.728 - KCNQ1 opposite strand/antisense transcript 1 [Source:HGNC Symbol;Acc:HGNC:6295]
54. STAT6 ENSG00000166888 2411 0.726 0.726 - signal transducer and activator of transcription 6 [Source:HGNC Symbol;Acc:HGNC:11368]
55. SYTL5 ENSG00000147041 256 0.725 0.725 - synaptotagmin like 5 [Source:HGNC Symbol;Acc:HGNC:15589]
56. GATA6 ENSG00000141448 3614 0.724 0.724 - GATA binding protein 6 [Source:HGNC Symbol;Acc:HGNC:4174]
57. IL6ST ENSG00000134352 9416 0.723 - 0.723 interleukin 6 signal transducer [Source:HGNC Symbol;Acc:HGNC:6021]
58. DMKN ENSG00000161249 3603 0.72 0.720 - dermokine [Source:HGNC Symbol;Acc:HGNC:25063]
59. FBXO17 ENSG00000269190, ENSG00000282954 4383 0.72 0.720 - F-box protein 17 [Source:HGNC Symbol;Acc:HGNC:18754]
60. PHACTR2 ENSG00000112419 13720 0.719 0.719 - phosphatase and actin regulator 2 [Source:HGNC Symbol;Acc:HGNC:20956]
61. EMCN ENSG00000164035 2329 0.717 0.717 - endomucin [Source:HGNC Symbol;Acc:HGNC:16041]
62. ARHGAP28 ENSG00000088756 4386 0.717 - 0.717 Rho GTPase activating protein 28 [Source:HGNC Symbol;Acc:HGNC:25509]
63. ARHGAP23 ENSG00000273780, ENSG00000275832 6311 0.717 0.717 - Rho GTPase activating protein 23 [Source:HGNC Symbol;Acc:HGNC:29293]
64. MPPED2 ENSG00000066382 3879 0.717 0.717 - metallophosphoesterase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:1180]
65. NPC2 ENSG00000119655 5889 0.714 0.714 - NPC intracellular cholesterol transporter 2 [Source:HGNC Symbol;Acc:HGNC:14537]
66. MAP3K1 ENSG00000095015 8341 0.714 - 0.714 mitogen-activated protein kinase kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:6848]
67. LOC100131257 3501 0.714 0.714 - zinc finger protein 655 pseudogene
68. ACTN4 ENSG00000130402, ENSG00000282844 11089 0.713 0.713 - actinin alpha 4 [Source:HGNC Symbol;Acc:HGNC:166]
69. H6PD ENSG00000049239 2369 0.712 0.712 - hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4795]
70. PDE11A ENSG00000128655, ENSG00000284741 1225 0.711 0.711 - phosphodiesterase 11A [Source:HGNC Symbol;Acc:HGNC:8773]
71. TRIP10 ENSG00000125733 1481 0.71 0.710 - thyroid hormone receptor interactor 10 [Source:HGNC Symbol;Acc:HGNC:12304]
72. FBLIM1 ENSG00000162458 6244 0.709 0.709 - filamin binding LIM protein 1 [Source:HGNC Symbol;Acc:HGNC:24686]
73. GATA3 ENSG00000107485 2433 0.709 0.709 - GATA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:4172]
74. CNTN4 ENSG00000144619 2198 0.709 0.709 - contactin 4 [Source:HGNC Symbol;Acc:HGNC:2174]
75. CALD1 ENSG00000122786 14110 0.709 - 0.709 caldesmon 1 [Source:HGNC Symbol;Acc:HGNC:1441]
76. GPC6 ENSG00000183098 5564 0.708 - 0.708 glypican 6 [Source:HGNC Symbol;Acc:HGNC:4454]
77. DCN ENSG00000011465 12980 0.707 0.707 - decorin [Source:HGNC Symbol;Acc:HGNC:2705]
78. SERPINB6 ENSG00000124570 4498 0.707 0.707 - serpin family B member 6 [Source:HGNC Symbol;Acc:HGNC:8950]
79. GNG12 ENSG00000172380 3600 0.706 0.706 - G protein subunit gamma 12 [Source:HGNC Symbol;Acc:HGNC:19663]
80. DLC1 ENSG00000164741, ENSG00000285265 2773 0.705 0.705 - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
81. HOXD9 ENSG00000128709 398 0.704 0.704 - homeobox D9 [Source:HGNC Symbol;Acc:HGNC:5140]
82. DUSP9 ENSG00000130829 1439 0.703 0.703 - dual specificity phosphatase 9 [Source:HGNC Symbol;Acc:HGNC:3076]
83. LAIR1 ENSG00000167613, ENSG00000274110, ENSG00000276053, ENSG00000276163, ENSG00000278154 2733 0.703 0.703 - leukocyte associated immunoglobulin like receptor 1 [Source:HGNC Symbol;Acc:HGNC:6477]
84. APOE ENSG00000130203 3263 0.702 0.702 - apolipoprotein E [Source:HGNC Symbol;Acc:HGNC:613]
85. MIR503HG ENSG00000223749 600 0.702 0.702 - MIR503 host gene [Source:HGNC Symbol;Acc:HGNC:28258]
86. ST7 ENSG00000004866 2439 0.702 0.702 - suppression of tumorigenicity 7 [Source:HGNC Symbol;Acc:HGNC:11351]
87. PLAGL1 ENSG00000118495 6344 0.702 0.702 - PLAG1 like zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:9046]
88. CKAP4 ENSG00000136026 9372 0.701 0.701 - cytoskeleton associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16991]
89. PITX1 ENSG00000069011 817 0.7 0.700 - paired like homeodomain 1 [Source:HGNC Symbol;Acc:HGNC:9004]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA