Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SHISA3

Gene Name Gene ID Reads Annotation
SHISA3 ENSG00000178343 7060 shisa family member 3 [Source:HGNC Symbol;Acc:HGNC:25159]



Genes with expression patterns similar to SHISA3

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. SHISA3 ENSG00000178343 7060 2 1.000 1.000 shisa family member 3 [Source:HGNC Symbol;Acc:HGNC:25159]
2. IGFBP3 ENSG00000146674 2312 1.815 0.948 0.867 insulin like growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:5472]
3. GATA6 ENSG00000141448 3614 1.792 0.935 0.857 GATA binding protein 6 [Source:HGNC Symbol;Acc:HGNC:4174]
4. GUCY1A3 1501 1.761 0.949 0.812 guanylate cyclase 1, soluble, alpha 3, transcript variant X7
5. SFRP1 ENSG00000104332 280077 1.696 0.937 0.759 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
6. CCDC3 ENSG00000151468 3108 1.673 0.936 0.737 coiled-coil domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23813]
7. BAMBI ENSG00000095739 2641 1.662 0.920 0.742 BMP and activin membrane bound inhibitor [Source:HGNC Symbol;Acc:HGNC:30251]
8. PEG3 ENSG00000198300 11207 1.661 0.837 0.824 paternally expressed 3 [Source:HGNC Symbol;Acc:HGNC:8826]
9. FREM2 ENSG00000150893 3376 1.602 0.887 0.715 FRAS1 related extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:25396]
10. MATN2 ENSG00000132561 968 1.601 0.864 0.737 matrilin 2 [Source:HGNC Symbol;Acc:HGNC:6908]
11. GRIA4 ENSG00000152578 1876 1.601 0.833 0.768 glutamate ionotropic receptor AMPA type subunit 4 [Source:HGNC Symbol;Acc:HGNC:4574]
12. COL3A1 ENSG00000168542 140021 1.596 0.862 0.734 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
13. BEND4 ENSG00000188848 506 1.585 0.835 0.750 BEN domain containing 4 [Source:HGNC Symbol;Acc:HGNC:23815]
14. DSG2 ENSG00000046604 4179 1.535 0.775 0.760 desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
15. MGARP ENSG00000137463 987 1.51 0.726 0.784 mitochondria localized glutamic acid rich protein [Source:HGNC Symbol;Acc:HGNC:29969]
16. IL6ST ENSG00000134352 9416 1.506 0.794 0.712 interleukin 6 signal transducer [Source:HGNC Symbol;Acc:HGNC:6021]
17. ZFPM2 ENSG00000169946 826 1.503 0.733 0.770 zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
18. ATP2B4 ENSG00000058668 5432 1.495 0.704 0.791 ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
19. PODXL ENSG00000128567 4375 0.968 0.968 - podocalyxin like [Source:HGNC Symbol;Acc:HGNC:9171]
20. DLK1 ENSG00000185559 70813 0.955 0.955 - delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
21. TCF21 ENSG00000118526 1286 0.937 0.937 - transcription factor 21 [Source:HGNC Symbol;Acc:HGNC:11632]
22. FSTL5 ENSG00000168843 553 0.911 - 0.911 follistatin like 5 [Source:HGNC Symbol;Acc:HGNC:21386]
23. NPNT ENSG00000168743 749 0.904 0.904 - nephronectin [Source:HGNC Symbol;Acc:HGNC:27405]
24. GATA6-AS1 ENSG00000266010 839 0.902 0.902 - GATA6 antisense RNA 1 (head to head) [Source:HGNC Symbol;Acc:HGNC:48840]
25. MPP5 ENSG00000072415 2853 0.901 0.901 - membrane palmitoylated protein 5 [Source:HGNC Symbol;Acc:HGNC:18669]
26. FAM65A 3785 0.901 0.901 - family with sequence similarity 65 member A, transcript variant X7
27. CLIC5 ENSG00000112782 1596 0.899 0.899 - chloride intracellular channel 5 [Source:HGNC Symbol;Acc:HGNC:13517]
28. GATA5 ENSG00000130700 1069 0.893 0.893 - GATA binding protein 5 [Source:HGNC Symbol;Acc:HGNC:15802]
29. PDE3A ENSG00000172572 3123 0.893 0.893 - phosphodiesterase 3A [Source:HGNC Symbol;Acc:HGNC:8778]
30. NPHS2 ENSG00000116218 6339 0.893 0.893 - NPHS2, podocin [Source:HGNC Symbol;Acc:HGNC:13394]
31. BST2 ENSG00000130303 1588 0.892 0.892 - bone marrow stromal cell antigen 2 [Source:HGNC Symbol;Acc:HGNC:1119]
32. SLC48A1 ENSG00000211584 2891 0.89 0.890 - solute carrier family 48 member 1 [Source:HGNC Symbol;Acc:HGNC:26035]
33. NRK ENSG00000123572 4309 0.89 0.890 - Nik related kinase [Source:HGNC Symbol;Acc:HGNC:25391]
34. SOST ENSG00000167941 830 0.889 0.889 - sclerostin [Source:HGNC Symbol;Acc:HGNC:13771]
35. NPHS1 ENSG00000161270 1427 0.889 0.889 - NPHS1, nephrin [Source:HGNC Symbol;Acc:HGNC:7908]
36. MAGI2-AS3 ENSG00000234456 5066 0.887 0.887 - MAGI2 antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40862]
37. COL1A1 ENSG00000108821 71290 0.886 0.886 - collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
38. SPARC ENSG00000113140 39707 0.886 0.886 - secreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]
39. ST6GALNAC3 ENSG00000184005 9379 0.885 0.885 - ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:19343]
40. LAMA5 ENSG00000130702 4073 0.884 0.884 - laminin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6485]
41. HAND1 ENSG00000113196 3661 0.883 0.883 - heart and neural crest derivatives expressed 1 [Source:HGNC Symbol;Acc:HGNC:4807]
42. SEMA6D ENSG00000137872 5938 0.882 - 0.882 semaphorin 6D [Source:HGNC Symbol;Acc:HGNC:16770]
43. COL6A2 ENSG00000142173 2550 0.88 0.880 - collagen type VI alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2212]
44. SERINC5 ENSG00000164300 3838 0.878 0.878 - serine incorporator 5 [Source:HGNC Symbol;Acc:HGNC:18825]
45. SYTL1 ENSG00000142765 333 0.877 0.877 - synaptotagmin like 1 [Source:HGNC Symbol;Acc:HGNC:15584]
46. CDH11 ENSG00000140937 5411 0.877 - 0.877 cadherin 11 [Source:HGNC Symbol;Acc:HGNC:1750]
47. HAND2 ENSG00000164107 5416 0.876 0.876 - heart and neural crest derivatives expressed 2 [Source:HGNC Symbol;Acc:HGNC:4808]
48. KLK6 ENSG00000167755 1069 0.871 0.871 - kallikrein related peptidase 6 [Source:HGNC Symbol;Acc:HGNC:6367]
49. VPS13A ENSG00000197969 1547 0.87 - 0.870 vacuolar protein sorting 13 homolog A [Source:HGNC Symbol;Acc:HGNC:1908]
50. CTGF ENSG00000118523 4166 0.87 0.870 - connective tissue growth factor [Source:HGNC Symbol;Acc:HGNC:2500]
51. SBSPON ENSG00000164764 263 0.869 0.869 - somatomedin B and thrombospondin type 1 domain containing [Source:HGNC Symbol;Acc:HGNC:30362]
52. HLX ENSG00000136630 2104 0.862 0.862 - H2.0 like homeobox [Source:HGNC Symbol;Acc:HGNC:4978]
53. ANXA2 ENSG00000182718 24280 0.862 0.862 - annexin A2 [Source:HGNC Symbol;Acc:HGNC:537]
54. SPOCK2 ENSG00000107742 3481 0.861 0.861 - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:HGNC Symbol;Acc:HGNC:13564]
55. ALPK2 ENSG00000198796 503 0.857 0.857 - alpha kinase 2 [Source:HGNC Symbol;Acc:HGNC:20565]
56. PTPRO ENSG00000151490 826 0.856 0.856 - protein tyrosine phosphatase, receptor type O [Source:HGNC Symbol;Acc:HGNC:9678]
57. SERPIND1 ENSG00000099937 203 0.856 0.856 - serpin family D member 1 [Source:HGNC Symbol;Acc:HGNC:4838]
58. TGFBR3 ENSG00000069702 8468 0.855 0.855 - transforming growth factor beta receptor 3 [Source:HGNC Symbol;Acc:HGNC:11774]
59. MAFB ENSG00000204103 4840 0.855 0.855 - MAF bZIP transcription factor B [Source:HGNC Symbol;Acc:HGNC:6408]
60. CD151 ENSG00000177697 7219 0.851 0.851 - CD151 molecule (Raph blood group) [Source:HGNC Symbol;Acc:HGNC:1630]
61. DCN ENSG00000011465 12980 0.85 0.850 - decorin [Source:HGNC Symbol;Acc:HGNC:2705]
62. GADD45A ENSG00000116717 1743 0.849 0.849 - growth arrest and DNA damage inducible alpha [Source:HGNC Symbol;Acc:HGNC:4095]
63. LEFTY1 ENSG00000243709 302 0.848 0.848 - left-right determination factor 1 [Source:HGNC Symbol;Acc:HGNC:6552]
64. BCHE ENSG00000114200 4912 0.845 - 0.845 butyrylcholinesterase [Source:HGNC Symbol;Acc:HGNC:983]
65. NRIP2 ENSG00000053702 758 0.845 0.845 - nuclear receptor interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:23078]
66. MEG3 ENSG00000214548 19404 0.845 0.845 - maternally expressed 3 [Source:HGNC Symbol;Acc:HGNC:14575]
67. SLC9A3R1 ENSG00000109062 4036 0.844 0.844 - SLC9A3 regulator 1 [Source:HGNC Symbol;Acc:HGNC:11075]
68. PLAGL1 ENSG00000118495 6344 0.844 0.844 - PLAG1 like zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:9046]
69. PTPRD ENSG00000153707, ENSG00000282932 13409 0.842 - 0.842 protein tyrosine phosphatase, receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]
70. TARID ENSG00000227954 125 0.841 0.841 - TCF21 antisense RNA inducing promoter demethylation [Source:HGNC Symbol;Acc:HGNC:50506]
71. VEGFA ENSG00000112715 2715 0.839 0.839 - vascular endothelial growth factor A [Source:HGNC Symbol;Acc:HGNC:12680]
72. PNKD ENSG00000127838 3640 0.837 0.837 - PNKD, MBL domain containing [Source:HGNC Symbol;Acc:HGNC:9153]
73. RBPMS ENSG00000157110 10094 0.836 0.836 - RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
74. NEBL ENSG00000078114 534 0.832 0.832 - nebulette [Source:HGNC Symbol;Acc:HGNC:16932]
75. DDN ENSG00000181418 742 0.83 0.830 - dendrin [Source:HGNC Symbol;Acc:HGNC:24458]
76. ITGA3 ENSG00000005884 402 0.828 0.828 - integrin subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:6139]
77. MYRF ENSG00000124920 5866 0.827 0.827 - myelin regulatory factor [Source:HGNC Symbol;Acc:HGNC:1181]
78. CPXM1 ENSG00000088882 805 0.826 0.826 - carboxypeptidase X, M14 family member 1 [Source:HGNC Symbol;Acc:HGNC:15771]
79. SIPA1L2 ENSG00000116991 1975 0.826 - 0.826 signal induced proliferation associated 1 like 2 [Source:HGNC Symbol;Acc:HGNC:23800]
80. ARHGAP23 ENSG00000273780, ENSG00000275832 6311 0.825 0.825 - Rho GTPase activating protein 23 [Source:HGNC Symbol;Acc:HGNC:29293]
81. ENPEP ENSG00000138792 1005 0.825 0.825 - glutamyl aminopeptidase [Source:HGNC Symbol;Acc:HGNC:3355]
82. TRABD2B ENSG00000269113 1426 0.822 0.822 - TraB domain containing 2B [Source:HGNC Symbol;Acc:HGNC:44200]
83. WT1 ENSG00000184937 5369 0.822 0.822 - Wilms tumor 1 [Source:HGNC Symbol;Acc:HGNC:12796]
84. NFATC2 ENSG00000101096 898 0.82 0.820 - nuclear factor of activated T cells 2 [Source:HGNC Symbol;Acc:HGNC:7776]
85. KRT19 ENSG00000171345 1700 0.82 0.820 - keratin 19 [Source:HGNC Symbol;Acc:HGNC:6436]
86. CREB3L1 ENSG00000157613 755 0.819 0.819 - cAMP responsive element binding protein 3 like 1 [Source:HGNC Symbol;Acc:HGNC:18856]
87. SMAD6 ENSG00000137834 805 0.818 0.818 - SMAD family member 6 [Source:HGNC Symbol;Acc:HGNC:6772]
88. AHNAK ENSG00000124942 11800 0.816 0.816 - AHNAK nucleoprotein [Source:HGNC Symbol;Acc:HGNC:347]
89. CLDN5 ENSG00000184113 1322 0.816 0.816 - claudin 5 [Source:HGNC Symbol;Acc:HGNC:2047]
90. TRANK1 ENSG00000168016 5941 0.814 0.814 - tetratricopeptide repeat and ankyrin repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:29011]
91. GUCY1B3 1302 0.814 0.814 - guanylate cyclase 1, soluble, beta 3, transcript variant X5
92. STON2 ENSG00000140022 2642 0.811 0.811 - stonin 2 [Source:HGNC Symbol;Acc:HGNC:30652]
93. RUNX1T1 ENSG00000079102 8612 0.811 - 0.811 RUNX1 translocation partner 1 [Source:HGNC Symbol;Acc:HGNC:1535]
94. LAMC1 ENSG00000135862 20353 0.81 0.810 - laminin subunit gamma 1 [Source:HGNC Symbol;Acc:HGNC:6492]
95. APOBEC3C ENSG00000244509 3066 0.81 0.810 - apolipoprotein B mRNA editing enzyme catalytic subunit 3C [Source:HGNC Symbol;Acc:HGNC:17353]
96. GPC3 ENSG00000147257 34465 0.807 0.807 - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
97. SPINT2 ENSG00000167642 25745 0.806 0.806 - serine peptidase inhibitor, Kunitz type 2 [Source:HGNC Symbol;Acc:HGNC:11247]
98. PLAC1 ENSG00000170965 302 0.806 0.806 - placenta specific 1 [Source:HGNC Symbol;Acc:HGNC:9044]
99. AQP3 ENSG00000165272 137 0.805 0.805 - aquaporin 3 (Gill blood group) [Source:HGNC Symbol;Acc:HGNC:636]
100. FLRT3 ENSG00000125848 10097 0.805 - 0.805 fibronectin leucine rich transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:3762]

There are 159 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA