Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for VPS13A

Gene Name Gene ID Reads Annotation
VPS13A ENSG00000197969 1547 vacuolar protein sorting 13 homolog A [Source:HGNC Symbol;Acc:HGNC:1908]



Genes with expression patterns similar to VPS13A

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. VPS13A ENSG00000197969 1547 2 1.000 1.000 vacuolar protein sorting 13 homolog A [Source:HGNC Symbol;Acc:HGNC:1908]
2. SHISA3 ENSG00000178343 7060 0.87 - 0.870 shisa family member 3 [Source:HGNC Symbol;Acc:HGNC:25159]
3. PEG3 ENSG00000198300 11207 0.862 - 0.862 paternally expressed 3 [Source:HGNC Symbol;Acc:HGNC:8826]
4. SEMA6D ENSG00000137872 5938 0.838 - 0.838 semaphorin 6D [Source:HGNC Symbol;Acc:HGNC:16770]
5. PTPRD ENSG00000153707, ENSG00000282932 13409 0.832 - 0.832 protein tyrosine phosphatase, receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]
6. NFIB ENSG00000147862 8306 0.832 - 0.832 nuclear factor I B [Source:HGNC Symbol;Acc:HGNC:7785]
7. ZFYVE16 ENSG00000039319 4030 0.827 - 0.827 zinc finger FYVE-type containing 16 [Source:HGNC Symbol;Acc:HGNC:20756]
8. GATA6 ENSG00000141448 3614 0.827 - 0.827 GATA binding protein 6 [Source:HGNC Symbol;Acc:HGNC:4174]
9. CDH11 ENSG00000140937 5411 0.825 - 0.825 cadherin 11 [Source:HGNC Symbol;Acc:HGNC:1750]
10. FSTL5 ENSG00000168843 553 0.816 - 0.816 follistatin like 5 [Source:HGNC Symbol;Acc:HGNC:21386]
11. OXR1 ENSG00000164830 3153 0.808 - 0.808 oxidation resistance 1 [Source:HGNC Symbol;Acc:HGNC:15822]
12. TCAF1 ENSG00000198420 4902 0.803 - 0.803 TRPM8 channel associated factor 1 [Source:HGNC Symbol;Acc:HGNC:22201]
13. GPC6 ENSG00000183098 5564 0.802 - 0.802 glypican 6 [Source:HGNC Symbol;Acc:HGNC:4454]
14. TAB2 ENSG00000055208 3548 0.799 - 0.799 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17075]
15. CDH2 ENSG00000170558 5035 0.797 - 0.797 cadherin 2 [Source:HGNC Symbol;Acc:HGNC:1759]
16. GUCY1A3 1501 0.797 - 0.797 guanylate cyclase 1, soluble, alpha 3, transcript variant X7
17. CGGBP1 ENSG00000163320 8529 0.797 - 0.797 CGG triplet repeat binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1888]
18. SPIN1 ENSG00000106723 7283 0.795 - 0.795 spindlin 1 [Source:HGNC Symbol;Acc:HGNC:11243]
19. AFF4 ENSG00000072364 3974 0.793 - 0.793 AF4/FMR2 family member 4 [Source:HGNC Symbol;Acc:HGNC:17869]
20. MDFIC ENSG00000135272 3094 0.79 - 0.790 MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
21. NEK7 ENSG00000151414 969 0.79 - 0.790 NIMA related kinase 7 [Source:HGNC Symbol;Acc:HGNC:13386]
22. ZMYM2 ENSG00000121741 4271 0.789 - 0.789 zinc finger MYM-type containing 2 [Source:HGNC Symbol;Acc:HGNC:12989]
23. SUCO ENSG00000094975 6635 0.787 - 0.787 SUN domain containing ossification factor [Source:HGNC Symbol;Acc:HGNC:1240]
24. LPAR1 ENSG00000198121 3173 0.786 - 0.786 lysophosphatidic acid receptor 1 [Source:HGNC Symbol;Acc:HGNC:3166]
25. ZEB2 ENSG00000169554 6472 0.785 - 0.785 zinc finger E-box binding homeobox 2 [Source:HGNC Symbol;Acc:HGNC:14881]
26. C3orf58 ENSG00000181744 3754 0.781 - 0.781 chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
27. PGAP1 ENSG00000197121 3543 0.781 - 0.781 post-GPI attachment to proteins 1 [Source:HGNC Symbol;Acc:HGNC:25712]
28. TMEM263 ENSG00000151135 3056 0.777 - 0.777 transmembrane protein 263 [Source:HGNC Symbol;Acc:HGNC:28281]
29. EIF4A2 ENSG00000156976 16625 0.775 - 0.775 eukaryotic translation initiation factor 4A2 [Source:HGNC Symbol;Acc:HGNC:3284]
30. CCNG2 ENSG00000138764 6322 0.775 - 0.775 cyclin G2 [Source:HGNC Symbol;Acc:HGNC:1593]
31. ADAM10 ENSG00000137845 5981 0.773 - 0.773 ADAM metallopeptidase domain 10 [Source:HGNC Symbol;Acc:HGNC:188]
32. MEIS2 ENSG00000134138 9835 0.77 - 0.770 Meis homeobox 2 [Source:HGNC Symbol;Acc:HGNC:7001]
33. USP53 ENSG00000145390 1240 0.767 - 0.767 ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:HGNC:29255]
34. FLRT3 ENSG00000125848 10097 0.766 - 0.766 fibronectin leucine rich transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:3762]
35. SIPA1L2 ENSG00000116991 1975 0.765 - 0.765 signal induced proliferation associated 1 like 2 [Source:HGNC Symbol;Acc:HGNC:23800]
36. ZFPM2 ENSG00000169946 826 0.763 - 0.763 zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
37. FAT4 ENSG00000196159 3266 0.763 - 0.763 FAT atypical cadherin 4 [Source:HGNC Symbol;Acc:HGNC:23109]
38. TWSG1 ENSG00000128791 2598 0.762 - 0.762 twisted gastrulation BMP signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:12429]
39. ZBTB44 ENSG00000196323 6946 0.762 - 0.762 zinc finger and BTB domain containing 44 [Source:HGNC Symbol;Acc:HGNC:25001]
40. RFX7 ENSG00000181827 5171 0.761 - 0.761 regulatory factor X7 [Source:HGNC Symbol;Acc:HGNC:25777]
41. LMAN1 ENSG00000074695 7421 0.76 - 0.760 lectin, mannose binding 1 [Source:HGNC Symbol;Acc:HGNC:6631]
42. RAP2A ENSG00000125249 1730 0.759 - 0.759 RAP2A, member of RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9861]
43. MALAT1 ENSG00000251562 82061 0.758 - 0.758 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
44. TM9SF3 ENSG00000077147 8041 0.757 - 0.757 transmembrane 9 superfamily member 3 [Source:HGNC Symbol;Acc:HGNC:21529]
45. GOLGA7 ENSG00000147533 6039 0.756 - 0.756 golgin A7 [Source:HGNC Symbol;Acc:HGNC:24876]
46. RBMS3 ENSG00000144642 3622 0.755 - 0.755 RNA binding motif single stranded interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:13427]
47. FN1 ENSG00000115414 18367 0.754 - 0.754 fibronectin 1 [Source:HGNC Symbol;Acc:HGNC:3778]
48. DSG2 ENSG00000046604 4179 0.753 - 0.753 desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
49. CHMP5 ENSG00000086065 12052 0.752 - 0.752 charged multivesicular body protein 5 [Source:HGNC Symbol;Acc:HGNC:26942]
50. MBTD1 ENSG00000011258 2176 0.75 - 0.750 mbt domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19866]
51. ZFHX4 ENSG00000091656 12505 0.75 - 0.750 zinc finger homeobox 4 [Source:HGNC Symbol;Acc:HGNC:30939]
52. RHOBTB3 ENSG00000164292 20064 0.749 - 0.749 Rho related BTB domain containing 3 [Source:HGNC Symbol;Acc:HGNC:18757]
53. PCDH9 ENSG00000184226 1058 0.749 - 0.749 protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661]
54. IGFBP3 ENSG00000146674 2312 0.748 - 0.748 insulin like growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:5472]
55. PPP3CA ENSG00000138814 2616 0.747 - 0.747 protein phosphatase 3 catalytic subunit alpha [Source:HGNC Symbol;Acc:HGNC:9314]
56. PDCD4 ENSG00000150593 5711 0.746 - 0.746 programmed cell death 4 [Source:HGNC Symbol;Acc:HGNC:8763]
57. ETNK1 ENSG00000139163 6151 0.746 - 0.746 ethanolamine kinase 1 [Source:HGNC Symbol;Acc:HGNC:24649]
58. KIAA1551 ENSG00000174718 2689 0.746 - 0.746 KIAA1551 [Source:HGNC Symbol;Acc:HGNC:25559]
59. SMARCA1 ENSG00000102038 8738 0.745 - 0.745 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:HGNC Symbol;Acc:HGNC:11097]
60. MAP9 ENSG00000164114 2246 0.745 - 0.745 microtubule associated protein 9 [Source:HGNC Symbol;Acc:HGNC:26118]
61. LATS1 ENSG00000131023 5302 0.744 - 0.744 large tumor suppressor kinase 1 [Source:HGNC Symbol;Acc:HGNC:6514]
62. GULP1 ENSG00000144366 2903 0.743 - 0.743 GULP, engulfment adaptor PTB domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18649]
63. HSPA13 ENSG00000155304 2465 0.743 - 0.743 heat shock protein family A (Hsp70) member 13 [Source:HGNC Symbol;Acc:HGNC:11375]
64. ZHX1 ENSG00000165156 3470 0.743 - 0.743 zinc fingers and homeoboxes 1 [Source:HGNC Symbol;Acc:HGNC:12871]
65. ANKRD12 ENSG00000101745 7317 0.742 - 0.742 ankyrin repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:29135]
66. ADD3 ENSG00000148700 7732 0.741 - 0.741 adducin 3 [Source:HGNC Symbol;Acc:HGNC:245]
67. ANO6 ENSG00000177119 1116 0.741 - 0.741 anoctamin 6 [Source:HGNC Symbol;Acc:HGNC:25240]
68. MOB1B ENSG00000173542 2576 0.74 - 0.740 MOB kinase activator 1B [Source:HGNC Symbol;Acc:HGNC:29801]
69. ZNF624 ENSG00000197566 1210 0.74 - 0.740 zinc finger protein 624 [Source:HGNC Symbol;Acc:HGNC:29254]
70. Sep-07 Sep-07 16686 0.74 - 0.740
71. SPIN4 ENSG00000186767 2851 0.739 - 0.739 spindlin family member 4 [Source:HGNC Symbol;Acc:HGNC:27040]
72. PDE10A ENSG00000112541 1934 0.739 - 0.739 phosphodiesterase 10A [Source:HGNC Symbol;Acc:HGNC:8772]
73. RUNX1T1 ENSG00000079102 8612 0.739 - 0.739 RUNX1 translocation partner 1 [Source:HGNC Symbol;Acc:HGNC:1535]
74. TMEM123 ENSG00000152558 7933 0.739 - 0.739 transmembrane protein 123 [Source:HGNC Symbol;Acc:HGNC:30138]
75. SENP6 ENSG00000112701 6072 0.737 - 0.737 SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
76. CELF2 ENSG00000048740 5291 0.735 - 0.735 CUGBP Elav-like family member 2 [Source:HGNC Symbol;Acc:HGNC:2550]
77. BCHE ENSG00000114200 4912 0.735 - 0.735 butyrylcholinesterase [Source:HGNC Symbol;Acc:HGNC:983]
78. ATP2B4 ENSG00000058668 5432 0.734 - 0.734 ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
79. ATRX ENSG00000085224 27422 0.734 - 0.734 ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
80. ZNF92 ENSG00000146757 1829 0.734 - 0.734 zinc finger protein 92 [Source:HGNC Symbol;Acc:HGNC:13168]
81. MIB1 ENSG00000101752 6855 0.732 - 0.732 mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
82. TRIM23 ENSG00000113595 1251 0.73 - 0.730 tripartite motif containing 23 [Source:HGNC Symbol;Acc:HGNC:660]
83. SERINC1 ENSG00000111897 6002 0.729 - 0.729 serine incorporator 1 [Source:HGNC Symbol;Acc:HGNC:13464]
84. GABPA ENSG00000154727 1493 0.729 - 0.729 GA binding protein transcription factor subunit alpha [Source:HGNC Symbol;Acc:HGNC:4071]
85. AASDHPPT ENSG00000149313 4278 0.728 - 0.728 aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:HGNC Symbol;Acc:HGNC:14235]
86. ARHGAP28 ENSG00000088756 4386 0.727 - 0.727 Rho GTPase activating protein 28 [Source:HGNC Symbol;Acc:HGNC:25509]
87. RBM12 ENSG00000244462 9908 0.727 - 0.727 RNA binding motif protein 12 [Source:HGNC Symbol;Acc:HGNC:9898]
88. KRCC1 ENSG00000172086 2251 0.726 - 0.726 lysine rich coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:28039]
89. POLR2B ENSG00000047315 9596 0.726 - 0.726 RNA polymerase II subunit B [Source:HGNC Symbol;Acc:HGNC:9188]
90. ITGAV ENSG00000138448 3664 0.726 - 0.726 integrin subunit alpha V [Source:HGNC Symbol;Acc:HGNC:6150]
91. BZW1 ENSG00000082153 13430 0.726 - 0.726 basic leucine zipper and W2 domains 1 [Source:HGNC Symbol;Acc:HGNC:18380]
92. GRIA4 ENSG00000152578 1876 0.725 - 0.725 glutamate ionotropic receptor AMPA type subunit 4 [Source:HGNC Symbol;Acc:HGNC:4574]
93. CNTN4 ENSG00000144619 2198 0.724 - 0.724 contactin 4 [Source:HGNC Symbol;Acc:HGNC:2174]
94. ZNF518A ENSG00000177853 2730 0.724 - 0.724 zinc finger protein 518A [Source:HGNC Symbol;Acc:HGNC:29009]
95. PIKFYVE ENSG00000115020 1206 0.723 - 0.723 phosphoinositide kinase, FYVE-type zinc finger containing [Source:HGNC Symbol;Acc:HGNC:23785]
96. EIF3A ENSG00000107581 10837 0.722 - 0.722 eukaryotic translation initiation factor 3 subunit A [Source:HGNC Symbol;Acc:HGNC:3271]
97. SIKE1 ENSG00000052723 2576 0.722 - 0.722 suppressor of IKBKE 1 [Source:HGNC Symbol;Acc:HGNC:26119]
98. PCNP ENSG00000081154 9215 0.721 - 0.721 PEST proteolytic signal containing nuclear protein [Source:HGNC Symbol;Acc:HGNC:30023]
99. TIA1 ENSG00000116001 14798 0.72 - 0.720 TIA1 cytotoxic granule associated RNA binding protein [Source:HGNC Symbol;Acc:HGNC:11802]
100. LINGO2 ENSG00000174482 214 0.719 - 0.719 leucine rich repeat and Ig domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21207]

There are 39 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA