Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDH4

Gene Name Gene ID Reads Annotation
CDH4 ENSG00000179242, ENSG00000280641 1069 cadherin 4 [Source:HGNC Symbol;Acc:HGNC:1763]



Genes with expression patterns similar to CDH4

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. CDH4 ENSG00000179242, ENSG00000280641 1069 2 1.000 1.000 cadherin 4 [Source:HGNC Symbol;Acc:HGNC:1763]
2. CKB ENSG00000166165 54181 1.729 0.849 0.880 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
3. RHBDL3 ENSG00000141314 2571 1.716 0.826 0.890 rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]
4. CELSR2 ENSG00000143126 3566 1.695 0.786 0.909 cadherin EGF LAG seven-pass G-type receptor 2 [Source:HGNC Symbol;Acc:HGNC:3231]
5. TTYH1 ENSG00000167614, ENSG00000275650, ENSG00000276537, ENSG00000276887 2414 1.694 0.815 0.879 tweety family member 1 [Source:HGNC Symbol;Acc:HGNC:13476]
6. HES5 ENSG00000197921, ENSG00000273529 9293 1.685 0.764 0.921 hes family bHLH transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:19764]
7. PDPN ENSG00000162493 5095 1.684 0.819 0.865 podoplanin [Source:HGNC Symbol;Acc:HGNC:29602]
8. FAM181A ENSG00000140067, ENSG00000273533 1757 1.66 0.810 0.850 family with sequence similarity 181 member A [Source:HGNC Symbol;Acc:HGNC:20491]
9. SRGAP3 ENSG00000196220 5297 1.66 0.823 0.837 SLIT-ROBO Rho GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:19744]
10. POU3F2 ENSG00000184486 2683 1.655 0.794 0.861 POU class 3 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9215]
11. DPYSL5 ENSG00000157851 6855 1.649 0.821 0.828 dihydropyrimidinase like 5 [Source:HGNC Symbol;Acc:HGNC:20637]
12. RND2 ENSG00000108830 3761 1.639 0.769 0.870 Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]
13. TSPAN18 ENSG00000157570 9391 1.636 0.813 0.823 tetraspanin 18 [Source:HGNC Symbol;Acc:HGNC:20660]
14. LINC00461 ENSG00000245526 4465 1.634 0.803 0.831 long intergenic non-protein coding RNA 461 [Source:HGNC Symbol;Acc:HGNC:42810]
15. SOX3 ENSG00000134595 5297 1.633 0.769 0.864 SRY-box 3 [Source:HGNC Symbol;Acc:HGNC:11199]
16. MIAT ENSG00000225783 2977 1.628 0.844 0.784 myocardial infarction associated transcript [Source:HGNC Symbol;Acc:HGNC:33425]
17. JAM2 ENSG00000154721 1771 1.627 0.794 0.833 junctional adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:14686]
18. DTX4 ENSG00000110042 2639 1.624 0.766 0.858 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
19. MIR124-2HG ENSG00000254377 940 1.618 0.819 0.799 MIR124-2 host gene [Source:HGNC Symbol;Acc:HGNC:48723]
20. IGFBPL1 ENSG00000137142 3283 1.613 0.804 0.809 insulin like growth factor binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:20081]
21. NRARP ENSG00000198435 1658 1.611 0.741 0.870 NOTCH regulated ankyrin repeat protein [Source:HGNC Symbol;Acc:HGNC:33843]
22. RGS16 ENSG00000143333 2239 1.609 0.839 0.770 regulator of G protein signaling 16 [Source:HGNC Symbol;Acc:HGNC:9997]
23. DLL1 ENSG00000198719, ENSG00000275555 1642 1.603 0.759 0.844 delta like canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2908]
24. FGFR3 ENSG00000068078 2862 1.601 0.754 0.847 fibroblast growth factor receptor 3 [Source:HGNC Symbol;Acc:HGNC:3690]
25. SOX2 ENSG00000181449 19791 1.599 0.756 0.843 SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
26. AGO1 ENSG00000092847 2525 1.596 0.782 0.814 argonaute 1, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3262]
27. KLHDC8A ENSG00000162873 2265 1.593 0.795 0.798 kelch domain containing 8A [Source:HGNC Symbol;Acc:HGNC:25573]
28. SYT11 ENSG00000132718 3832 1.591 0.791 0.800 synaptotagmin 11 [Source:HGNC Symbol;Acc:HGNC:19239]
29. HES6 ENSG00000144485 4284 1.581 0.796 0.785 hes family bHLH transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:18254]
30. NOVA1 ENSG00000139910 5990 1.58 0.822 0.758 NOVA alternative splicing regulator 1 [Source:HGNC Symbol;Acc:HGNC:7886]
31. ASRGL1 ENSG00000162174 4293 1.562 0.755 0.807 asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
32. CCDC85C ENSG00000205476 3808 1.558 0.713 0.845 coiled-coil domain containing 85C [Source:HGNC Symbol;Acc:HGNC:35459]
33. CXCR4 ENSG00000121966 4708 1.553 0.809 0.744 C-X-C motif chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:2561]
34. NES ENSG00000132688 20034 1.547 0.767 0.780 nestin [Source:HGNC Symbol;Acc:HGNC:7756]
35. MYCL ENSG00000116990 1128 1.546 0.709 0.837 MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
36. SLITRK2 ENSG00000185985 905 1.539 0.776 0.763 SLIT and NTRK like family member 2 [Source:HGNC Symbol;Acc:HGNC:13449]
37. RGMA ENSG00000182175 3405 1.53 0.748 0.782 repulsive guidance molecule BMP co-receptor a [Source:HGNC Symbol;Acc:HGNC:30308]
38. LINC00925 LINC00925 517 1.529 0.768 0.761
39. MSI1 ENSG00000135097 6935 1.528 0.710 0.818 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
40. LINC01158 1332 1.522 0.714 0.808 long intergenic non-protein coding RNA 1158, transcript variant 4
41. TMEM176B ENSG00000106565 1876 1.514 0.747 0.767 transmembrane protein 176B [Source:HGNC Symbol;Acc:HGNC:29596]
42. LRIG1 ENSG00000144749, ENSG00000282243 1639 1.511 0.705 0.806 leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]
43. HS6ST1 ENSG00000136720 4974 1.496 0.708 0.788 heparan sulfate 6-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:5201]
44. CTNND2 ENSG00000169862 1640 1.472 0.770 0.702 catenin delta 2 [Source:HGNC Symbol;Acc:HGNC:2516]
45. TOX3 ENSG00000103460 1758 1.471 0.705 0.766 TOX high mobility group box family member 3 [Source:HGNC Symbol;Acc:HGNC:11972]
46. CRABP1 ENSG00000166426 2178 1.456 0.705 0.751 cellular retinoic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2338]
47. DPYSL2 ENSG00000092964 47074 1.435 0.734 0.701 dihydropyrimidinase like 2 [Source:HGNC Symbol;Acc:HGNC:3014]
48. ENPP2 ENSG00000136960 3320 1.435 0.721 0.714 ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:HGNC Symbol;Acc:HGNC:3357]
49. CNIH2 ENSG00000174871 3037 1.41 0.705 0.705 cornichon family AMPA receptor auxiliary protein 2 [Source:HGNC Symbol;Acc:HGNC:28744]
50. ZIC4 ENSG00000174963 2667 1.408 0.703 0.705 Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]
51. HOXB-AS3 ENSG00000233101 1776 0.863 - 0.863 HOXB cluster antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40283]
52. FZD3 ENSG00000104290 11650 0.863 0.863 - frizzled class receptor 3 [Source:HGNC Symbol;Acc:HGNC:4041]
53. TUBB2B ENSG00000137285 35642 0.856 0.856 - tubulin beta 2B class IIb [Source:HGNC Symbol;Acc:HGNC:30829]
54. CSPG5 ENSG00000114646 558 0.853 - 0.853 chondroitin sulfate proteoglycan 5 [Source:HGNC Symbol;Acc:HGNC:2467]
55. LOC100240734 1898 0.849 - 0.849 uncharacterized LOC100240734
56. TAGLN3 ENSG00000144834 10185 0.842 0.842 - transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
57. MAP1B ENSG00000131711 44568 0.841 0.841 - microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]
58. NOTCH1 ENSG00000148400 5516 0.834 - 0.834 notch 1 [Source:HGNC Symbol;Acc:HGNC:7881]
59. PTPRZ1 ENSG00000106278 1326 0.833 - 0.833 protein tyrosine phosphatase, receptor type Z1 [Source:HGNC Symbol;Acc:HGNC:9685]
60. SEMA5B ENSG00000082684 2716 0.831 - 0.831 semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
61. Sep-03 Sep-03 2608 0.83 0.830 -
62. SCUBE2 ENSG00000175356 1730 0.828 - 0.828 signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
63. LFNG ENSG00000106003 1260 0.828 - 0.828 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:6560]
64. NAT8L ENSG00000185818 278 0.817 - 0.817 N-acetyltransferase 8 like [Source:HGNC Symbol;Acc:HGNC:26742]
65. PAX6 ENSG00000007372 3710 0.816 - 0.816 paired box 6 [Source:HGNC Symbol;Acc:HGNC:8620]
66. CALM1 ENSG00000198668 24434 0.814 0.814 - calmodulin 1 [Source:HGNC Symbol;Acc:HGNC:1442]
67. NUAK2 ENSG00000163545 538 0.813 - 0.813 NUAK family kinase 2 [Source:HGNC Symbol;Acc:HGNC:29558]
68. GLDC ENSG00000178445 513 0.812 - 0.812 glycine decarboxylase [Source:HGNC Symbol;Acc:HGNC:4313]
69. SOX21 ENSG00000125285 209 0.806 - 0.806 SRY-box 21 [Source:HGNC Symbol;Acc:HGNC:11197]
70. ZBTB16 ENSG00000109906 287 0.806 - 0.806 zinc finger and BTB domain containing 16 [Source:HGNC Symbol;Acc:HGNC:12930]
71. ROBO3 ENSG00000154134 1085 0.805 - 0.805 roundabout guidance receptor 3 [Source:HGNC Symbol;Acc:HGNC:13433]
72. SLC1A2 ENSG00000110436 1231 0.802 - 0.802 solute carrier family 1 member 2 [Source:HGNC Symbol;Acc:HGNC:10940]
73. FLJ12825 ENSG00000248265 822 0.797 - 0.797 uncharacterized LOC440101 [Source:NCBI gene;Acc:440101]
74. DLL3 ENSG00000090932 826 0.796 0.796 - delta like canonical Notch ligand 3 [Source:HGNC Symbol;Acc:HGNC:2909]
75. RGS20 ENSG00000147509 282 0.795 - 0.795 regulator of G protein signaling 20 [Source:HGNC Symbol;Acc:HGNC:14600]
76. GDI1 ENSG00000203879 6108 0.791 0.791 - GDP dissociation inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:4226]
77. NELL2 ENSG00000184613 1519 0.787 0.787 - neural EGFL like 2 [Source:HGNC Symbol;Acc:HGNC:7751]
78. WSCD1 ENSG00000179314 1121 0.786 - 0.786 WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
79. TKTL1 ENSG00000007350 1212 0.785 - 0.785 transketolase like 1 [Source:HGNC Symbol;Acc:HGNC:11835]
80. SLC2A1 ENSG00000117394 2892 0.784 - 0.784 solute carrier family 2 member 1 [Source:HGNC Symbol;Acc:HGNC:11005]
81. HOXB9 ENSG00000170689 2051 0.784 - 0.784 homeobox B9 [Source:HGNC Symbol;Acc:HGNC:5120]
82. NEUROG1 ENSG00000181965 1244 0.783 - 0.783 neurogenin 1 [Source:HGNC Symbol;Acc:HGNC:7764]
83. IRX3 ENSG00000177508 7140 0.782 - 0.782 iroquois homeobox 3 [Source:HGNC Symbol;Acc:HGNC:14360]
84. OLFM1 ENSG00000130558 1162 0.78 0.780 - olfactomedin 1 [Source:HGNC Symbol;Acc:HGNC:17187]
85. UCP2 ENSG00000175567 1141 0.78 - 0.780 uncoupling protein 2 [Source:HGNC Symbol;Acc:HGNC:12518]
86. FGF13 ENSG00000129682 1528 0.78 0.780 - fibroblast growth factor 13 [Source:HGNC Symbol;Acc:HGNC:3670]
87. NPAS3 ENSG00000151322 1043 0.78 - 0.780 neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
88. ARL4A ENSG00000122644 3071 0.778 - 0.778 ADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]
89. MAP2 ENSG00000078018 3573 0.776 0.776 - microtubule associated protein 2 [Source:HGNC Symbol;Acc:HGNC:6839]
90. RASSF2 ENSG00000101265 1157 0.775 - 0.775 Ras association domain family member 2 [Source:HGNC Symbol;Acc:HGNC:9883]
91. NHLH2 ENSG00000177551 1191 0.774 0.774 - nescient helix-loop-helix 2 [Source:HGNC Symbol;Acc:HGNC:7818]
92. TUBA1A ENSG00000167552 83799 0.774 0.774 - tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
93. FAM181B ENSG00000182103 461 0.771 - 0.771 family with sequence similarity 181 member B [Source:HGNC Symbol;Acc:HGNC:28512]
94. SYT2 ENSG00000143858 2364 0.771 - 0.771 synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
95. ARL4C ENSG00000188042 5437 0.771 - 0.771 ADP ribosylation factor like GTPase 4C [Source:HGNC Symbol;Acc:HGNC:698]
96. ZBTB18 ENSG00000179456 2430 0.77 0.770 - zinc finger and BTB domain containing 18 [Source:HGNC Symbol;Acc:HGNC:13030]
97. PAK3 ENSG00000077264 890 0.77 0.770 - p21 (RAC1) activated kinase 3 [Source:HGNC Symbol;Acc:HGNC:8592]
98. TMEM158 ENSG00000249992 678 0.768 0.768 - transmembrane protein 158 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:30293]
99. RNF165 ENSG00000141622 1865 0.765 0.765 - ring finger protein 165 [Source:HGNC Symbol;Acc:HGNC:31696]
100. SOX1 ENSG00000182968 1339 0.764 - 0.764 SRY-box 1 [Source:HGNC Symbol;Acc:HGNC:11189]

There are 101 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA