Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Chicken_E4_posterior_slice_1, section s36.

Sample reads: 124,246. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 10332.35 83166.76
2. EEF1A EEF1A 1810.79 14575.34
3. ENSGALG00000018384 ENSGALG00000018384 1109.94 8934.09
4. RPS3A ENSGALG00000010077 1007.67 8110.90 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
5. MT-ATP6 MT-ATP6 962.55 7747.72
6. MT-CO1 MT-CO1 959.54 7723.49
7. RPL35A ENSGALG00000007611, ENSGALG00000041230 950.52 7650.89 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
8. RPS10 ENSGALG00000002813 896.37 7215.03 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
9. RPL8 ENSGALG00000016232 694.84 5592.88 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
10. RPLP1 ENSGALG00000030878 688.82 5544.42 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
11. MT-ND4 MT-ND4 685.82 5520.28
12. RPS23 ENSGALG00000015617 664.76 5350.76 ribosomal protein S23
13. MT-CYB MT-CYB 619.64 4987.58
14. RPS8 ENSGALG00000010124 616.63 4963.35 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
15. RPL27A ENSGALG00000005948 532.41 4285.45 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
16. RAN ENSGALG00000002569 523.39 4212.85 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
17. TMSB4X ENSGALG00000026383 523.39 4212.85 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
18. RPL7A ENSGALG00000003197 514.36 4140.17 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
19. ENSGALG00000018386 ENSGALG00000018386 511.35 4115.94
20. RPL19 ENSGALG00000001658 496.31 3994.88 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
21. RPL27 ENSGALG00000002837 496.31 3994.88 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
22. MT-ND3 MT-ND3 493.31 3970.73
23. RPS21 ENSGALG00000005338 469.24 3776.99 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
24. RPS6 ENSGALG00000015082 454.20 3655.93 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
25. GAPDH ENSGALG00000014442 451.19 3631.70 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
26. RPS4 RPS4 448.19 3607.55
27. gga-mir-3533 ENSGALG00000027736 448.19 3607.55 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
28. RPL29 ENSGALG00000026978 433.15 3486.49 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
29. RPS12 ENSGALG00000013990 424.12 3413.81 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
30. RPL6 ENSGALG00000004818 421.11 3389.58 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
31. RPL32 ENSGALG00000027142 412.09 3316.98 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
32. RPS16 ENSGALG00000026490 412.09 3316.98 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
33. RPL26 RPL26 403.07 3244.38
34. RPL4 ENSGALG00000007711 397.05 3195.92 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
35. RPL38 ENSGALG00000001465 391.04 3147.54 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
36. gga-mir-3527 gga-mir-3527 391.04 3147.54
37. MT-ND5 MT-ND5 388.03 3123.32
38. RPL21 ENSGALG00000027035 388.03 3123.32 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
39. TXN ENSGALG00000015704 376.00 3026.48 thioredoxin [Source:NCBI gene;Acc:396437]
40. RPL13 ENSGALG00000006179 366.97 2953.80 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
41. RPL36AL ENSGALG00000004952 363.96 2929.57 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
42. ENSGALG00000002696 ENSGALG00000002696 360.96 2905.43
43. RPL23A ENSGALG00000003966 357.95 2881.20 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
44. RPL35 ENSGALG00000035677 351.93 2832.74 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
45. RPSA 348.92 2808.51 ribosomal protein SA
46. DYL1 ENSGALG00000007153 342.91 2760.14 dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
47. RPS14 ENSGALG00000004588 342.91 2760.14 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
48. RPS15A ENSGALG00000006771 342.91 2760.14 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
49. RPL23 ENSGALG00000001634 336.89 2711.68 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
50. RPL5 ENSGALG00000005922 333.88 2687.45 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
51. RPLP0 ENSGALG00000023294 324.86 2614.85 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
52. RPS7 ENSGALG00000016392 321.85 2590.62 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
53. TCEB3 ENSGALG00000034625 312.83 2518.02 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
54. RPL15 ENSGALG00000011290 309.82 2493.79 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
55. HMGN5 ENSGALG00000007131 303.80 2445.34 high mobility group nucleosome binding domain 5, transcript variant X1
56. RPL18A 303.80 2445.34 ribosomal protein L18a
57. CIRBP ENSGALG00000030918 294.78 2372.73 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
58. MDK ENSGALG00000008367 294.78 2372.73 midkine [Source:NCBI gene;Acc:423196]
59. HSPA8 ENSGALG00000006512 291.77 2348.50 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
60. RPL37 ENSGALG00000014833 288.76 2324.28 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
61. RPS29 ENSGALG00000012229 282.75 2275.90 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
62. H3-IX H3-IX 276.73 2227.44
63. RPS3 ENSGALG00000017330 276.73 2227.44 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
64. HSP90B1 ENSGALG00000033789 273.72 2203.22 heat shock protein 90 beta family member 1 [Source:NCBI gene;Acc:374163]
65. RPL14 ENSGALG00000043379 273.72 2203.22 ribosomal protein L14
66. RPL7 ENSGALG00000035252 267.71 2154.84 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
67. RPS2 ENSGALG00000005490 267.71 2154.84 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
68. HBZ ENSGALG00000023740 264.70 2130.61 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
69. PSMC6 ENSGALG00000012408 261.69 2106.39 proteasome 26S subunit, ATPase 6 [Source:NCBI gene;Acc:423586]
70. RPS28 ENSGALG00000024398 261.69 2106.39 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
71. CRHOA CRHOA 258.68 2082.16
72. UBB ENSGALG00000004509 255.68 2058.01 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
73. RPLP2 ENSGALG00000034811 249.66 2009.55 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
74. RPS11 ENSGALG00000017299 237.63 1912.72 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
75. RPS15 ENSGALG00000015195 237.63 1912.72 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
76. ENO1 ENSGALG00000002377 228.61 1840.12 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
77. RPL12 ENSGALG00000008806 228.61 1840.12 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
78. RPL31 ENSGALG00000016775 228.61 1840.12 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
79. ANP32B ENSGALG00000037483 225.60 1815.89 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
80. RPL9 ENSGALG00000000150 225.60 1815.89 ribosomal protein L9 [Source:NCBI gene;Acc:425468]
81. RPS13 ENSGALG00000006096 225.60 1815.89 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
82. RPS25 ENSGALG00000007699 225.60 1815.89 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
83. SNRPD1 ENSGALG00000041334 225.60 1815.89 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
84. RPL10A ENSGALG00000002644 216.57 1743.21 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
85. CNN3 ENSGALG00000005597 213.57 1719.06 Gallus gallus calponin 3 (CNN3), mRNA. [Source:RefSeq mRNA;Acc:NM_001354671]
86. COX7C ENSGALG00000027963 207.55 1670.60 cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
87. EEF1D 207.55 1670.60 eukaryotic translation elongation factor 1 delta, transcript variant X13
88. STMN1 ENSGALG00000001475 207.55 1670.60 stathmin 1 [Source:NCBI gene;Acc:396057]
89. ENSGALG00000028992 ENSGALG00000028992 201.53 1622.15
90. RPS20 ENSGALG00000014432 201.53 1622.15 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
91. NUCKS1 ENSGALG00000000708 192.51 1549.54 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:NCBI gene;Acc:404775]
92. RPS24 ENSGALG00000004871 192.51 1549.54 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
93. MT-ND6 MT-ND6 189.50 1525.32
94. RPL24 ENSGALG00000015339 186.49 1501.09 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
95. HSP90AA1 ENSGALG00000033212 183.49 1476.94 heat shock protein 90 alpha family class A member 1 [Source:NCBI gene;Acc:423463]
96. PHB2 ENSGALG00000014567 183.49 1476.94 prohibitin 2 [Source:NCBI gene;Acc:771124]
97. ENSGALG00000028649 ENSGALG00000028649 180.48 1452.71
98. BLMH ENSGALG00000004259 177.47 1428.48 bleomycin hydrolase [Source:NCBI gene;Acc:395996]
99. SET ENSGALG00000004701 177.47 1428.48 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
100. EIF2S1 ENSGALG00000009565 174.46 1404.26 eukaryotic translation initiation factor 2 subunit alpha [Source:NCBI gene;Acc:423279]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA