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Experiment Chicken_E4_anterior_slice_1, section s39.

Sample reads: 152,195. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4972.87 32677.10
2. EEF1A EEF1A 2100.84 13804.78
3. MT-ATP6 MT-ATP6 1675.35 11008.85
4. RPS10 ENSGALG00000002813 1662.06 10921.52 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
5. ENSGALG00000018384 ENSGALG00000018384 1529.09 10047.77
6. RPLP1 ENSGALG00000030878 1462.61 9610.92 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
7. MT-ND3 MT-ND3 1209.98 7950.87
8. RPS6 ENSGALG00000015082 1209.98 7950.87 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
9. RPS23 ENSGALG00000015617 1156.79 7601.35 ribosomal protein S23
10. MT-CO1 MT-CO1 1090.31 7164.51
11. RPL8 ENSGALG00000016232 1090.31 7164.51 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
12. RPSA 1050.42 6902.39 ribosomal protein SA
13. RPS8 ENSGALG00000010124 983.94 6465.54 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
14. gga-mir-3527 gga-mir-3527 970.64 6378.15
15. RPLP0 ENSGALG00000023294 957.34 6290.75 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
16. ENSGALG00000018386 ENSGALG00000018386 944.05 6203.42
17. GAPDH ENSGALG00000014442 944.05 6203.42 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
18. RPL32 ENSGALG00000027142 944.05 6203.42 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
19. RPL35A ENSGALG00000007611, ENSGALG00000041230 917.45 6028.63 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
20. RPL23A ENSGALG00000003966 904.16 5941.30 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
21. RPS15 ENSGALG00000015195 904.16 5941.30 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
22. RPS2 ENSGALG00000005490 890.86 5853.91 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
23. RPL19 ENSGALG00000001658 877.57 5766.58 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
24. MDK ENSGALG00000008367 850.97 5591.79 midkine [Source:NCBI gene;Acc:423196]
25. RPS3A ENSGALG00000010077 837.68 5504.46 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
26. RPL27 ENSGALG00000002837 797.79 5242.34 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
27. MT-CYB MT-CYB 771.19 5067.55
28. RPS4 RPS4 771.19 5067.55
29. RPS11 ENSGALG00000017299 757.90 4980.22 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
30. RPS28 ENSGALG00000024398 757.90 4980.22 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
31. RPL26 RPL26 744.60 4892.82
32. RPS12 ENSGALG00000013990 744.60 4892.82 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
33. RPL21 ENSGALG00000027035 731.30 4805.43 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
34. RPL38 ENSGALG00000001465 718.01 4718.10 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
35. RPL12 ENSGALG00000008806 704.71 4630.70 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
36. NME2 ENSGALG00000002932 691.42 4543.37 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
37. RPL36AL ENSGALG00000004952 691.42 4543.37 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
38. RPL6 ENSGALG00000004818 691.42 4543.37 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
39. RPL7A ENSGALG00000003197 691.42 4543.37 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
40. RPL4 ENSGALG00000007711 678.12 4455.98 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
41. RPL13 ENSGALG00000006179 664.82 4368.58 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
42. ENO1 ENSGALG00000002377 638.23 4193.86 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
43. RPL24 ENSGALG00000015339 638.23 4193.86 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
44. RPL14 ENSGALG00000043379 624.93 4106.46 ribosomal protein L14
45. RPL27A ENSGALG00000005948 624.93 4106.46 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
46. RPL5 ENSGALG00000005922 624.93 4106.46 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
47. RPS14 ENSGALG00000004588 624.93 4106.46 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
48. RPS29 ENSGALG00000012229 624.93 4106.46 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
49. RPL18A 598.34 3931.74 ribosomal protein L18a
50. RPS21 ENSGALG00000005338 598.34 3931.74 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
51. RPL35 ENSGALG00000035677 585.04 3844.34 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
52. ENSGALG00000002696 ENSGALG00000002696 571.75 3757.01
53. RPS27A ENSGALG00000036790 571.75 3757.01 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
54. RPL36 ENSGALG00000000474 558.45 3669.62 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
55. RPS20 ENSGALG00000014432 558.45 3669.62 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
56. EEF1D 545.15 3582.22 eukaryotic translation elongation factor 1 delta, transcript variant X13
57. GNB2L1 ENSGALG00000000122 545.15 3582.22 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
58. RPL29 ENSGALG00000026978 545.15 3582.22 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
59. EEF1B2 ENSGALG00000008590 518.56 3407.50 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
60. RPL23 ENSGALG00000001634 505.26 3320.10 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
61. RPS15A ENSGALG00000006771 505.26 3320.10 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
62. gga-mir-3533 ENSGALG00000027736 505.26 3320.10 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
63. RPL15 ENSGALG00000011290 491.97 3232.77 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
64. ENSGALG00000028992 ENSGALG00000028992 478.67 3145.38
65. MT-ND4 MT-ND4 478.67 3145.38
66. PPIA ENSGALG00000028600 478.67 3145.38 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
67. RPS16 ENSGALG00000026490 478.67 3145.38 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
68. MT-ND5 MT-ND5 465.38 3058.05
69. UBB ENSGALG00000004509 452.08 2970.65 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
70. MT-ND6 MT-ND6 438.78 2883.26
71. TCEB3 ENSGALG00000034625 438.78 2883.26 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
72. MT-ND1 MT-ND1 425.49 2795.93
73. RPL10A ENSGALG00000002644 425.49 2795.93 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
74. RPLP2 ENSGALG00000034811 425.49 2795.93 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
75. RPS17 ENSGALG00000002157 425.49 2795.93 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
76. RPS7 ENSGALG00000016392 425.49 2795.93 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
77. RPS25 ENSGALG00000007699 412.19 2708.53 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
78. FTH FTH 398.89 2621.14
79. RPS13 ENSGALG00000006096 385.60 2533.81 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
80. SNRPD1 ENSGALG00000041334 372.30 2446.41 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
81. STMN1 ENSGALG00000001475 372.30 2446.41 stathmin 1 [Source:NCBI gene;Acc:396057]
82. RPL22 ENSGALG00000000719 359.00 2359.02 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
83. RPL3 ENSGALG00000012172 345.71 2271.69 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
84. RPL37 ENSGALG00000014833 332.41 2184.29 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
85. RPL7 ENSGALG00000035252 332.41 2184.29 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
86. EEF2 ENSGALG00000033884 319.11 2096.90 eukaryotic translation elongation factor 2 [Source:NCBI gene;Acc:396325]
87. TXN ENSGALG00000015704 319.11 2096.90 thioredoxin [Source:NCBI gene;Acc:396437]
88. ZNF593 ENSGALG00000000542 319.11 2096.90 zinc finger protein 593 [Source:NCBI gene;Acc:419549]
89. RPS3 ENSGALG00000017330 305.82 2009.57 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
90. GPX1 ENSGALG00000028204 292.52 1922.17 glutathione peroxidase 1 [Source:NCBI gene;Acc:100857115]
91. VIMENTIN VIMENTIN 292.52 1922.17
92. HSPA8 ENSGALG00000006512 279.23 1834.84 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
93. TPT1 ENSGALG00000028872 279.23 1834.84 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
94. RPS24 ENSGALG00000004871 265.93 1747.45 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
95. TMSB4X ENSGALG00000026383 265.93 1747.45 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
96. RPL22L1 ENSGALG00000009312 252.63 1660.05 ribosomal protein L22 like 1 [Source:NCBI gene;Acc:100858296]
97. TGFB2 ENSGALG00000009612 252.63 1660.05 transforming growth factor beta 2 [Source:NCBI gene;Acc:421352]
98. RPL37A ENSGALG00000011472 239.34 1572.72 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
99. COX7C ENSGALG00000027963 226.04 1485.33 cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
100. DYL1 ENSGALG00000007153 226.04 1485.33 dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA