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Experiment Chicken_E4_anterior_slice_1, section s29.

Sample reads: 151,775. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 2765.20 18221.13
2. RPLP1 ENSGALG00000030878 1529.45 10078.23 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
3. EEF1A EEF1A 1371.93 9040.26
4. MT-ATP6 MT-ATP6 1324.17 8725.54
5. RPS23 ENSGALG00000015617 1293.68 8524.63 ribosomal protein S23
6. RPLP0 ENSGALG00000023294 1277.42 8417.49 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
7. HBZ ENSGALG00000023740 1174.78 7741.15 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
8. gga-mir-3533 ENSGALG00000027736 1148.36 7567.05 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
9. RPS10 ENSGALG00000002813 1005.07 6622.85 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
10. GAPDH ENSGALG00000014442 999.98 6589.31 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
11. RPL35A ENSGALG00000007611, ENSGALG00000041230 985.76 6495.61 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
12. RPS12 ENSGALG00000013990 909.54 5993.36 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
13. RPS3A ENSGALG00000010077 904.46 5959.89 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
14. HBE 899.38 5926.41 hemoglobin subunit epsilon
15. RPS8 ENSGALG00000010124 896.33 5906.32 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
16. RPL4 ENSGALG00000007711 894.30 5892.94 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
17. RPS15 ENSGALG00000015195 894.30 5892.94 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
18. ENSGALG00000018384 ENSGALG00000018384 890.23 5866.12
19. RPS29 ENSGALG00000012229 860.76 5671.93 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
20. gga-mir-3527 gga-mir-3527 851.61 5611.64
21. RPL27A ENSGALG00000005948 838.40 5524.59 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
22. RPL19 ENSGALG00000001658 829.26 5464.36 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
23. RPL8 ENSGALG00000016232 829.26 5464.36 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
24. RPSA 829.26 5464.36 ribosomal protein SA
25. HBG1 HBG1 825.19 5437.54
26. RPL26 RPL26 824.17 5430.82
27. ENSGALG00000018386 ENSGALG00000018386 822.14 5417.45
28. RPL27 ENSGALG00000002837 806.90 5317.02 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
29. MT-CO1 MT-CO1 776.41 5116.11
30. RPS6 ENSGALG00000015082 766.25 5049.16 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
31. RPL23A ENSGALG00000003966 763.20 5029.06 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
32. MT-CYB MT-CYB 749.99 4942.02
33. RPL32 ENSGALG00000027142 743.89 4901.82 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
34. RPS2 ENSGALG00000005490 711.37 4687.53 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
35. RPS28 ENSGALG00000024398 710.35 4680.81 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
36. RPL13 ENSGALG00000006179 694.09 4573.67 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
37. RPL7A ENSGALG00000003197 657.51 4332.63 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
38. RPS4 RPS4 646.33 4258.96
39. RPS14 ENSGALG00000004588 633.12 4171.91 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
40. RPS21 ENSGALG00000005338 628.04 4138.43 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
41. RPL21 ENSGALG00000027035 618.89 4078.14 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
42. MDK ENSGALG00000008367 613.81 4044.67 midkine [Source:NCBI gene;Acc:423196]
43. RPL36AL ENSGALG00000004952 608.73 4011.19 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
44. ENSGALG00000002696 ENSGALG00000002696 604.67 3984.44
45. RPL29 ENSGALG00000026978 599.58 3950.90 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
46. PPIA ENSGALG00000028600 572.15 3770.15 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
47. GAL10 GAL10 564.02 3716.58
48. MT-ND5 MT-ND5 543.69 3582.61
49. RPS27A ENSGALG00000036790 538.61 3549.14 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
50. RPLP2 ENSGALG00000034811 534.54 3522.32 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
51. RPS16 ENSGALG00000026490 522.35 3442.00 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
52. RPL12 ENSGALG00000008806 513.20 3381.70 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
53. RPL18A 510.15 3361.60 ribosomal protein L18a
54. GNB2L1 ENSGALG00000000122 499.99 3294.66 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
55. RPL15 ENSGALG00000011290 499.99 3294.66 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
56. RPL5 ENSGALG00000005922 499.99 3294.66 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
57. RPS11 ENSGALG00000017299 499.99 3294.66 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
58. RPL24 ENSGALG00000015339 494.91 3261.18 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
59. RPS15A ENSGALG00000006771 484.75 3194.23 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
60. MT-ND3 MT-ND3 483.73 3187.51
61. RPL23 ENSGALG00000001634 476.62 3140.66 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
62. RPL38 ENSGALG00000001465 467.47 3080.37 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
63. NME2 ENSGALG00000002932 463.41 3053.61 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
64. RPS7 ENSGALG00000016392 458.33 3020.14 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
65. RPL35 ENSGALG00000035677 447.15 2946.47 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
66. RPL6 ENSGALG00000004818 440.03 2899.55 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
67. RPS20 ENSGALG00000014432 438.00 2886.18 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
68. RPL36 ENSGALG00000000474 434.95 2866.08 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
69. SNRPD1 ENSGALG00000041334 434.95 2866.08 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
70. ENSGALG00000028992 ENSGALG00000028992 433.94 2859.42
71. RPS25 ENSGALG00000007699 433.94 2859.42 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
72. RPL7 ENSGALG00000035252 417.68 2752.28 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
73. RPL14 ENSGALG00000043379 416.66 2745.56 ribosomal protein L14
74. MT-ND1 MT-ND1 415.64 2738.84
75. RPS17 ENSGALG00000002157 415.64 2738.84 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
76. MT-ND4 MT-ND4 408.53 2691.99
77. UBB ENSGALG00000004509 408.53 2691.99 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
78. RPS13 ENSGALG00000006096 404.47 2665.23 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
79. FTH FTH 400.40 2638.41
80. TMSB4X ENSGALG00000026383 385.16 2537.99 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
81. TCEB3 ENSGALG00000034625 379.06 2497.79 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
82. EEF1D 373.98 2464.32 eukaryotic translation elongation factor 1 delta, transcript variant X13
83. ENO1 ENSGALG00000002377 373.98 2464.32 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
84. RPL10A ENSGALG00000002644 358.73 2363.83 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
85. RPL37 ENSGALG00000014833 343.49 2263.41 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
86. ATP5G3 339.43 2236.66 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
87. RPL3 ENSGALG00000012172 315.04 2075.94 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
88. ANP32B ENSGALG00000037483 313.00 2062.50 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
89. EEF2 ENSGALG00000033884 311.99 2055.84 eukaryotic translation elongation factor 2 [Source:NCBI gene;Acc:396325]
90. TPT1 ENSGALG00000028872 309.95 2042.40 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
91. RPS3 ENSGALG00000017330 303.86 2002.27 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
92. TXN ENSGALG00000015704 300.81 1982.17 thioredoxin [Source:NCBI gene;Acc:396437]
93. MT-ND6 MT-ND6 298.78 1968.79
94. SLC25A6_1 ENSGALG00000016691 298.78 1968.79 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
95. CHCHD2 ENSGALG00000002495 295.73 1948.70 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:417544]
96. RPL31 ENSGALG00000016775 289.63 1908.50 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
97. RAN ENSGALG00000002569 281.50 1854.93 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
98. CRHOA CRHOA 278.45 1834.83
99. STMN1 ENSGALG00000001475 269.30 1774.54 stathmin 1 [Source:NCBI gene;Acc:396057]
100. GPX1 ENSGALG00000028204 267.27 1761.16 glutathione peroxidase 1 [Source:NCBI gene;Acc:100857115]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA