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Experiment Chicken_E4_anterior_slice_1, section s15.

Sample reads: 152,101. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3644.21 23960.79
2. MT-ATP6 MT-ATP6 1958.21 12875.29
3. EEF1A EEF1A 1755.93 11545.29
4. RPLP1 ENSGALG00000030878 1634.35 10745.90 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
5. RPLP0 ENSGALG00000023294 1555.81 10229.50 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
6. RPL35A ENSGALG00000007611, ENSGALG00000041230 1400.87 9210.76 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
7. RPS23 ENSGALG00000015617 1271.76 8361.86 ribosomal protein S23
8. gga-mir-3527 gga-mir-3527 1267.46 8333.59
9. RPS10 ENSGALG00000002813 1249.17 8213.33 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
10. GAPDH ENSGALG00000014442 1051.19 6911.60 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
11. RPS6 ENSGALG00000015082 999.55 6572.07 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
12. MT-CYB MT-CYB 996.32 6550.83
13. RPS29 ENSGALG00000012229 984.49 6473.05 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
14. MT-CO1 MT-CO1 968.35 6366.93
15. RPS8 ENSGALG00000010124 966.19 6352.73 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
16. RPSA 946.83 6225.43 ribosomal protein SA
17. RPL27 ENSGALG00000002837 914.55 6013.19 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
18. RPS12 ENSGALG00000013990 912.40 5999.06 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
19. RPS28 ENSGALG00000024398 899.49 5914.17 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
20. gga-mir-3533 ENSGALG00000027736 896.26 5892.94 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
21. RPL4 ENSGALG00000007711 868.28 5708.97 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
22. RPL19 ENSGALG00000001658 859.68 5652.42 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
23. RPL32 ENSGALG00000027142 859.68 5652.42 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
24. RPS11 ENSGALG00000017299 855.37 5624.08 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
25. RPL8 ENSGALG00000016232 851.07 5595.81 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
26. RPL27A ENSGALG00000005948 834.93 5489.69 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
27. RPS3A ENSGALG00000010077 831.70 5468.45 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
28. RPS15 ENSGALG00000015195 828.47 5447.21 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
29. MT-ND5 MT-ND5 814.49 5355.30
30. ENSGALG00000018384 ENSGALG00000018384 813.41 5348.19
31. RPL7A ENSGALG00000003197 762.84 5015.69 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
32. RPS4 RPS4 757.46 4980.32
33. RPL26 RPL26 752.08 4944.95
34. RPL23A ENSGALG00000003966 741.32 4874.20 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
35. RPS21 ENSGALG00000005338 701.51 4612.45 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
36. RPS2 ENSGALG00000005490 698.29 4591.28 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
37. RPL18A 696.13 4577.07 ribosomal protein L18a
38. PPIA ENSGALG00000028600 688.60 4527.56 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
39. RPS14 ENSGALG00000004588 653.10 4294.15 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
40. RPS27A ENSGALG00000036790 631.58 4152.66 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
41. RPL38 ENSGALG00000001465 626.20 4117.28 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
42. RPL23 ENSGALG00000001634 616.51 4053.57 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
43. RPL29 ENSGALG00000026978 598.22 3933.31 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
44. NME2 ENSGALG00000002932 592.84 3897.94 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
45. RPS16 ENSGALG00000026490 589.62 3876.77 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
46. RPL5 ENSGALG00000005922 569.17 3742.31 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
47. MT-ND3 MT-ND3 563.79 3706.94
48. GNB2L1 ENSGALG00000000122 560.56 3685.70 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
49. RPS20 ENSGALG00000014432 555.19 3650.39 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
50. RPL12 ENSGALG00000008806 551.96 3629.15 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
51. MT-ND1 MT-ND1 550.88 3622.05
52. ENSGALG00000002696 ENSGALG00000002696 549.81 3615.02
53. RPL36AL ENSGALG00000004952 543.35 3572.54 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
54. RPL13 ENSGALG00000006179 540.12 3551.30 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
55. RPL24 ENSGALG00000015339 540.12 3551.30 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
56. RPL14 ENSGALG00000043379 537.97 3537.17 ribosomal protein L14
57. RPL35 ENSGALG00000035677 536.89 3530.07 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
58. RPLP2 ENSGALG00000034811 521.83 3431.05 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
59. RPL15 ENSGALG00000011290 514.30 3381.54 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
60. RPS13 ENSGALG00000006096 513.22 3374.44 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
61. RPS15A ENSGALG00000006771 513.22 3374.44 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
62. RPS7 ENSGALG00000016392 497.08 3268.32 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
63. TMSB4X ENSGALG00000026383 479.87 3155.16 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
64. RPS25 ENSGALG00000007699 478.79 3148.06 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
65. TCEB3 ENSGALG00000034625 476.64 3133.92 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
66. RPL6 ENSGALG00000004818 462.65 3041.94 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
67. RPL21 ENSGALG00000027035 459.43 3020.77 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
68. MT-ND4 MT-ND4 449.74 2957.05
69. RPS17 ENSGALG00000002157 444.36 2921.68 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
70. ENSGALG00000028992 ENSGALG00000028992 436.83 2872.17
71. EEF1D 434.68 2858.03 eukaryotic translation elongation factor 1 delta, transcript variant X13
72. ENSGALG00000018386 ENSGALG00000018386 434.68 2858.03
73. RPL7 ENSGALG00000035252 426.07 2801.42 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
74. ENO1 ENSGALG00000002377 422.84 2780.19 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
75. MT-ND6 MT-ND6 421.77 2773.15
76. MDK ENSGALG00000008367 412.09 2709.50 midkine [Source:NCBI gene;Acc:423196]
77. RPL36 ENSGALG00000000474 408.86 2688.27 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
78. FTH FTH 369.05 2426.51
79. UBB ENSGALG00000004509 365.82 2405.28 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
80. SNRPD1 ENSGALG00000041334 362.59 2384.04 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
81. RPL10A ENSGALG00000002644 356.14 2341.63 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
82. RPL3 ENSGALG00000012172 349.68 2299.16 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
83. RPS3 ENSGALG00000017330 341.07 2242.55 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
84. RPL37 ENSGALG00000014833 340.00 2235.51 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
85. TXN ENSGALG00000015704 334.62 2200.14 thioredoxin [Source:NCBI gene;Acc:396437]
86. ATP5G3 310.95 2044.51 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
87. RPL22 ENSGALG00000000719 309.87 2037.40 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
88. EEF1B2 ENSGALG00000008590 303.42 1995.00 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
89. ANP32B ENSGALG00000037483 293.73 1931.28 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
90. STMN1 ENSGALG00000001475 292.66 1924.25 stathmin 1 [Source:NCBI gene;Acc:396057]
91. HSPA8 ENSGALG00000006512 271.14 1782.75 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
92. RPS24 ENSGALG00000004871 271.14 1782.75 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
93. DYL1 ENSGALG00000007153 268.99 1768.62 dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
94. MARCKSL1 ENSGALG00000032335 267.91 1761.52 MARCKS like 1 [Source:NCBI gene;Acc:770764]
95. PRDX1 ENSGALG00000010243 261.45 1719.04 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
96. H3-IX H3-IX 258.23 1697.87
97. TPT1 ENSGALG00000028872 258.23 1697.87 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
98. CRHOA CRHOA 257.15 1690.77
99. SLC25A6_1 ENSGALG00000016691 257.15 1690.77 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
100. RPL31 ENSGALG00000016775 244.24 1605.89 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA