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Experiment Chicken_E4_anterior_slice_1, section s13.

Sample reads: 152,238. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3438.29 22587.05
2. EEF1A EEF1A 1909.39 12543.30
3. RPLP1 ENSGALG00000030878 1615.06 10609.76 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
4. RPS23 ENSGALG00000015617 1532.67 10068.52 ribosomal protein S23
5. RPLP0 ENSGALG00000023294 1397.45 9180.23 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
6. RPS10 ENSGALG00000002813 1233.31 8101.95 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
7. MT-ATP6 MT-ATP6 1231.42 8089.53
8. RPL35A ENSGALG00000007611, ENSGALG00000041230 1219.47 8011.03 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
9. GAPDH ENSGALG00000014442 1110.67 7296.29 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
10. gga-mir-3527 gga-mir-3527 1052.18 6912.05
11. RPS8 ENSGALG00000010124 980.48 6441.04 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
12. RPS3A ENSGALG00000010077 973.56 6395.58 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
13. RPL27 ENSGALG00000002837 962.24 6321.21 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
14. RPL27A ENSGALG00000005948 958.47 6296.45 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
15. RPL4 ENSGALG00000007711 937.09 6156.00 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
16. gga-mir-3533 ENSGALG00000027736 928.28 6098.12 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
17. RPL32 ENSGALG00000027142 892.43 5862.61 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
18. RPS15 ENSGALG00000015195 888.03 5833.71 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
19. RPS29 ENSGALG00000012229 888.03 5833.71 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
20. RPS6 ENSGALG00000015082 884.26 5808.94 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
21. RPSA 862.25 5664.35 ribosomal protein SA
22. RPL23A ENSGALG00000003966 858.47 5639.52 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
23. RPS12 ENSGALG00000013990 854.70 5614.75 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
24. RPL8 ENSGALG00000016232 852.81 5602.34 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
25. RPL19 ENSGALG00000001658 808.16 5309.02 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
26. MT-CYB MT-CYB 779.23 5118.97
27. MT-CO1 MT-CO1 777.34 5106.56
28. RPS28 ENSGALG00000024398 772.31 5073.51 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
29. RPS2 ENSGALG00000005490 767.91 5044.61 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
30. HBZ ENSGALG00000023740 730.80 4800.82 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
31. RPL26 RPL26 728.29 4784.33
32. RPS11 ENSGALG00000017299 723.88 4755.36 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
33. RPS4 RPS4 716.34 4705.83
34. RPS21 ENSGALG00000005338 715.71 4701.69 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
35. RPS14 ENSGALG00000004588 705.02 4631.47 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
36. RPL7A ENSGALG00000003197 693.07 4552.96 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
37. RPL18A 689.92 4532.27 ribosomal protein L18a
38. RPS27A ENSGALG00000036790 672.31 4416.59 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
39. RPL13 ENSGALG00000006179 667.28 4383.54 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
40. RPL12 ENSGALG00000008806 659.73 4333.94 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
41. RPL36AL ENSGALG00000004952 655.33 4305.04 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
42. RPL29 ENSGALG00000026978 653.44 4292.62 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
43. MT-ND3 MT-ND3 647.78 4255.44
44. PPIA ENSGALG00000028600 624.51 4102.57 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
45. ENSGALG00000018384 ENSGALG00000018384 622.63 4090.22
46. RPL24 ENSGALG00000015339 610.05 4007.58 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
47. RPL35 ENSGALG00000035677 603.76 3966.26 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
48. RPL5 ENSGALG00000005922 600.62 3945.63 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
49. RPL21 ENSGALG00000027035 588.04 3862.99 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
50. TMSB4X ENSGALG00000026383 588.04 3862.99 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
51. RPL38 ENSGALG00000001465 584.26 3838.16 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
52. RPS16 ENSGALG00000026490 573.57 3767.94 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
53. RPL23 ENSGALG00000001634 559.74 3677.08 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
54. RPS15A ENSGALG00000006771 549.04 3606.79 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
55. RPS25 ENSGALG00000007699 548.42 3602.72 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
56. ENSGALG00000002696 ENSGALG00000002696 536.47 3524.22
57. RPL14 ENSGALG00000043379 533.32 3503.52 ribosomal protein L14
58. RPS13 ENSGALG00000006096 530.18 3482.90 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
59. MT-ND5 MT-ND5 518.23 3404.39
60. HBE 516.97 3396.12 hemoglobin subunit epsilon
61. NME2 ENSGALG00000002932 513.20 3371.35 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
62. RPS20 ENSGALG00000014432 512.57 3367.21 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
63. RPL7 ENSGALG00000035252 511.31 3358.93 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
64. RPS7 ENSGALG00000016392 508.17 3338.31 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
65. GNB2L1 ENSGALG00000000122 505.02 3317.61 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
66. RPL15 ENSGALG00000011290 502.50 3301.06 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
67. HBG1 HBG1 497.47 3268.01
68. RPLP2 ENSGALG00000034811 493.70 3243.25 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
69. RPS17 ENSGALG00000002157 492.44 3234.97 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
70. RPL36 ENSGALG00000000474 488.67 3210.20 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
71. RPL6 ENSGALG00000004818 472.95 3106.94 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
72. ENSGALG00000028992 ENSGALG00000028992 466.03 3061.48
73. MT-ND4 MT-ND4 430.81 2830.11
74. MT-ND1 MT-ND1 425.78 2797.06
75. TCEB3 ENSGALG00000034625 425.78 2797.06 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
76. STMN1 ENSGALG00000001475 420.75 2764.02 stathmin 1 [Source:NCBI gene;Acc:396057]
77. EEF1D 417.60 2743.33 eukaryotic translation elongation factor 1 delta, transcript variant X13
78. RPL10A ENSGALG00000002644 417.60 2743.33 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
79. ENO1 ENSGALG00000002377 410.68 2697.87 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
80. UBB ENSGALG00000004509 406.28 2668.96 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
81. SNRPD1 ENSGALG00000041334 403.76 2652.41 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
82. RPL37 ENSGALG00000014833 383.01 2516.10 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
83. RPL31 ENSGALG00000016775 358.48 2354.95 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
84. ATP5G3 351.56 2309.49 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
85. TXN ENSGALG00000015704 345.90 2272.31 thioredoxin [Source:NCBI gene;Acc:396437]
86. FTH FTH 331.44 2177.32
87. RPL3 ENSGALG00000012172 323.89 2127.72 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
88. PRDX1 ENSGALG00000010243 321.38 2111.23 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
89. RPS3 ENSGALG00000017330 321.38 2111.23 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
90. LDHB ENSGALG00000035836 312.57 2053.36 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
91. DYL1 ENSGALG00000007153 305.02 2003.76 dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
92. ENSGALG00000018386 ENSGALG00000018386 298.74 1962.50
93. MDK ENSGALG00000008367 297.48 1954.23 midkine [Source:NCBI gene;Acc:423196]
94. CRHOA CRHOA 295.59 1941.81
95. TPT1 ENSGALG00000028872 291.82 1917.04 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
96. RAN ENSGALG00000002569 286.79 1884.00 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
97. RPS24 ENSGALG00000004871 284.27 1867.45 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
98. RPL22 ENSGALG00000000719 278.61 1830.26 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
99. ANP32B ENSGALG00000037483 274.21 1801.36 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
100. MIF ENSGALG00000006326 272.95 1793.08 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA