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Experiment Chicken_E3_posterior_slice_3, section s59.

Sample reads: 124,240. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 6006.12 48342.82
2. MT-ATP6 MT-ATP6 5662.91 45580.35
3. MT-ND4 MT-ND4 4118.48 33149.35
4. MT-ND3 MT-ND3 3088.86 24862.01
5. MT-CYB MT-CYB 2917.26 23480.81
6. MT-CO1 MT-CO1 2745.66 22099.62
7. gga-mir-3527 gga-mir-3527 2574.05 20718.34
8. GAPDH ENSGALG00000014442 2230.85 17955.95 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
9. MT-ND1 MT-ND1 2059.24 16574.67
10. EEF1A EEF1A 1544.43 12431.00
11. MT-ND5 MT-ND5 1544.43 12431.00
12. RPL8 ENSGALG00000016232 1372.83 11049.81 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
13. RPS16 ENSGALG00000026490 1372.83 11049.81 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
14. RPS3 ENSGALG00000017330 1201.22 9668.53 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
15. gga-mir-3533 ENSGALG00000027736 1201.22 9668.53 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
16. RPL15 ENSGALG00000011290 1029.62 8287.34 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
17. H3-IX H3-IX 858.02 6906.14
18. MT-ND2 MT-ND2 858.02 6906.14
19. NME2 ENSGALG00000002932 858.02 6906.14 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
20. RPL23 ENSGALG00000001634 858.02 6906.14 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
21. RPS6 ENSGALG00000015082 858.02 6906.14 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
22. SNRPE ENSGALG00000000137 858.02 6906.14 small nuclear ribonucleoprotein polypeptide E [Source:NCBI gene;Acc:396180]
23. ATP6V0C ENSGALG00000009229 686.41 5524.86 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
24. CNN3 ENSGALG00000005597 686.41 5524.86 Gallus gallus calponin 3 (CNN3), mRNA. [Source:RefSeq mRNA;Acc:NM_001354671]
25. EEF1B2 ENSGALG00000008590 686.41 5524.86 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
26. HSPA8 ENSGALG00000006512 686.41 5524.86 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
27. PREP ENSGALG00000015405 686.41 5524.86 prolyl endopeptidase [Source:NCBI gene;Acc:421785]
28. PSMA7 ENSGALG00000030411 686.41 5524.86 proteasome subunit alpha 7 [Source:NCBI gene;Acc:395318]
29. RPS10 ENSGALG00000002813 686.41 5524.86 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
30. RPS20 ENSGALG00000014432 686.41 5524.86 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
31. RPS29 ENSGALG00000012229 686.41 5524.86 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
32. COX6C ENSGALG00000035996 514.81 4143.67 cytochrome c oxidase subunit 6C [Source:NCBI gene;Acc:420243]
33. CRHOA CRHOA 514.81 4143.67
34. ENSGALG00000018384 ENSGALG00000018384 514.81 4143.67
35. FKBP4 ENSGALG00000014331 514.81 4143.67 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
36. HBE 514.81 4143.67 hemoglobin subunit epsilon
37. HSPE1 ENSGALG00000009070 514.81 4143.67 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
38. MDH1 ENSGALG00000008858 514.81 4143.67 malate dehydrogenase 1 [Source:NCBI gene;Acc:421281]
39. MIF ENSGALG00000006326 514.81 4143.67 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
40. NEO1 ENSGALG00000001774 514.81 4143.67 neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
41. PPIA ENSGALG00000028600 514.81 4143.67 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
42. RPA2 514.81 4143.67 replication protein A2
43. RPL18A 514.81 4143.67 ribosomal protein L18a
44. RPL5 ENSGALG00000005922 514.81 4143.67 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
45. RPL7A ENSGALG00000003197 514.81 4143.67 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
46. RPLP1 ENSGALG00000030878 514.81 4143.67 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
47. RPS27A ENSGALG00000036790 514.81 4143.67 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
48. SLC25A6_1 ENSGALG00000016691 514.81 4143.67 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
49. SMARCE1 ENSGALG00000003882 514.81 4143.67 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:NCBI gene;Acc:420047]
50. TMSB4X ENSGALG00000026383 514.81 4143.67 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
51. ACTG1 ENSGALG00000001381 343.21 2762.47 Actin, gamma 1 [Source:NCBI gene;Acc:415296]
52. ACTG1_1 ENSGALG00000001381 343.21 2762.47 Actin, gamma 1 [Source:NCBI gene;Acc:415296]
53. AKAP1 ENSGALG00000005575 343.21 2762.47 A-kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:367]
54. ANP32B ENSGALG00000037483 343.21 2762.47 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
55. ATP5G3 343.21 2762.47 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
56. ATP6V1G1 ENSGALG00000007190 343.21 2762.47 ATPase H+ transporting V1 subunit G1 [Source:NCBI gene;Acc:417249]
57. CCT6 CCT6 343.21 2762.47
58. CHCHD2 ENSGALG00000002495 343.21 2762.47 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:417544]
59. CSE1L ENSGALG00000004707 343.21 2762.47 chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
60. DIMT1 ENSGALG00000020569 343.21 2762.47 DIM1 dimethyladenosine transferase 1 homolog [Source:HGNC Symbol;Acc:HGNC:30217]
61. EIF3I ENSGALG00000003337 343.21 2762.47 eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
62. ENSGALG00000018386 ENSGALG00000018386 343.21 2762.47
63. ENSGALG00000028992 ENSGALG00000028992 343.21 2762.47
64. FSBP 343.21 2762.47 fibrinogen silencer binding protein
65. H2AFZ ENSGALG00000014023 343.21 2762.47 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
66. HMGB2 ENSGALG00000010745 343.21 2762.47 high mobility group box 2 [Source:NCBI gene;Acc:396482]
67. IMP4 ENSGALG00000029152 343.21 2762.47 IMP4, U3 small nucleolar ribonucleoprotein [Source:NCBI gene;Acc:100857200]
68. ITGB1BP3 ENSGALG00000030120 343.21 2762.47 integrin beta 1 binding protein 3 [Source:NCBI gene;Acc:415448]
69. KLHL18 ENSGALG00000005582 343.21 2762.47 kelch like family member 18 [Source:NCBI gene;Acc:420406]
70. LMF1 ENSGALG00000044187 343.21 2762.47 lipase maturation factor 1 [Source:HGNC Symbol;Acc:HGNC:14154]
71. MATR3 ENSGALG00000002478 343.21 2762.47 matrin 3 [Source:NCBI gene;Acc:373948]
72. MRPL32 ENSGALG00000037258 343.21 2762.47 mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
73. MRPL37 ENSGALG00000010761 343.21 2762.47 mitochondrial ribosomal protein L37 [Source:NCBI gene;Acc:772313]
74. MRPL42 ENSGALG00000011293 343.21 2762.47 mitochondrial ribosomal protein L42 [Source:HGNC Symbol;Acc:HGNC:14493]
75. NDUFB4 ENSGALG00000027688 343.21 2762.47 NADH:ubiquinone oxidoreductase subunit B4 [Source:HGNC Symbol;Acc:HGNC:7699]
76. NTAN1 ENSGALG00000040905 343.21 2762.47 N-terminal asparagine amidase [Source:HGNC Symbol;Acc:HGNC:29909]
77. PHB2 ENSGALG00000014567 343.21 2762.47 prohibitin 2 [Source:NCBI gene;Acc:771124]
78. PIK3IP1 ENSGALG00000006942 343.21 2762.47 phosphoinositide-3-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24942]
79. PSMB1 ENSGALG00000011174 343.21 2762.47 proteasome subunit beta 1 [Source:NCBI gene;Acc:421551]
80. PTBP1 ENSGALG00000001962 343.21 2762.47 polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:420098]
81. RAB20 ENSGALG00000016844 343.21 2762.47 RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]
82. RPL12 ENSGALG00000008806 343.21 2762.47 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
83. RPL27A ENSGALG00000005948 343.21 2762.47 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
84. RPL29 ENSGALG00000026978 343.21 2762.47 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
85. RPL31 ENSGALG00000016775 343.21 2762.47 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
86. RPL35A ENSGALG00000007611, ENSGALG00000041230 343.21 2762.47 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
87. RPL36 ENSGALG00000000474 343.21 2762.47 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
88. RPL37A ENSGALG00000011472 343.21 2762.47 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
89. RPL4 ENSGALG00000007711 343.21 2762.47 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
90. RPL9 ENSGALG00000000150 343.21 2762.47 ribosomal protein L9 [Source:NCBI gene;Acc:425468]
91. RPS14 ENSGALG00000004588 343.21 2762.47 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
92. RPS23 ENSGALG00000015617 343.21 2762.47 ribosomal protein S23
93. RPS4 RPS4 343.21 2762.47
94. RPS7 ENSGALG00000016392 343.21 2762.47 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
95. RPSA 343.21 2762.47 ribosomal protein SA
96. SNRPG ENSGALG00000028409 343.21 2762.47 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
97. ST13 ENSGALG00000012007 343.21 2762.47 ST13, Hsp70 interacting protein [Source:NCBI gene;Acc:418003]
98. STX2 ENSGALG00000002536 343.21 2762.47 syntaxin 2 [Source:NCBI gene;Acc:378895]
99. TCEB3 ENSGALG00000034625 343.21 2762.47 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
100. TCF12 ENSGALG00000004304 343.21 2762.47 transcription factor 12 [Source:NCBI gene;Acc:396334]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA