Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_posterior_slice_3, section s50.

Sample reads: 124,240. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 8526.34 68627.72
2. MT-CO3 MT-CO3 5481.22 44117.83
3. MT-ND4 MT-ND4 3045.12 24509.89
4. gga-mir-3533 ENSGALG00000027736 3045.12 24509.89 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
5. EIF4G2 ENSGALG00000005587 2436.10 19607.94 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
6. MT-CYB MT-CYB 2436.10 19607.94
7. MT-ND1 MT-ND1 2436.10 19607.94
8. gga-mir-3527 gga-mir-3527 2436.10 19607.94
9. HMGN2 HMGN2 1827.07 14705.92
10. MT-ND5 MT-ND5 1827.07 14705.92
11. RPL15 ENSGALG00000011290 1827.07 14705.92 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
12. RPL21 ENSGALG00000027035 1827.07 14705.92 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
13. CHMP5 ENSGALG00000013160 1218.05 9803.97 charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
14. DDX5 ENSGALG00000003532 1218.05 9803.97 DEAD-box helicase 5 [Source:NCBI gene;Acc:395629]
15. EEF1A EEF1A 1218.05 9803.97
16. GCLM ENSGALG00000005782 1218.05 9803.97 glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
17. MT-ND3 MT-ND3 1218.05 9803.97
18. MT-ND6 MT-ND6 1218.05 9803.97
19. NDUFA2 ENSGALG00000040626 1218.05 9803.97 NADH:ubiquinone oxidoreductase subunit A2 [Source:NCBI gene;Acc:768860]
20. RPL26 RPL26 1218.05 9803.97
21. RPL37A ENSGALG00000011472 1218.05 9803.97 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
22. RPL5 ENSGALG00000005922 1218.05 9803.97 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
23. RPL8 ENSGALG00000016232 1218.05 9803.97 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
24. SLC25A6_1 ENSGALG00000016691 1218.05 9803.97 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
25. TXN ENSGALG00000015704 1218.05 9803.97 thioredoxin [Source:NCBI gene;Acc:396437]
26. ALYREF ENSGALG00000007237 609.02 4901.95 Aly/REF export factor [Source:NCBI gene;Acc:769169]
27. AN1ZNF5L ENSGALG00000014589 609.02 4901.95 AN1-type zinc finger protein 5-like, transcript variant X2
28. ANP32B ENSGALG00000037483 609.02 4901.95 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
29. AP1M1 ENSGALG00000003959 609.02 4901.95 adaptor related protein complex 1 subunit mu 1 [Source:NCBI gene;Acc:420149]
30. ARGLU1 ENSGALG00000016855 609.02 4901.95 arginine and glutamate rich 1 [Source:NCBI gene;Acc:418765]
31. ARHGAP11A ENSGALG00000009731 609.02 4901.95 Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
32. ATL1 ENSGALG00000012339 609.02 4901.95 atlastin GTPase 1 [Source:HGNC Symbol;Acc:HGNC:11231]
33. ATRX ENSGALG00000007843 609.02 4901.95 ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
34. BSDC1 ENSGALG00000003405 609.02 4901.95 BSD domain containing 1 [Source:NCBI gene;Acc:419658]
35. CARKD CARKD 609.02 4901.95
36. CASP3 ENSGALG00000010638 609.02 4901.95 caspase 3 [Source:NCBI gene;Acc:395476]
37. CCDC59 ENSGALG00000028648 609.02 4901.95 coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
38. CDC34 ENSGALG00000024332 609.02 4901.95 cell division cycle 34 [Source:HGNC Symbol;Acc:HGNC:1734]
39. CDK1 ENSGALG00000003085 609.02 4901.95 cyclin dependent kinase 1 [Source:NCBI gene;Acc:396252]
40. CENPP ENSGALG00000004687 609.02 4901.95 centromere protein P [Source:NCBI gene;Acc:415952]
41. CHTOP ENSGALG00000042129 609.02 4901.95 chromatin target of PRMT1 [Source:HGNC Symbol;Acc:HGNC:24511]
42. CLNS1A ENSGALG00000008574 609.02 4901.95 chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
43. COL4A6 ENSGALG00000008266 609.02 4901.95 collagen type IV alpha 6 chain [Source:HGNC Symbol;Acc:HGNC:2208]
44. COX4I1 609.02 4901.95 cytochrome c oxidase subunit 4I1, transcript variant X1
45. CRHOA CRHOA 609.02 4901.95
46. CTDP1 ENSGALG00000031461 609.02 4901.95 CTD phosphatase subunit 1 [Source:HGNC Symbol;Acc:HGNC:2498]
47. CWC15 ENSGALG00000017207 609.02 4901.95 CWC15 spliceosome associated protein homolog [Source:NCBI gene;Acc:418996]
48. DDX24 ENSGALG00000010884 609.02 4901.95 DEAD-box helicase 24 [Source:HGNC Symbol;Acc:HGNC:13266]
49. DYL1 ENSGALG00000007153 609.02 4901.95 dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
50. EBNA1BP2 ENSGALG00000009045 609.02 4901.95 EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
51. EIF3D ENSGALG00000012529 609.02 4901.95 eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
52. EIF3E ENSGALG00000037067 609.02 4901.95 eukaryotic translation initiation factor 3 subunit E [Source:NCBI gene;Acc:420272]
53. EIF4A2 ENSGALG00000008684 609.02 4901.95 eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
54. EIF4EBP1 ENSGALG00000003205 609.02 4901.95 eukaryotic translation initiation factor 4E binding protein 1 [Source:HGNC Symbol;Acc:HGNC:3288]
55. ENO1 ENSGALG00000002377 609.02 4901.95 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
56. ENSGALG00000010034 ENSGALG00000010034 609.02 4901.95
57. ENSGALG00000018384 ENSGALG00000018384 609.02 4901.95
58. ENSGALG00000018386 ENSGALG00000018386 609.02 4901.95
59. FAM125B FAM125B 609.02 4901.95
60. FXN ENSGALG00000015108 609.02 4901.95 frataxin [Source:HGNC Symbol;Acc:HGNC:3951]
61. GAPDH ENSGALG00000014442 609.02 4901.95 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
62. GGA3 ENSGALG00000007992 609.02 4901.95 golgi associated, gamma adaptin ear containing, ARF binding protein 3 [Source:NCBI gene;Acc:422121]
63. H2AFZ ENSGALG00000014023 609.02 4901.95 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
64. H3-IX H3-IX 609.02 4901.95
65. HAUS2 ENSGALG00000009111 609.02 4901.95 HAUS augmin like complex subunit 2 [Source:NCBI gene;Acc:423237]
66. HBXIP HBXIP 609.02 4901.95
67. HMGN5 ENSGALG00000007131 609.02 4901.95 high mobility group nucleosome binding domain 5, transcript variant X1
68. HNRNPA0 ENSGALG00000006160 609.02 4901.95 heterogeneous nuclear ribonucleoprotein A0 [Source:HGNC Symbol;Acc:HGNC:5030]
69. HNRNPA3 ENSGALG00000009250 609.02 4901.95 heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:HGNC:24941]
70. IPO7 ENSGALG00000005807 609.02 4901.95 importin 7 [Source:HGNC Symbol;Acc:HGNC:9852]
71. JKAMP ENSGALG00000012009 609.02 4901.95 JNK1/MAPK8-associated membrane protein [Source:NCBI gene;Acc:423530]
72. KIAA0895L 609.02 4901.95 KIAA0895 like, transcript variant X4
73. LDHB ENSGALG00000035836 609.02 4901.95 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
74. MADD ENSGALG00000008181 609.02 4901.95 MAP kinase activating death domain [Source:HGNC Symbol;Acc:HGNC:6766]
75. MAPRE1 ENSGALG00000006657 609.02 4901.95 microtubule associated protein RP/EB family member 1 [Source:NCBI gene;Acc:419288]
76. MDK ENSGALG00000008367 609.02 4901.95 midkine [Source:NCBI gene;Acc:423196]
77. MEIS2 ENSGALG00000039118 609.02 4901.95 Meis homeobox 2 [Source:NCBI gene;Acc:395588]
78. MIF ENSGALG00000006326 609.02 4901.95 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
79. MMADHC ENSGALG00000012473 609.02 4901.95 methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
80. MRPL17 ENSGALG00000002605 609.02 4901.95 mitochondrial ribosomal protein L17 [Source:HGNC Symbol;Acc:HGNC:14053]
81. MRPS17 ENSGALG00000002379 609.02 4901.95 mitochondrial ribosomal protein S17 [Source:NCBI gene;Acc:417538]
82. MT-CO1 MT-CO1 609.02 4901.95
83. NDUFA11 ENSGALG00000021692 609.02 4901.95 NADH:ubiquinone oxidoreductase subunit A11
84. NDUFA4 ENSGALG00000025999 609.02 4901.95 NDUFA4, mitochondrial complex associated [Source:NCBI gene;Acc:772135]
85. NECAP1 ENSGALG00000037656 609.02 4901.95 NECAP endocytosis associated 1 [Source:HGNC Symbol;Acc:HGNC:24539]
86. NME2 ENSGALG00000002932 609.02 4901.95 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
87. NOC4L ENSGALG00000002272 609.02 4901.95 nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
88. NPFF1 NPFF1 609.02 4901.95
89. NUP188 ENSGALG00000043394 609.02 4901.95 nucleoporin 188 [Source:NCBI gene;Acc:417198]
90. PDCD2L 609.02 4901.95 programmed cell death 2-like
91. PDIA6 ENSGALG00000016447 609.02 4901.95 protein disulfide isomerase family A member 6 [Source:HGNC Symbol;Acc:HGNC:30168]
92. PGM1 ENSGALG00000011016 609.02 4901.95 phosphoglucomutase 1 [Source:NCBI gene;Acc:424691]
93. PIK3IP1 ENSGALG00000006942 609.02 4901.95 phosphoinositide-3-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24942]
94. PITX2 ENSGALG00000042492 609.02 4901.95 paired like homeodomain 2 [Source:NCBI gene;Acc:395862]
95. PPIA ENSGALG00000028600 609.02 4901.95 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
96. PRDX3 ENSGALG00000009369 609.02 4901.95 peroxiredoxin 3 [Source:HGNC Symbol;Acc:HGNC:9354]
97. PRKG1 ENSGALG00000003805 609.02 4901.95 protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
98. PRPS1 ENSGALG00000004908 609.02 4901.95 phosphoribosyl pyrophosphate synthetase 1
99. PSMA7 ENSGALG00000030411 609.02 4901.95 proteasome subunit alpha 7 [Source:NCBI gene;Acc:395318]
100. PTBP1 ENSGALG00000001962 609.02 4901.95 polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:420098]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA