Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CTDP1

Gene Name Gene ID Reads Annotation
CTDP1 ENSGALG00000031461 4818 CTD phosphatase subunit 1 [Source:HGNC Symbol;Acc:HGNC:2498]











Genes with expression patterns similar to CTDP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CTDP1 ENSGALG00000031461 4818 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CTD phosphatase subunit 1 [Source:HGNC Symbol;Acc:HGNC:2498]
2. SCO1 ENSGALG00000030475 7304 1.588 - - - - - - 0.829 - 0.759 - SCO1, cytochrome c oxidase assembly protein [Source:HGNC Symbol;Acc:HGNC:10603]
3. RBBP8 ENSGALG00000014982 3255 1.587 - - - - - - 0.767 - 0.820 - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
4. CDCA7 ENSGALG00000040833 7484 1.542 - - - - - - 0.795 0.747 - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
5. RCOR3 ENSGALG00000009871 7022 1.507 - - - - - - 0.757 0.750 - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
6. TMEM126A ENSGALG00000014066 6149 1.504 - - - - - - 0.752 0.752 - - transmembrane protein 126A [Source:HGNC Symbol;Acc:HGNC:25382]
7. TRIP13 ENSGALG00000033834 6590 1.492 - - - - - - 0.773 - 0.719 - thyroid hormone receptor interactor 13 [Source:NCBI gene;Acc:420798]
8. PDHB ENSGALG00000029576 12254 1.49 - - - - - - 0.753 0.737 - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
9. NAA20 ENSGALG00000012587 11349 1.478 - - - - - - 0.750 - 0.728 - N(alpha)-acetyltransferase 20, NatB catalytic subunit [Source:HGNC Symbol;Acc:HGNC:15908]
10. RNFT1 ENSGALG00000005205 2888 1.467 - - - - - - 0.708 0.759 - - ring finger protein, transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:30206]
11. RRP1B ENSGALG00000035696 12309 1.458 - - - - - - 0.755 - 0.703 - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
12. ZNF704 ENSGALG00000030011 1984 1.419 - - - - - - 0.713 - 0.706 - zinc finger protein 704 [Source:HGNC Symbol;Acc:HGNC:32291]
13. SELT SELT 25524 0.926 - - - - - - - 0.926 - -
14. EIF3E ENSGALG00000037067 36561 0.904 - - - - - - - 0.904 - - eukaryotic translation initiation factor 3 subunit E [Source:NCBI gene;Acc:420272]
15. NUP188 ENSGALG00000043394 9288 0.883 - - - - - - - 0.883 - - nucleoporin 188 [Source:NCBI gene;Acc:417198]
16. GOLGA7 ENSGALG00000003483 26525 0.881 - - - - - - 0.881 - - - golgin A7 [Source:NCBI gene;Acc:426787]
17. YWHAZ ENSGALG00000031387 84985 0.869 - - - - - - 0.869 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
18. ECI1 ENSGALG00000031563 11326 0.864 - - - - - - 0.864 - - - enoyl-CoA delta isomerase 1 [Source:NCBI gene;Acc:416657]
19. VWF ENSGALG00000017272 1012 0.863 - - - - - - - - 0.863 - Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
20. UBE2V1 ENSGALG00000008015 17947 0.863 - - - - - - 0.863 - - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
21. CCNDBP1 ENSGALG00000004837 11520 0.855 - - - - - - 0.855 - - - cyclin D1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1587]
22. SRSF3 ENSGALG00000000533 51281 0.851 - - - - - - - 0.851 - - serine and arginine rich splicing factor 3 [Source:NCBI gene;Acc:419815]
23. CHD2 ENSGALG00000006949 1076 0.849 - - - - - - - - 0.849 - chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:415507]
24. CBLL1 ENSGALG00000038981 6725 0.846 - - - - - - 0.846 - - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
25. GLRX3 ENSGALG00000010464 22578 0.846 - - - - - - 0.846 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
26. AP5Z1 ENSGALG00000040528 4302 0.845 - - - - - - 0.845 - - - adaptor related protein complex 5 subunit zeta 1 [Source:HGNC Symbol;Acc:HGNC:22197]
27. LLPH ENSGALG00000019358 20976 0.845 - - - - - - 0.845 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
28. MRPL30 ENSGALG00000016760 16965 0.843 - - - - - - 0.843 - - - mitochondrial ribosomal protein L30
29. TULP4 ENSGALG00000037377 563 0.843 - - - - - - - - 0.843 - tubby like protein 4 [Source:HGNC Symbol;Acc:HGNC:15530]
30. FANCL ENSGALG00000030022 7423 0.842 - - - - - - 0.842 - - - FA complementation group L [Source:NCBI gene;Acc:421202]
31. PSMD3 ENSGALG00000033162 25615 0.842 - - - - - - 0.842 - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
32. PTPMT1 ENSGALG00000008091 6160 0.839 - - - - - - 0.839 - - - protein tyrosine phosphatase, mitochondrial 1 [Source:NCBI gene;Acc:423181]
33. TLN1 ENSGALG00000002548 489 0.838 - - - - - - - - 0.838 - talin 1 [Source:NCBI gene;Acc:395194]
34. CHAMP1 ENSGALG00000016813 508 0.837 - - - - - - - - 0.837 - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
35. LRRC71 ENSGALG00000027351 695 0.836 - - - - - - - - 0.836 - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
36. RBM17 ENSGALG00000006332 12656 0.834 - - - - - - 0.834 - - - RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]
37. FBXL17 ENSGALG00000000276 2443 0.833 - - - - - - 0.833 - - - F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
38. ZNF706 ENSGALG00000041200 844 0.831 - - - - - - - - 0.831 - zinc finger protein 706 [Source:NCBI gene;Acc:768824]
39. HNRNPH3 ENSGALG00000003947 28724 0.831 - - - - - - - - 0.831 - heterogeneous nuclear ribonucleoprotein H3 [Source:NCBI gene;Acc:423686]
40. EIF2B EIF2B 28702 0.83 - - - - - - 0.830 - - -
41. EIF4A2 ENSGALG00000008684 58507 0.828 - - - - - - 0.828 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
42. CHMP3 ENSGALG00000015805 11581 0.827 - - - - - - 0.827 - - - charged multivesicular body protein 3
43. NDUFS1 ENSGALG00000008606 7898 0.826 - - - - - - 0.826 - - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:NCBI gene;Acc:424102]
44. CZH9ORF80 CZH9ORF80 12760 0.826 - - - - - - 0.826 - - -
45. EXOSC9 ENSGALG00000011884 3403 0.824 - - - - - - 0.824 - - - exosome component 9 [Source:NCBI gene;Acc:619530]
46. ESD ENSGALG00000016991 11289 0.824 - - - - - - 0.824 - - - esterase D [Source:NCBI gene;Acc:418856]
47. ACBD3 ENSGALG00000009246 8405 0.823 - - - - - - 0.823 - - - acyl-CoA binding domain containing 3 [Source:NCBI gene;Acc:421317]
48. THOP1 ENSGALG00000041934 10122 0.823 - - - - - - 0.823 - - - thimet oligopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:11793]
49. ENY2 ENSGALG00000036618 30314 0.822 - - - - - - 0.822 - - - ENY2, transcription and export complex 2 subunit [Source:NCBI gene;Acc:420275]
50. DTX3L ENSGALG00000012075 399 0.821 - - - - - - - - 0.821 - deltex E3 ubiquitin ligase 3L [Source:HGNC Symbol;Acc:HGNC:30323]
51. RPF2 ENSGALG00000037087 12788 0.82 - - - - - - 0.820 - - - ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
52. PARP1 ENSGALG00000009228 39433 0.82 - - - - - - 0.820 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
53. TRIM3 ENSGALG00000034004 110 0.819 - - - - - - - - 0.819 - tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
54. TRIP11 ENSGALG00000010763 3146 0.819 - - - - - - - - 0.819 - thyroid hormone receptor interactor 11 [Source:HGNC Symbol;Acc:HGNC:12305]
55. ATG5 ENSGALG00000015387 7752 0.814 - - - - - - 0.814 - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
56. UQCRH ENSGALG00000017380 55734 0.812 - - - - - - 0.812 - - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
57. FLRT3 ENSGALG00000008716 593 0.812 - - - - - - - - 0.812 - fibronectin leucine rich transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:3762]
58. RIT1 ENSGALG00000014647 7174 0.812 - - - - - - - - 0.812 - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
59. GLO1 ENSGALG00000010127 31662 0.812 - - - - - - 0.812 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
60. MRPL20 ENSGALG00000001542 28764 0.811 - - - - - - 0.811 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
61. THAP5 ENSGALG00000009494 6540 0.811 - - - - - - 0.811 - - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
62. CISD1 ENSGALG00000002705 999 0.811 - - - - - - - - 0.811 - CDGSH iron sulfur domain 1 [Source:NCBI gene;Acc:423642]
63. COMMD4 ENSGALG00000001572 31664 0.81 - - - - - - 0.810 - - - COMM domain containing 4 [Source:NCBI gene;Acc:770048]
64. NDUFA12 ENSGALG00000011325 19807 0.81 - - - - - - 0.810 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
65. INTS12 ENSGALG00000010575 2976 0.809 - - - - - - 0.809 - - - integrator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:25067]
66. GATD3A ENSGALG00000016918 24760 0.809 - - - - - - 0.809 - - - glutamine amidotransferase like class 1 domain containing 3A [Source:NCBI gene;Acc:418811]
67. RIOK2 ENSGALG00000015288 6280 0.809 - - - - - - 0.809 - - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
68. SF3A2 ENSGALG00000021679 12580 0.809 - - - - - - 0.809 - - - splicing factor 3a subunit 2 [Source:NCBI gene;Acc:420077]
69. TERF2 ENSGALG00000000657 7865 0.808 - - - - - - 0.808 - - - telomeric repeat binding factor 2 [Source:NCBI gene;Acc:395598]
70. KIF2C ENSGALG00000010120 8999 0.808 - - - - - - 0.808 - - - kinesin family member 2C, transcript variant X1
71. EXOC8 ENSGALG00000043280 3596 0.807 - - - - - - 0.807 - - - exocyst complex component 8 [Source:NCBI gene;Acc:421531]
72. TTYH2 ENSGALG00000026940 15628 0.807 - - - - - - 0.807 - - - tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]
73. RANGAP1 ENSGALG00000011966 20170 0.807 - - - - - - 0.807 - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
74. COBRA1 COBRA1 4600 0.805 - - - - - - 0.805 - - -
75. XPOT ENSGALG00000009835 2953 0.804 - - - - - - - - 0.804 - exportin for tRNA [Source:NCBI gene;Acc:417824]
76. MAP3K5 ENSGALG00000013892 565 0.804 - - - - - - - - 0.804 - mitogen-activated protein kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6857]
77. GSTA3 ENSGALG00000016325 1254 0.804 - - - - - - - - 0.804 - glutathione S-transferase alpha 3 [Source:NCBI gene;Acc:414896]
78. IFT88 1241 0.803 - - - - - - - - 0.803 - intraflagellar transport 88, transcript variant X3
79. RUFY2 1442 0.803 - - - - - - - - 0.803 - RUN and FYVE domain containing 2, transcript variant X1
80. EBNA1BP2 ENSGALG00000009045 17453 0.803 - - - - - - 0.803 - - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
81. USP45 ENSGALG00000015478 3101 0.803 - - - - - - 0.803 - - - ubiquitin specific peptidase 45 [Source:NCBI gene;Acc:421793]
82. MZT1 ENSGALG00000016932 9269 0.803 - - - - - - 0.803 - - - mitotic spindle organizing protein 1 [Source:NCBI gene;Acc:418822]
83. TMED2 ENSGALG00000003307 20704 0.803 - - - - - - 0.803 - - - transmembrane p24 trafficking protein 2 [Source:NCBI gene;Acc:416821]
84. ADRM1 ENSGALG00000005200 5417 0.802 - - - - - - 0.802 - - - adhesion regulating molecule 1 [Source:NCBI gene;Acc:395365]
85. FRA10AC1 ENSGALG00000006622 286 0.802 - - - - - - - - 0.802 - FRA10A associated CGG repeat 1 [Source:HGNC Symbol;Acc:HGNC:1162]
86. CSE1L ENSGALG00000004707 20653 0.802 - - - - - - 0.802 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
87. C4BPA ENSGALG00000001175 4278 0.802 - - - - - - 0.802 - - - complement component 4 binding protein, alpha [Source:NCBI gene;Acc:395384]
88. COX7C ENSGALG00000027963 84312 0.802 - - - - - - 0.802 - - - cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
89. SLC25A13 ENSGALG00000009728 8858 0.802 - - - - - - 0.802 - - - solute carrier family 25 member 13 [Source:NCBI gene;Acc:428427]
90. KIAA1217 ENSGALG00000007766 144 0.801 - - - - - - - - 0.801 - KIAA1217 [Source:HGNC Symbol;Acc:HGNC:25428]
91. MTSS1 ENSGALG00000041969 1312 0.801 - - - - - - - - 0.801 - MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
92. DDX18 ENSGALG00000012147 12463 0.801 - - - - - - - - 0.801 - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
93. LSM5 ENSGALG00000041625 22307 0.8 - - - - - - 0.800 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
94. GLI2 ENSGALG00000011630 3347 0.8 - - - - - - 0.800 - - - GLI family zinc finger 2 [Source:NCBI gene;Acc:395956]
95. RPL36AL ENSGALG00000004952 205590 0.8 - - - - - - 0.800 - - - ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
96. LARP7 ENSGALG00000012048 8393 0.8 - - - - - - 0.800 - - - La ribonucleoprotein domain family member 7 [Source:HGNC Symbol;Acc:HGNC:24912]
97. CUL3 ENSGALG00000005108 9571 0.799 - - - - - - 0.799 - - - cullin 3 [Source:HGNC Symbol;Acc:HGNC:2553]
98. LRP12 ENSGALG00000033630 2534 0.799 - - - - - - - - 0.799 - LDL receptor related protein 12 [Source:HGNC Symbol;Acc:HGNC:31708]
99. PLEKHB2 ENSGALG00000002169 3832 0.799 - - - - - - 0.799 - - - pleckstrin homology domain containing B2 [Source:NCBI gene;Acc:424758]
100. RBBP4 ENSGALG00000003522 72455 0.799 - - - - - - 0.799 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]

There are 608 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA