Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_posterior_slice_3, section s39.

Sample reads: 124,243. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 12321.75 99174.62
2. MT-ND5 MT-ND5 8555.63 68862.08
3. MT-CYB MT-CYB 7818.79 62931.44
4. MT-ND4 MT-ND4 7000.06 56341.69
5. MT-ND1 MT-ND1 5731.05 46127.76
6. MT-CO3 MT-CO3 4175.48 33607.37
7. gga-mir-3527 gga-mir-3527 3684.24 29653.51
8. MT-CO1 MT-CO1 1883.06 15156.27
9. gga-mir-3533 ENSGALG00000027736 1678.38 13508.85 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
10. GAPDH ENSGALG00000014442 1269.02 10214.02 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
11. PPIA ENSGALG00000028600 1105.27 8896.04 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
12. EEF1A EEF1A 1023.40 8237.09
13. MT-ND3 MT-ND3 818.72 6589.67
14. MT-ND2 MT-ND2 777.78 6260.15
15. KRT19 ENSGALG00000019719 573.10 4612.74 keratin 19 [Source:NCBI gene;Acc:395861]
16. NME2 ENSGALG00000002932 532.17 4283.30 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
17. RPL18A 532.17 4283.30 ribosomal protein L18a
18. RPL7A ENSGALG00000003197 491.23 3953.78 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
19. ANXA2 ENSGALG00000003770 450.30 3624.35 annexin A2 [Source:NCBI gene;Acc:396297]
20. EIF4G2 ENSGALG00000005587 450.30 3624.35 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
21. ENO1 ENSGALG00000002377 409.36 3294.83 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
22. MDK ENSGALG00000008367 409.36 3294.83 midkine [Source:NCBI gene;Acc:423196]
23. RPL8 ENSGALG00000016232 409.36 3294.83 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
24. DSP ENSGALG00000012790 368.42 2965.32 desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
25. RPL5 ENSGALG00000005922 368.42 2965.32 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
26. RPL32 ENSGALG00000027142 327.49 2635.88 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
27. RPS10 ENSGALG00000002813 327.49 2635.88 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
28. RPS3 ENSGALG00000017330 327.49 2635.88 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
29. RPL13 ENSGALG00000006179 286.55 2306.37 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
30. RPL21 ENSGALG00000027035 286.55 2306.37 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
31. RPL7 ENSGALG00000035252 286.55 2306.37 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
32. RPS15 ENSGALG00000015195 286.55 2306.37 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
33. RPS16 ENSGALG00000026490 286.55 2306.37 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
34. RPS20 ENSGALG00000014432 286.55 2306.37 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
35. RPS7 ENSGALG00000016392 286.55 2306.37 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
36. STMN1 ENSGALG00000001475 286.55 2306.37 stathmin 1 [Source:NCBI gene;Acc:396057]
37. APLP2 ENSGALG00000001250 245.62 1976.93 amyloid beta precursor like protein 2 [Source:NCBI gene;Acc:419727]
38. CHCHD2 ENSGALG00000002495 245.62 1976.93 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:417544]
39. CIRBP ENSGALG00000030918 245.62 1976.93 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
40. EIF1 ENSGALG00000028517 245.62 1976.93 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
41. EIF3F ENSGALG00000005326 245.62 1976.93 eukaryotic translation initiation factor 3 subunit F
42. ENSGALG00000002696 ENSGALG00000002696 245.62 1976.93
43. MT-ATP8 MT-ATP8 245.62 1976.93
44. RPL15 ENSGALG00000011290 245.62 1976.93 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
45. RPL26 RPL26 245.62 1976.93
46. RPLP1 ENSGALG00000030878 245.62 1976.93 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
47. RPS4 RPS4 245.62 1976.93
48. YWHAB ENSGALG00000004143 245.62 1976.93 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta [Source:NCBI gene;Acc:419190]
49. CCNB2 ENSGALG00000004161 204.68 1647.42 cyclin B2 [Source:NCBI gene;Acc:415400]
50. EIF4EBP1 ENSGALG00000003205 204.68 1647.42 eukaryotic translation initiation factor 4E binding protein 1 [Source:HGNC Symbol;Acc:HGNC:3288]
51. EIF5A2 ENSGALG00000009309 204.68 1647.42 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
52. ETFDH ENSGALG00000009442 204.68 1647.42 electron transfer flavoprotein dehydrogenase [Source:NCBI gene;Acc:428724]
53. FGFR3 ENSGALG00000015708 204.68 1647.42 fibroblast growth factor receptor 3 [Source:NCBI gene;Acc:396515]
54. OAZ OAZ 204.68 1647.42
55. RBMX ENSGALG00000006457 204.68 1647.42 RNA binding motif protein X-linked [Source:NCBI gene;Acc:422248]
56. RPL14 ENSGALG00000043379 204.68 1647.42 ribosomal protein L14
57. RPLP2 ENSGALG00000034811 204.68 1647.42 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
58. SLC35F1 ENSGALG00000029011 204.68 1647.42 solute carrier family 35 member F1 [Source:HGNC Symbol;Acc:HGNC:21483]
59. SPATA2 ENSGALG00000008026 204.68 1647.42 spermatogenesis associated 2 [Source:NCBI gene;Acc:419355]
60. TTR ENSGALG00000015143 204.68 1647.42 transthyretin [Source:NCBI gene;Acc:396277]
61. ATP6V0C ENSGALG00000009229 163.74 1317.90 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
62. CLMP ENSGALG00000006507 163.74 1317.90 CXADR like membrane protein [Source:HGNC Symbol;Acc:HGNC:24039]
63. COL1A2 ENSGALG00000009641 163.74 1317.90 collagen type I alpha 2 chain [Source:NCBI gene;Acc:396243]
64. COX6A1 ENSGALG00000007205 163.74 1317.90 cytochrome c oxidase subunit 6A1 [Source:NCBI gene;Acc:416978]
65. CRHOA CRHOA 163.74 1317.90
66. EIF2S3 ENSGALG00000016340 163.74 1317.90 eukaryotic translation initiation factor 2 subunit gamma [Source:NCBI gene;Acc:418597]
67. ENSGALG00000018384 ENSGALG00000018384 163.74 1317.90
68. FN1 ENSGALG00000003578 163.74 1317.90 fibronectin 1 [Source:NCBI gene;Acc:396133]
69. H2AFZ ENSGALG00000014023 163.74 1317.90 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
70. H3-IX H3-IX 163.74 1317.90
71. IGF2BP3 ENSGALG00000010961 163.74 1317.90 insulin like growth factor 2 mRNA binding protein 3 [Source:NCBI gene;Acc:420617]
72. ITGB1 ENSGALG00000007145 163.74 1317.90 integrin subunit beta 1 [Source:NCBI gene;Acc:374058]
73. KPNA2 ENSGALG00000003584 163.74 1317.90 karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
74. MYL9 ENSGALG00000028567 163.74 1317.90 myosin, light chain 9, regulatory [Source:NCBI gene;Acc:396215]
75. NOL9 ENSGALG00000028958 163.74 1317.90 nucleolar protein 9 [Source:HGNC Symbol;Acc:HGNC:26265]
76. NONO ENSGALG00000005507 163.74 1317.90 non-POU domain containing octamer binding [Source:NCBI gene;Acc:428701]
77. PRPS1 ENSGALG00000004908 163.74 1317.90 phosphoribosyl pyrophosphate synthetase 1
78. RPL3 ENSGALG00000012172 163.74 1317.90 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
79. RPS12 ENSGALG00000013990 163.74 1317.90 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
80. RPS27A ENSGALG00000036790 163.74 1317.90 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
81. RPS6 ENSGALG00000015082 163.74 1317.90 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
82. RPS8 ENSGALG00000010124 163.74 1317.90 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
83. RPSA 163.74 1317.90 ribosomal protein SA
84. RTN4 ENSGALG00000029261 163.74 1317.90 reticulon 4 [Source:NCBI gene;Acc:378790]
85. S100A11 ENSGALG00000036711 163.74 1317.90 S100 calcium binding protein A11 [Source:NCBI gene;Acc:396075]
86. SLC25A6_1 ENSGALG00000016691 163.74 1317.90 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
87. Sep-05 Sep-05 163.74 1317.90
88. VCP ENSGALG00000001986 163.74 1317.90 valosin containing protein [Source:NCBI gene;Acc:427410]
89. YWHAZ ENSGALG00000031387 163.74 1317.90 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
90. ARCN1 ENSGALG00000007430 122.81 988.47 archain 1 [Source:NCBI gene;Acc:770561]
91. ARGLU1 ENSGALG00000016855 122.81 988.47 arginine and glutamate rich 1 [Source:NCBI gene;Acc:418765]
92. ATF4 ENSGALG00000012135 122.81 988.47 activating transcription factor 4 [Source:NCBI gene;Acc:395693]
93. ATN1 ENSGALG00000014554 122.81 988.47 atrophin 1 [Source:HGNC Symbol;Acc:HGNC:3033]
94. ATP6V1G1 ENSGALG00000007190 122.81 988.47 ATPase H+ transporting V1 subunit G1 [Source:NCBI gene;Acc:417249]
95. BCCIP ENSGALG00000006617 122.81 988.47 BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
96. CBX3 ENSGALG00000011038 122.81 988.47 chromobox 3 [Source:NCBI gene;Acc:395355]
97. CCT5 ENSGALG00000013041 122.81 988.47 chaperonin containing TCP1 subunit 5 [Source:NCBI gene;Acc:420930]
98. COPS4 ENSGALG00000011130 122.81 988.47 COP9 signalosome subunit 4 [Source:NCBI gene;Acc:422594]
99. COX6C ENSGALG00000035996 122.81 988.47 cytochrome c oxidase subunit 6C [Source:NCBI gene;Acc:420243]
100. CPSF6 ENSGALG00000019355 122.81 988.47 cleavage and polyadenylation specific factor 6 [Source:NCBI gene;Acc:417844]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA