Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for FN1

Gene Name Gene ID Reads Annotation
FN1 ENSGALG00000003578 37024 fibronectin 1 [Source:NCBI gene;Acc:396133]











Genes with expression patterns similar to FN1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. FN1 ENSGALG00000003578 37024 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 fibronectin 1 [Source:NCBI gene;Acc:396133]
2. SPARC ENSGALG00000004184 36410 1.496 - - - 0.709 0.787 - - - - - secreted protein acidic and cysteine rich [Source:NCBI gene;Acc:386571]
3. TAGLN ENSGALG00000011902 12030 1.444 - - - - 0.724 - - 0.720 - - transgelin [Source:NCBI gene;Acc:396490]
4. COL1A2 ENSGALG00000009641 46236 1.42 - - - 0.710 0.710 - - - - - collagen type I alpha 2 chain [Source:NCBI gene;Acc:396243]
5. NSA2 ENSGALG00000014942 45193 0.988 - - - - - - 0.988 - - - NSA2, ribosome biogenesis homolog [Source:NCBI gene;Acc:427206]
6. AHCY ENSGALG00000033677 35555 0.984 - - - - - - 0.984 - - - adenosylhomocysteinase [Source:HGNC Symbol;Acc:HGNC:343]
7. NUCKS1 ENSGALG00000000708 80882 0.982 - - - - - - 0.982 - - - nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:NCBI gene;Acc:404775]
8. DNMT3B ENSGALG00000041461 12959 0.866 - - - - - - 0.866 - - - DNA methyltransferase 3 beta [Source:NCBI gene;Acc:419287]
9. ENSGALG00000001861 ENSGALG00000001861 10150 0.865 - - - - - - 0.865 - - -
10. MRPS27 ENSGALG00000015002 6541 0.864 - - - - - - 0.864 - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
11. DHX36 ENSGALG00000043082 17619 0.864 - - - - - - 0.864 - - - DEAH-box helicase 36 [Source:HGNC Symbol;Acc:HGNC:14410]
12. PIK3C2B ENSGALG00000037043 4522 0.863 - - - - - - 0.863 - - - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:HGNC Symbol;Acc:HGNC:8972]
13. RAP1GDS1 ENSGALG00000012222 10078 0.863 - - - - - - 0.863 - - - rap1 GTPase-GDP dissociation stimulator 1 [Source:NCBI gene;Acc:422701]
14. TUSC3 ENSGALG00000013674 2848 0.863 - - - - - - 0.863 - - - tumor suppressor candidate 3 [Source:HGNC Symbol;Acc:HGNC:30242]
15. GBX-1 GBX-1 1430 0.863 - - - - - - 0.863 - - -
16. TDP2 ENSGALG00000013637 6595 0.863 - - - - - - 0.863 - - - tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
17. ECE-1 ECE-1 3057 0.863 - - - - - - 0.863 - - -
18. UTP14A ENSGALG00000024039 8532 0.863 - - - - - - 0.863 - - - UTP14A small subunit processome component
19. PRRC2B 1997 0.863 - - - - - - 0.863 - - - proline rich coiled-coil 2B, transcript variant X12
20. WDYHV1 ENSGALG00000030059 2961 0.863 - - - - - - 0.863 - - - WDYHV motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25490]
21. C1H21ORF33 ENSGALG00000019171 8910 0.862 - - - - - - 0.862 - - - chromosome 1 open reading frame, human C21orf33 [Source:NCBI gene;Acc:418552]
22. THBS4 ENSGALG00000014804 4228 0.862 - - - - - - 0.862 - - - Gallus gallus thrombospondin 4 (THBS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321549]
23. NAP1L4 ENSGALG00000006446 10868 0.862 - - - - - - 0.862 - - - nucleosome assembly protein 1 like 4 [Source:NCBI gene;Acc:423087]
24. HSPA14 ENSGALG00000035201 7372 0.862 - - - - - - 0.862 - - - heat shock protein family A (Hsp70) member 14
25. MAPKAPK2 ENSGALG00000000883 6174 0.862 - - - - - - 0.862 - - - mitogen-activated protein kinase-activated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:6887]
26. KIAA0922 4430 0.862 - - - - - - 0.862 - - - KIAA0922, transcript variant X4
27. ARCN1 ENSGALG00000007430 21499 0.861 - - - - - - 0.861 - - - archain 1 [Source:NCBI gene;Acc:770561]
28. PRRX1 ENSGALG00000003324 4859 0.861 - - - - - - 0.861 - - - paired related homeobox 1 [Source:NCBI gene;Acc:373941]
29. AURKAIP1 ENSGALG00000001555 14715 0.861 - - - - - - 0.861 - - - aurora kinase A interacting protein 1 [Source:NCBI gene;Acc:419415]
30. AP2M1 ENSGALG00000008432 16249 0.858 - - - - - - 0.858 - - - adaptor related protein complex 2 mu 1 subunit [Source:NCBI gene;Acc:770246]
31. KIF2A ENSGALG00000014737 16391 0.857 - - - - - - 0.857 - - - kinesin heavy chain member 2A [Source:NCBI gene;Acc:427156]
32. EEF1E1 ENSGALG00000012781 22615 0.855 - - - - - - 0.855 - - - eukaryotic translation elongation factor 1 epsilon 1
33. ENSGALG00000021694 ENSGALG00000021694 26011 0.854 - - - - - - 0.854 - - -
34. DYNLRB1 ENSGALG00000034509 28361 0.853 - - - - - - 0.853 - - - dynein light chain roadblock-type 1
35. gga-mir-762 ENSGALG00000025437 24823 0.852 - - - - - - 0.852 - - - gga-mir-762 [Source:miRBase;Acc:MI0008209]
36. CHMP4B ENSGALG00000002095 17422 0.851 - - - - - - 0.851 - - - charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
37. BRT-1 BRT-1 26083 0.851 - - - - - - 0.851 - - -
38. RPL39 ENSGALG00000008620 63315 0.847 - - - - - - 0.847 - - - ribosomal protein L39 [Source:NCBI gene;Acc:374132]
39. CWC15 ENSGALG00000017207 30922 0.846 - - - - - - 0.846 - - - CWC15 spliceosome associated protein homolog [Source:NCBI gene;Acc:418996]
40. UBE2C ENSGALG00000026380 27639 0.845 - - - - - - 0.845 - - - ubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]
41. MTX2 ENSGALG00000009264 17304 0.841 - - - - - - 0.841 - - - metaxin 2 [Source:HGNC Symbol;Acc:HGNC:7506]
42. PSMA7 ENSGALG00000030411 42436 0.84 - - - - - - 0.840 - - - proteasome subunit alpha 7 [Source:NCBI gene;Acc:395318]
43. HMGN5 ENSGALG00000007131 171006 0.84 - - - - - - 0.840 - - - high mobility group nucleosome binding domain 5, transcript variant X1
44. ATF4 ENSGALG00000012135 53361 0.835 - - - - - - 0.835 - - - activating transcription factor 4 [Source:NCBI gene;Acc:395693]
45. TRA2B ENSGALG00000006531 40566 0.828 - - - - - - 0.828 - - - transformer 2 beta homolog (Drosophila) [Source:NCBI gene;Acc:395403]
46. CBX3 ENSGALG00000011038 40977 0.827 - - - - - - 0.827 - - - chromobox 3 [Source:NCBI gene;Acc:395355]
47. GAS2 ENSGALG00000003655 2672 0.804 - - - - - 0.804 - - - - growth arrest specific 2 [Source:NCBI gene;Acc:422970]
48. ACTN1 ENSGALG00000042458 10477 0.784 - - - - 0.784 - - - - - actinin, alpha 1 [Source:NCBI gene;Acc:373918]
49. RPL19 ENSGALG00000001658 277294 0.762 - - - - - - 0.762 - - - ribosomal protein L19 [Source:NCBI gene;Acc:420003]
50. MDK ENSGALG00000008367 316136 0.757 - - - - 0.757 - - - - - midkine [Source:NCBI gene;Acc:423196]
51. ITGB1 ENSGALG00000007145 19551 0.757 - - - - 0.757 - - - - - integrin subunit beta 1 [Source:NCBI gene;Acc:374058]
52. PEF1 ENSGALG00000040519 8522 0.748 - - - - - - - 0.748 - - penta-EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30009]
53. LMO7 ENSGALG00000016920 3809 0.745 - - - - - - - - - 0.745 LIM domain 7 [Source:HGNC Symbol;Acc:HGNC:6646]
54. ANP32B ENSGALG00000037483 190705 0.743 - - - - - - 0.743 - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
55. S100A11 ENSGALG00000036711 23454 0.739 - - - - 0.739 - - - - - S100 calcium binding protein A11 [Source:NCBI gene;Acc:396075]
56. SHISA5 ENSGALG00000004661 8573 0.738 - - - - 0.738 - - - - - shisa family member 5 [Source:NCBI gene;Acc:415948]
57. MMP2 ENSGALG00000003580 13120 0.736 - - - - 0.736 - - - - - matrix metallopeptidase 2 [Source:NCBI gene;Acc:386583]
58. HAPLN1 ENSGALG00000015627 14942 0.736 - - - - 0.736 - - - - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
59. OIT3 ENSGALG00000004345 4886 0.73 - - - - - - - 0.730 - - oncoprotein induced transcript 3 [Source:HGNC Symbol;Acc:HGNC:29953]
60. PDGFRA ENSGALG00000013929 12501 0.726 - - - - 0.726 - - - - - platelet-derived growth factor receptor, alpha polypeptide [Source:NCBI gene;Acc:395509]
61. FUNDC1 ENSGALG00000028187 10511 0.725 - - - - - - - 0.725 - - FUN14 domain containing 1 [Source:NCBI gene;Acc:418558]
62. CRTAP ENSGALG00000034163 6453 0.722 - - - - 0.722 - - - - - cartilage associated protein [Source:NCBI gene;Acc:395992]
63. CDH3 5050 0.717 - - - - - 0.717 - - - - cadherin 3
64. SDC3 ENSGALG00000035184 14096 0.717 - - - - - - - - - 0.717 syndecan 3 [Source:NCBI gene;Acc:396343]
65. ATCAY ENSGALG00000001812 1454 0.715 - - - - - 0.715 - - - - ATCAY, caytaxin [Source:HGNC Symbol;Acc:HGNC:779]
66. DAP ENSGALG00000013002 6815 0.714 - - - - - - - 0.714 - - death associated protein [Source:NCBI gene;Acc:420923]
67. FRZB ENSGALG00000002763 14833 0.712 - - - - 0.712 - - - - - frizzled related protein [Source:NCBI gene;Acc:395545]
68. TMED10 ENSGALG00000010318 9317 0.71 - - - - - - - - - 0.710 transmembrane p24 trafficking protein 10 [Source:NCBI gene;Acc:423362]
69. TGM2 ENSGALG00000006775, ENSGALG00000029343 2347 0.708 - - - - 0.708 - - - - - transglutaminase 2 [Source:NCBI gene;Acc:396432]
70. C1QTNF3 ENSGALG00000027887 8646 0.704 - - - - - - 0.704 - - - C1q and tumor necrosis factor related protein 3, transcript variant X1
71. COL6A1 ENSGALG00000005974 1991 0.702 - - - - - - - - - 0.702 collagen type VI alpha 1 chain [Source:NCBI gene;Acc:396000]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA