Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Chicken_E3_posterior_slice_3, section s36.

Sample reads: 124,236. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 6329.53 50950.51
2. MT-CO3 MT-CO3 5344.00 43017.33
3. MT-ND5 MT-ND5 3796.31 30558.97
4. gga-mir-3527 gga-mir-3527 2827.24 22758.29
5. MT-CYB MT-CYB 2363.87 19028.33
6. MT-ND4 MT-ND4 2307.42 18573.93
7. gga-mir-3533 ENSGALG00000027736 2279.20 18346.76 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
8. MT-CO1 MT-CO1 1924.03 15487.77
9. MT-ND1 MT-ND1 1865.22 15014.37
10. MT-ND3 MT-ND3 1832.30 14749.38
11. EEF1A EEF1A 1768.79 14238.14
12. KRT19 ENSGALG00000019719 1199.58 9656.20 keratin 19 [Source:NCBI gene;Acc:395861]
13. GAPDH ENSGALG00000014442 1136.07 9144.97 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
14. PPIA ENSGALG00000028600 1058.45 8520.15 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
15. NME2 ENSGALG00000002932 872.63 7024.37 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
16. RPL5 ENSGALG00000005922 691.52 5566.49 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
17. TMSB4X ENSGALG00000026383 543.34 4373.70 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
18. ENSGALG00000018384 ENSGALG00000018384 522.17 4203.29
19. RPL8 ENSGALG00000016232 515.11 4146.46 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
20. RPL7A ENSGALG00000003197 491.59 3957.13 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
21. RPS3 ENSGALG00000017330 484.54 3900.38 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
22. RPS20 ENSGALG00000014432 470.42 3786.72 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
23. TTR ENSGALG00000015143 449.25 3616.31 transthyretin [Source:NCBI gene;Acc:396277]
24. RPS15 ENSGALG00000015195 439.84 3540.56 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
25. RPL15 ENSGALG00000011290 435.14 3502.73 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
26. ENO1 ENSGALG00000002377 425.73 3426.98 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
27. RPS23 ENSGALG00000015617 416.32 3351.23 ribosomal protein S23
28. LUM ENSGALG00000011271 406.92 3275.56 lumican [Source:NCBI gene;Acc:417891]
29. RPS4 RPS4 406.92 3275.56
30. RPS7 ENSGALG00000016392 397.51 3199.82 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
31. CNN3 ENSGALG00000005597 385.75 3105.15 Gallus gallus calponin 3 (CNN3), mRNA. [Source:RefSeq mRNA;Acc:NM_001354671]
32. RPS10 ENSGALG00000002813 385.75 3105.15 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
33. MDK ENSGALG00000008367 381.04 3067.24 midkine [Source:NCBI gene;Acc:423196]
34. S100A11 ENSGALG00000036711 381.04 3067.24 S100 calcium binding protein A11 [Source:NCBI gene;Acc:396075]
35. RPL7 ENSGALG00000035252 373.99 3010.49 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
36. HBE 369.28 2972.58 hemoglobin subunit epsilon
37. RPL26 RPL26 364.58 2934.74
38. STMN1 ENSGALG00000001475 362.23 2915.83 stathmin 1 [Source:NCBI gene;Acc:396057]
39. MT-ND2 MT-ND2 355.17 2858.99
40. RPS27A ENSGALG00000036790 355.17 2858.99 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
41. HBG1 HBG1 338.70 2726.42
42. RPL31 ENSGALG00000016775 324.59 2612.84 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
43. RPL18A 317.54 2556.09 ribosomal protein L18a
44. RPL27A ENSGALG00000005948 312.83 2518.17 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
45. EIF4G2 ENSGALG00000005587 310.48 2499.26 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
46. RPL23 ENSGALG00000001634 308.13 2480.34 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
47. RPL35A ENSGALG00000007611, ENSGALG00000041230 308.13 2480.34 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
48. RPSA 308.13 2480.34 ribosomal protein SA
49. RPS12 ENSGALG00000013990 305.77 2461.34 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
50. CIRBP ENSGALG00000030918 301.07 2423.51 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
51. RPS11 ENSGALG00000017299 301.07 2423.51 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
52. HBZ ENSGALG00000023740 298.72 2404.59 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
53. EEF1B2 ENSGALG00000008590 296.37 2385.68 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
54. RPL27 ENSGALG00000002837 294.01 2366.68 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
55. ANXA2 ENSGALG00000003770 291.66 2347.76 annexin A2 [Source:NCBI gene;Acc:396297]
56. RPS29 ENSGALG00000012229 289.31 2328.84 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
57. RPL14 ENSGALG00000043379 282.25 2272.01 ribosomal protein L14
58. H3-IX H3-IX 265.79 2139.52
59. RPL13 ENSGALG00000006179 265.79 2139.52 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
60. CRHOA CRHOA 263.44 2120.60
61. RPL6 ENSGALG00000004818 263.44 2120.60 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
62. RPL32 ENSGALG00000027142 261.08 2101.60 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
63. RPLP1 ENSGALG00000030878 256.38 2063.77 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
64. RPS16 ENSGALG00000026490 256.38 2063.77 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
65. RPL23A ENSGALG00000003966 251.68 2025.94 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
66. SLC25A6_1 ENSGALG00000016691 249.32 2006.94 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
67. RPL21 ENSGALG00000027035 244.62 1969.11 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
68. ATP6V0C ENSGALG00000009229 239.92 1931.27 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
69. EIF4EBP1 ENSGALG00000003205 237.56 1912.28 eukaryotic translation initiation factor 4E binding protein 1 [Source:HGNC Symbol;Acc:HGNC:3288]
70. RPL10A ENSGALG00000002644 237.56 1912.28 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
71. RPS15A ENSGALG00000006771 235.21 1893.36 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
72. RPL36 ENSGALG00000000474 232.86 1874.44 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
73. RPL38 ENSGALG00000001465 232.86 1874.44 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
74. TPT1 ENSGALG00000028872 232.86 1874.44 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
75. RPL37A ENSGALG00000011472 223.45 1798.69 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
76. RPL4 ENSGALG00000007711 221.10 1779.78 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
77. RPS24 ENSGALG00000004871 221.10 1779.78 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
78. ATP5G3 214.04 1722.95 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
79. DSP ENSGALG00000012790 209.34 1685.11 desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
80. RPS6 ENSGALG00000015082 209.34 1685.11 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
81. PNRC1 ENSGALG00000015780 204.63 1647.20 proline rich nuclear receptor coactivator 1 [Source:NCBI gene;Acc:421817]
82. ENSGALG00000028992 ENSGALG00000028992 202.28 1628.28
83. TXN ENSGALG00000015704 202.28 1628.28 thioredoxin [Source:NCBI gene;Acc:396437]
84. RPL29 ENSGALG00000026978 197.58 1590.45 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
85. ENSGALG00000018386 ENSGALG00000018386 195.23 1571.53
86. FTH FTH 195.23 1571.53
87. HMGB1 ENSGALG00000042875 192.87 1552.54 high mobility group box 1 [Source:NCBI gene;Acc:395724]
88. H2AFZ ENSGALG00000014023 190.52 1533.62 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
89. EIF3F ENSGALG00000005326 183.46 1476.79 eukaryotic translation initiation factor 3 subunit F
90. GUCA2A ENSGALG00000027269 183.46 1476.79 guanylate cyclase activator 2A [Source:NCBI gene;Acc:419498]
91. ACTG1_1 ENSGALG00000001381 176.41 1420.04 Actin, gamma 1 [Source:NCBI gene;Acc:415296]
92. ENSGALG00000002696 ENSGALG00000002696 176.41 1420.04
93. NDUFB9 ENSGALG00000042242 176.41 1420.04 NADH:ubiquinone oxidoreductase subunit B9 [Source:HGNC Symbol;Acc:HGNC:7704]
94. RAN ENSGALG00000002569 176.41 1420.04 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
95. RPS14 ENSGALG00000004588 176.41 1420.04 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
96. RPS21 ENSGALG00000005338 176.41 1420.04 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
97. MT-ND6 MT-ND6 174.06 1401.12
98. RPL3 ENSGALG00000012172 174.06 1401.12 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
99. MYL9 ENSGALG00000028567 169.35 1363.21 myosin, light chain 9, regulatory [Source:NCBI gene;Acc:396215]
100. PRDX1 ENSGALG00000010243 169.35 1363.21 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA