Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Chicken_E3_posterior_slice_3, section s17.

Sample reads: 124,246. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 5674.80 45676.32
2. MT-ATP6 MT-ATP6 3876.51 31201.93
3. MT-CYB MT-CYB 2170.04 17466.60
4. EEF1A EEF1A 2109.57 16979.88
5. MT-CO1 MT-CO1 1995.36 16060.60
6. MT-ND4 MT-ND4 1869.95 15051.18
7. gga-mir-3527 gga-mir-3527 1856.51 14943.00
8. MT-ND5 MT-ND5 1755.74 14131.91
9. GAPDH ENSGALG00000014442 1719.91 13843.51 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
10. MT-ND3 MT-ND3 1639.29 13194.60
11. MT-ND1 MT-ND1 1256.34 10112.25
12. gga-mir-3533 ENSGALG00000027736 1177.96 9481.37 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
13. RPL5 ENSGALG00000005922 851.00 6849.68 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
14. NME2 ENSGALG00000002932 747.98 6020.47 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
15. RPL8 ENSGALG00000016232 678.56 5461.71 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
16. RPS3 ENSGALG00000017330 662.88 5335.50 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
17. RPL26 RPL26 647.20 5209.30
18. PPIA ENSGALG00000028600 613.61 4938.93 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
19. RPL7A ENSGALG00000003197 609.13 4902.87 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
20. RPL7 ENSGALG00000035252 544.19 4380.17 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
21. RPS7 ENSGALG00000016392 539.71 4344.11 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
22. STMN1 ENSGALG00000001475 510.60 4109.81 stathmin 1 [Source:NCBI gene;Acc:396057]
23. EIF4G2 ENSGALG00000005587 503.88 4055.72 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
24. RPS23 ENSGALG00000015617 499.40 4019.66 ribosomal protein S23
25. RPL31 ENSGALG00000016775 485.96 3911.48 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
26. RPS4 RPS4 485.96 3911.48
27. RPS20 ENSGALG00000014432 479.25 3857.47 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
28. RPL27A ENSGALG00000005948 461.33 3713.23 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
29. RPL15 ENSGALG00000011290 456.85 3677.17 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
30. ENO1 ENSGALG00000002377 434.46 3496.96 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
31. RAN ENSGALG00000002569 421.02 3388.78 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
32. RPS10 ENSGALG00000002813 407.58 3280.60 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
33. RPS15A ENSGALG00000006771 407.58 3280.60 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
34. RPL18A 403.10 3244.54 ribosomal protein L18a
35. CIRBP ENSGALG00000030918 398.62 3208.48 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
36. RPS12 ENSGALG00000013990 398.62 3208.48 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
37. RPS16 ENSGALG00000026490 396.38 3190.45 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
38. MDK ENSGALG00000008367 385.19 3100.38 midkine [Source:NCBI gene;Acc:423196]
39. SNRPG ENSGALG00000028409 385.19 3100.38 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
40. RPS6 ENSGALG00000015082 382.95 3082.36 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
41. ENSGALG00000018384 ENSGALG00000018384 365.03 2938.12
42. MT-ND2 MT-ND2 349.36 2811.99
43. RPS11 ENSGALG00000017299 349.36 2811.99 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
44. RPL21 ENSGALG00000027035 338.16 2721.84 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
45. FKBP4 ENSGALG00000014331 331.44 2667.75 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
46. RPS29 ENSGALG00000012229 331.44 2667.75 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
47. RPS15 ENSGALG00000015195 329.20 2649.72 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
48. NDUFB9 ENSGALG00000042242 324.72 2613.66 NADH:ubiquinone oxidoreductase subunit B9 [Source:HGNC Symbol;Acc:HGNC:7704]
49. RPL38 ENSGALG00000001465 320.24 2577.60 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
50. TMSB4X ENSGALG00000026383 320.24 2577.60 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
51. RPL27 ENSGALG00000002837 315.76 2541.54 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
52. RPL23 ENSGALG00000001634 309.05 2487.54 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
53. HMGN5 ENSGALG00000007131 306.81 2469.51 high mobility group nucleosome binding domain 5, transcript variant X1
54. EEF1B2 ENSGALG00000008590 302.33 2433.45 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
55. H2AFZ ENSGALG00000014023 302.33 2433.45 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
56. ENSGALG00000028992 ENSGALG00000028992 295.61 2379.36
57. ATP6V0C ENSGALG00000009229 293.37 2361.33 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
58. ENSGALG00000018386 ENSGALG00000018386 293.37 2361.33
59. RPL10A ENSGALG00000002644 293.37 2361.33 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
60. RPL32 ENSGALG00000027142 291.13 2343.30 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
61. RPS27A ENSGALG00000036790 286.65 2307.24 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
62. H3-IX H3-IX 284.41 2289.21
63. HBG1 HBG1 282.17 2271.18
64. RPL14 ENSGALG00000043379 282.17 2271.18 ribosomal protein L14
65. RPL13 ENSGALG00000006179 273.21 2199.06 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
66. SLC25A6_1 ENSGALG00000016691 264.26 2127.02 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
67. RPS14 ENSGALG00000004588 262.02 2108.99 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
68. RPL29 ENSGALG00000026978 257.54 2072.93 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
69. RPSA 255.30 2054.90 ribosomal protein SA
70. HBE 253.06 2036.87 hemoglobin subunit epsilon
71. MIF ENSGALG00000006326 248.58 2000.81 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
72. RPL37 ENSGALG00000014833 246.34 1982.78 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
73. RPS24 ENSGALG00000004871 246.34 1982.78 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
74. ENSGALG00000002696 ENSGALG00000002696 244.10 1964.75
75. ERH ENSGALG00000017384 237.38 1910.67 ERH, mRNA splicing and mitosis factor [Source:NCBI gene;Acc:423262]
76. RPL23A ENSGALG00000003966 237.38 1910.67 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
77. SNRPE ENSGALG00000000137 235.14 1892.64 small nuclear ribonucleoprotein polypeptide E [Source:NCBI gene;Acc:396180]
78. ANP32B ENSGALG00000037483 232.90 1874.61 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
79. BTF3L4 ENSGALG00000010570 232.90 1874.61 basic transcription factor 3 like 4 [Source:NCBI gene;Acc:424638]
80. RPL35A ENSGALG00000007611, ENSGALG00000041230 232.90 1874.61 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
81. RPL36 ENSGALG00000000474 228.43 1838.63 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
82. RPL6 ENSGALG00000004818 228.43 1838.63 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
83. CNN3 ENSGALG00000005597 226.19 1820.60 Gallus gallus calponin 3 (CNN3), mRNA. [Source:RefSeq mRNA;Acc:NM_001354671]
84. CRHOA CRHOA 226.19 1820.60
85. HNRNPDL ENSGALG00000023199 226.19 1820.60 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
86. RPL4 ENSGALG00000007711 226.19 1820.60 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
87. EIF4EBP1 ENSGALG00000003205 223.95 1802.57 eukaryotic translation initiation factor 4E binding protein 1 [Source:HGNC Symbol;Acc:HGNC:3288]
88. HSPE1 ENSGALG00000009070 221.71 1784.54 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
89. ATP5G3 217.23 1748.48 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
90. LDHB ENSGALG00000035836 208.27 1676.36 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
91. HMGB1 ENSGALG00000042875 206.03 1658.33 high mobility group box 1 [Source:NCBI gene;Acc:395724]
92. RPLP1 ENSGALG00000030878 203.79 1640.30 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
93. RPS3A ENSGALG00000010077 203.79 1640.30 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
94. CDK1 ENSGALG00000003085 201.55 1622.27 cyclin dependent kinase 1 [Source:NCBI gene;Acc:396252]
95. CCT6 CCT6 197.07 1586.21
96. RPS8 ENSGALG00000010124 197.07 1586.21 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
97. RPS21 ENSGALG00000005338 188.11 1514.09 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
98. KRT19 ENSGALG00000019719 179.16 1442.05 keratin 19 [Source:NCBI gene;Acc:395861]
99. RPL12 ENSGALG00000008806 176.92 1424.02 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
100. RPL36AL ENSGALG00000004952 176.92 1424.02 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA