Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Chicken_E3_posterior_slice_3, section s12.

Sample reads: 124,244. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 6472.32 52098.53
2. MT-ND5 MT-ND5 4713.62 37941.99
3. MT-CO3 MT-CO3 4483.55 36090.05
4. MT-CYB MT-CYB 2854.00 22973.09
5. MT-ND4 MT-ND4 2714.97 21853.98
6. gga-mir-3527 gga-mir-3527 2583.71 20797.41
7. MT-ND1 MT-ND1 2444.68 19678.30
8. MT-CO1 MT-CO1 2170.14 17468.41
9. MT-ND3 MT-ND3 1851.86 14906.43
10. EEF1A EEF1A 1645.07 13241.89
11. gga-mir-3533 ENSGALG00000027736 1414.30 11384.32 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
12. GAPDH ENSGALG00000014442 1210.34 9742.56 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
13. PPIA ENSGALG00000028600 935.10 7527.03 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
14. NME2 ENSGALG00000002932 810.19 6521.57 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
15. RPL5 ENSGALG00000005922 750.91 6044.40 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
16. RPS23 ENSGALG00000015617 532.13 4283.35 ribosomal protein S23
17. RPS3 ENSGALG00000017330 523.66 4215.17 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
18. RPS4 RPS4 494.72 3982.22
19. RPL8 ENSGALG00000016232 493.31 3970.87 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
20. EIF4G2 ENSGALG00000005587 490.49 3948.17 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
21. RPL26 RPL26 446.03 3590.29
22. RPL7A ENSGALG00000003197 443.20 3567.51 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
23. RPL7 ENSGALG00000035252 434.73 3499.33 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
24. RPL23 ENSGALG00000001634 425.56 3425.52 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
25. RPL15 ENSGALG00000011290 424.85 3419.80 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
26. CIRBP ENSGALG00000030918 412.15 3317.58 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
27. RPS10 ENSGALG00000002813 391.68 3152.80 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
28. RPS7 ENSGALG00000016392 390.27 3141.45 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
29. ENO1 ENSGALG00000002377 389.57 3135.82 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
30. RPL31 ENSGALG00000016775 386.74 3113.04 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
31. MT-ND2 MT-ND2 376.16 3027.88
32. RPL27A ENSGALG00000005948 371.22 2988.11 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
33. RPL18A 352.16 2834.69 ribosomal protein L18a
34. MDK ENSGALG00000008367 349.34 2811.99 midkine [Source:NCBI gene;Acc:423196]
35. RPS12 ENSGALG00000013990 346.52 2789.29 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
36. RPS16 ENSGALG00000026490 335.93 2704.05 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
37. STMN1 ENSGALG00000001475 335.93 2704.05 stathmin 1 [Source:NCBI gene;Acc:396057]
38. RPS27A ENSGALG00000036790 334.52 2692.70 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
39. ATP6V0C ENSGALG00000009229 332.40 2675.63 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
40. RAN ENSGALG00000002569 331.70 2670.00 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
41. RPS15 ENSGALG00000015195 315.46 2539.28 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
42. RPS11 ENSGALG00000017299 312.64 2516.58 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
43. RPL27 ENSGALG00000002837 301.35 2425.70 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
44. RPL36 ENSGALG00000000474 299.23 2408.63 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
45. RPS24 ENSGALG00000004871 297.12 2391.65 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
46. TMSB4X ENSGALG00000026383 297.12 2391.65 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
47. LDHB ENSGALG00000035836 293.59 2363.23 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
48. RPS20 ENSGALG00000014432 290.06 2334.82 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
49. EEF1B2 ENSGALG00000008590 289.35 2329.10 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
50. RPS29 ENSGALG00000012229 288.65 2323.47 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
51. H3-IX H3-IX 281.59 2266.64
52. RPS6 ENSGALG00000015082 279.47 2249.58 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
53. RPS15A ENSGALG00000006771 275.94 2221.16 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
54. FKBP4 ENSGALG00000014331 275.24 2215.53 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
55. RPL21 ENSGALG00000027035 275.24 2215.53 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
56. SLC25A6_1 ENSGALG00000016691 274.53 2209.81 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
57. RPL32 ENSGALG00000027142 273.12 2198.46 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
58. ENSGALG00000028992 ENSGALG00000028992 267.47 2152.98
59. SNRPG ENSGALG00000028409 259.71 2090.52 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
60. RPL14 ENSGALG00000043379 254.77 2050.76 ribosomal protein L14
61. RPL23A ENSGALG00000003966 251.24 2022.34 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
62. ATP5G3 249.13 2005.36 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
63. RPSA 249.13 2005.36 ribosomal protein SA
64. RPL29 ENSGALG00000026978 246.30 1982.58 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
65. RPL13 ENSGALG00000006179 234.30 1885.98 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
66. RPL6 ENSGALG00000004818 234.30 1885.98 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
67. RPL35A ENSGALG00000007611, ENSGALG00000041230 227.95 1834.87 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
68. RPL4 ENSGALG00000007711 227.95 1834.87 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
69. RPL38 ENSGALG00000001465 224.42 1806.45 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
70. H2AFZ ENSGALG00000014023 219.48 1766.69 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
71. NDUFB9 ENSGALG00000042242 218.78 1761.06 NADH:ubiquinone oxidoreductase subunit B9 [Source:HGNC Symbol;Acc:HGNC:7704]
72. RPS14 ENSGALG00000004588 218.07 1755.34 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
73. ENSGALG00000018384 ENSGALG00000018384 216.66 1743.99
74. RPL37A ENSGALG00000011472 210.31 1692.88 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
75. RPS21 ENSGALG00000005338 207.49 1670.18 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
76. CRHOA CRHOA 202.55 1630.41
77. CNN3 ENSGALG00000005597 201.84 1624.70 Gallus gallus calponin 3 (CNN3), mRNA. [Source:RefSeq mRNA;Acc:NM_001354671]
78. BTF3L4 ENSGALG00000010570 196.20 1579.30 basic transcription factor 3 like 4 [Source:NCBI gene;Acc:424638]
79. EIF1 ENSGALG00000028517 196.20 1579.30 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
80. HNRNPA3 ENSGALG00000009250 194.78 1567.87 heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:HGNC:24941]
81. HMGB2 ENSGALG00000010745 194.08 1562.23 high mobility group box 2 [Source:NCBI gene;Acc:396482]
82. HMGN5 ENSGALG00000007131 193.37 1556.52 high mobility group nucleosome binding domain 5, transcript variant X1
83. RPLP1 ENSGALG00000030878 191.96 1545.17 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
84. MIF ENSGALG00000006326 190.55 1533.82 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
85. TPT1 ENSGALG00000028872 190.55 1533.82 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
86. RPL10A ENSGALG00000002644 187.73 1511.12 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
87. EIF3F ENSGALG00000005326 184.20 1482.71 eukaryotic translation initiation factor 3 subunit F
88. HNRNPDL ENSGALG00000023199 183.49 1476.99 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
89. RPL37 ENSGALG00000014833 180.67 1454.29 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
90. ENSGALG00000018386 ENSGALG00000018386 176.43 1420.16
91. SNRPE ENSGALG00000000137 175.73 1414.53 small nuclear ribonucleoprotein polypeptide E [Source:NCBI gene;Acc:396180]
92. ENSGALG00000002696 ENSGALG00000002696 175.02 1408.81
93. KRT19 ENSGALG00000019719 174.32 1403.18 keratin 19 [Source:NCBI gene;Acc:395861]
94. ERH ENSGALG00000017384 170.79 1374.76 ERH, mRNA splicing and mitosis factor [Source:NCBI gene;Acc:423262]
95. HSPE1 ENSGALG00000009070 170.79 1374.76 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
96. RPL24 ENSGALG00000015339 164.44 1323.65 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
97. RPL35 ENSGALG00000035677 164.44 1323.65 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
98. RPS3A ENSGALG00000010077 163.73 1317.93 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
99. RPL12 ENSGALG00000008806 162.32 1306.58 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
100. TCEB3 ENSGALG00000034625 162.32 1306.58 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA