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Experiment Chicken_E3_posterior_slice_2, section s57.

Sample reads: 124,245. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3595.87 28943.20
2. MT-ATP6 MT-ATP6 3287.10 26457.91
3. MT-ND5 MT-ND5 2711.38 21823.93
4. EEF1A EEF1A 2126.00 17112.20
5. MT-CYB MT-CYB 1871.91 15067.02
6. MT-ND4 MT-ND4 1704.66 13720.83
7. MT-ND3 MT-ND3 1611.39 12970.10
8. GAPDH ENSGALG00000014442 1540.63 12400.55 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
9. gga-mir-3527 gga-mir-3527 1360.51 10950.76
10. NME2 ENSGALG00000002932 1096.77 8827.91 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
11. gga-mir-3533 ENSGALG00000027736 1083.91 8724.40 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
12. MT-ND1 MT-ND1 1077.48 8672.65
13. PPIA ENSGALG00000028600 1074.26 8646.73 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
14. RPS23 ENSGALG00000015617 829.82 6679.23 ribosomal protein S23
15. RPS6 ENSGALG00000015082 733.33 5902.58 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
16. MDK ENSGALG00000008367 678.65 5462.46 midkine [Source:NCBI gene;Acc:423196]
17. CRABP-I ENSGALG00000003193 572.51 4608.14 cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
18. MT-CO1 MT-CO1 572.51 4608.14
19. RPL8 ENSGALG00000016232 569.29 4582.22 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
20. EIF4G2 ENSGALG00000005587 566.08 4556.38 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
21. RPL5 ENSGALG00000005922 559.64 4504.55 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
22. RPL26 RPL26 533.91 4297.45
23. RPS7 ENSGALG00000016392 530.70 4271.61 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
24. RPL23 ENSGALG00000001634 504.97 4064.51 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
25. ENSGALG00000002696 ENSGALG00000002696 501.75 4038.59
26. RPL7A ENSGALG00000003197 479.24 3857.41 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
27. RPL15 ENSGALG00000011290 459.94 3702.06 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
28. STMN1 ENSGALG00000001475 443.86 3572.63 stathmin 1 [Source:NCBI gene;Acc:396057]
29. ENO1 ENSGALG00000002377 434.21 3494.96 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
30. TMSB4X ENSGALG00000026383 434.21 3494.96 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
31. LDHB ENSGALG00000035836 418.12 3365.45 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
32. RAN ENSGALG00000002569 418.12 3365.45 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
33. RPL27A ENSGALG00000005948 408.48 3287.86 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
34. CIRBP ENSGALG00000030918 402.04 3236.02 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
35. RPL18A 398.83 3210.19 ribosomal protein L18a
36. RPL31 ENSGALG00000016775 385.96 3106.60 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
37. RPL7 ENSGALG00000035252 385.96 3106.60 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
38. FKBP4 ENSGALG00000014331 373.10 3003.09 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
39. RPS20 ENSGALG00000014432 353.80 2847.74 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
40. ATP5G3 344.15 2770.07 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
41. RPS10 ENSGALG00000002813 344.15 2770.07 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
42. RPS12 ENSGALG00000013990 337.72 2718.31 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
43. RPL14 ENSGALG00000043379 331.28 2666.48 ribosomal protein L14
44. RPL35A ENSGALG00000007611, ENSGALG00000041230 331.28 2666.48 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
45. ENSGALG00000018384 ENSGALG00000018384 324.85 2614.72
46. RPS4 RPS4 324.85 2614.72
47. RPS3 ENSGALG00000017330 315.20 2537.05 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
48. SNRPG ENSGALG00000028409 305.55 2459.38 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
49. RPS16 ENSGALG00000026490 299.12 2407.62 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
50. KPNA2 ENSGALG00000003584 295.90 2381.70 karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
51. RPL27 ENSGALG00000002837 295.90 2381.70 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
52. ATP6V0C ENSGALG00000009229 292.69 2355.87 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
53. H2AFZ ENSGALG00000014023 292.69 2355.87 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
54. RPS27A ENSGALG00000036790 292.69 2355.87 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
55. TCF12 ENSGALG00000004304 292.69 2355.87 transcription factor 12 [Source:NCBI gene;Acc:396334]
56. EEF1B2 ENSGALG00000008590 289.47 2329.95 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
57. RPL36 ENSGALG00000000474 286.25 2304.03 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
58. SLC25A6_1 ENSGALG00000016691 283.04 2278.19 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
59. RPL37 ENSGALG00000014833 279.82 2252.27 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
60. RPS29 ENSGALG00000012229 279.82 2252.27 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
61. RPS24 ENSGALG00000004871 273.39 2200.52 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
62. RPS8 ENSGALG00000010124 273.39 2200.52 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
63. ENSGALG00000028992 ENSGALG00000028992 270.17 2174.60
64. RPLP1 ENSGALG00000030878 270.17 2174.60 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
65. RPS14 ENSGALG00000004588 270.17 2174.60 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
66. H3-IX H3-IX 266.96 2148.76
67. MT-ND2 MT-ND2 266.96 2148.76
68. HMGN5 ENSGALG00000007131 263.74 2122.85 high mobility group nucleosome binding domain 5, transcript variant X1
69. EIF1 ENSGALG00000028517 257.31 2071.09 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
70. RPL6 ENSGALG00000004818 254.09 2045.17 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
71. RPS11 ENSGALG00000017299 250.87 2019.26 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
72. TXN ENSGALG00000015704 247.66 1993.42 thioredoxin [Source:NCBI gene;Acc:396437]
73. ATP6V1G1 ENSGALG00000007190 244.44 1967.50 ATPase H+ transporting V1 subunit G1 [Source:NCBI gene;Acc:417249]
74. NDUFB9 ENSGALG00000042242 244.44 1967.50 NADH:ubiquinone oxidoreductase subunit B9 [Source:HGNC Symbol;Acc:HGNC:7704]
75. RPL13 ENSGALG00000006179 244.44 1967.50 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
76. RPL21 ENSGALG00000027035 244.44 1967.50 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
77. RPS15A ENSGALG00000006771 244.44 1967.50 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
78. BTF3L4 ENSGALG00000010570 238.01 1915.75 basic transcription factor 3 like 4 [Source:NCBI gene;Acc:424638]
79. HSPA8 ENSGALG00000006512 234.79 1889.83 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
80. MIF ENSGALG00000006326 228.36 1838.07 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
81. RPL29 ENSGALG00000026978 228.36 1838.07 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
82. RPL38 ENSGALG00000001465 228.36 1838.07 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
83. RPSA 221.93 1786.32 ribosomal protein SA
84. YWHAZ ENSGALG00000031387 221.93 1786.32 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
85. RPL23A ENSGALG00000003966 218.71 1760.40 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
86. RPS21 ENSGALG00000005338 218.71 1760.40 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
87. IGF2BP3 ENSGALG00000010961 212.28 1708.64 insulin like growth factor 2 mRNA binding protein 3 [Source:NCBI gene;Acc:420617]
88. RPL32 ENSGALG00000027142 212.28 1708.64 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
89. EIF4A2 ENSGALG00000008684 209.06 1682.73 eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
90. RPS15 ENSGALG00000015195 209.06 1682.73 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
91. RPL10A ENSGALG00000002644 205.85 1656.89 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
92. EIF4A3 ENSGALG00000008530 202.63 1630.97 eukaryotic translation initiation factor 4A3 [Source:NCBI gene;Acc:416704]
93. MEIS2 ENSGALG00000039118 202.63 1630.97 Meis homeobox 2 [Source:NCBI gene;Acc:395588]
94. PGK1 ENSGALG00000007936 202.63 1630.97 phosphoglycerate kinase 1 [Source:NCBI gene;Acc:395833]
95. SNRPE ENSGALG00000000137 199.41 1605.05 small nuclear ribonucleoprotein polypeptide E [Source:NCBI gene;Acc:396180]
96. TPT1 ENSGALG00000028872 199.41 1605.05 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
97. HSPE1 ENSGALG00000009070 192.98 1553.30 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
98. RPLP2 ENSGALG00000034811 192.98 1553.30 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
99. CNN3 ENSGALG00000005597 189.76 1527.38 Gallus gallus calponin 3 (CNN3), mRNA. [Source:RefSeq mRNA;Acc:NM_001354671]
100. ANP32B ENSGALG00000037483 186.55 1501.54 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA