Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Chicken_E3_posterior_slice_2, section s39.

Sample reads: 124,237. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4245.85 34177.21
2. MT-ATP6 MT-ATP6 4003.42 32225.75
3. MT-ND5 MT-ND5 3206.15 25808.08
4. EEF1A EEF1A 2082.65 16764.41
5. MT-CYB MT-CYB 2007.81 16161.98
6. GAPDH ENSGALG00000014442 1594.53 12835.26 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
7. gga-mir-3527 gga-mir-3527 1364.30 10982.01
8. MT-ND4 MT-ND4 1304.10 10497.43
9. gga-mir-3533 ENSGALG00000027736 1291.08 10392.62 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
10. PPIA ENSGALG00000028600 1264.24 10176.57 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
11. MT-ND1 MT-ND1 924.99 7445.76
12. NME2 ENSGALG00000002932 861.54 6935.01 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
13. MT-CO1 MT-CO1 747.64 6018.17
14. MT-ND3 MT-ND3 734.62 5913.37
15. RPS23 ENSGALG00000015617 701.27 5644.91 ribosomal protein S23
16. RPS6 ENSGALG00000015082 656.52 5284.69 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
17. TMSB4X ENSGALG00000026383 649.20 5225.77 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
18. ENO1 ENSGALG00000002377 544.26 4381.05 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
19. EIF4G2 ENSGALG00000005587 533.68 4295.89 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
20. RPL15 ENSGALG00000011290 532.05 4282.77 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
21. RPS7 ENSGALG00000016392 510.09 4106.00 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
22. RPL8 ENSGALG00000016232 503.58 4053.60 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
23. RPL18A 499.51 4020.83 ribosomal protein L18a
24. ENSGALG00000002696 ENSGALG00000002696 460.46 3706.50
25. STMN1 ENSGALG00000001475 447.45 3601.77 stathmin 1 [Source:NCBI gene;Acc:396057]
26. RPL7A ENSGALG00000003197 425.48 3424.93 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
27. RPL5 ENSGALG00000005922 410.02 3300.48 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
28. RPL26 RPL26 388.06 3123.71
29. RPL23 ENSGALG00000001634 382.36 3077.83 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
30. RPL7 ENSGALG00000035252 365.28 2940.34 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
31. RPL27A ENSGALG00000005948 359.58 2894.46 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
32. CIRBP ENSGALG00000030918 353.89 2848.66 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
33. MDK ENSGALG00000008367 352.26 2835.54 midkine [Source:NCBI gene;Acc:423196]
34. RPL31 ENSGALG00000016775 349.01 2809.38 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
35. RAN ENSGALG00000002569 340.87 2743.85 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
36. RPS4 RPS4 330.30 2658.77
37. RPS16 ENSGALG00000026490 329.48 2652.17 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
38. ATP6V0C ENSGALG00000009229 325.41 2619.41 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
39. RPS12 ENSGALG00000013990 322.97 2599.77 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
40. H3-IX H3-IX 316.47 2547.44
41. RPS11 ENSGALG00000017299 311.58 2508.08 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
42. RPS10 ENSGALG00000002813 303.45 2442.64 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
43. RPL36 ENSGALG00000000474 292.87 2357.47 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
44. SLC25A6_1 ENSGALG00000016691 283.11 2278.91 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
45. KPNA2 ENSGALG00000003584 282.30 2272.39 karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
46. H2AFZ ENSGALG00000014023 281.48 2265.79 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
47. ATP5G3 279.86 2252.75 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
48. HBG1 HBG1 272.53 2193.75
49. EEF1B2 ENSGALG00000008590 269.28 2167.58 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
50. RPS20 ENSGALG00000014432 268.47 2161.06 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
51. RPL27 ENSGALG00000002837 265.21 2134.82 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
52. IGF2BP3 ENSGALG00000010961 261.96 2108.66 insulin like growth factor 2 mRNA binding protein 3 [Source:NCBI gene;Acc:420617]
53. RPS27A ENSGALG00000036790 257.89 2075.90 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
54. RPS8 ENSGALG00000010124 256.26 2062.78 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
55. RPLP1 ENSGALG00000030878 250.57 2016.98 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
56. RPL21 ENSGALG00000027035 248.94 2003.86 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
57. RPS3 ENSGALG00000017330 248.94 2003.86 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
58. FKBP4 ENSGALG00000014331 248.13 1997.34 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
59. RPL14 ENSGALG00000043379 247.32 1990.82 ribosomal protein L14
60. HMGN5 ENSGALG00000007131 242.43 1951.45 high mobility group nucleosome binding domain 5, transcript variant X1
61. RPL35A ENSGALG00000007611, ENSGALG00000041230 241.62 1944.93 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
62. LDHB ENSGALG00000035836 239.99 1931.81 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
63. MT-ND2 MT-ND2 237.55 1912.17
64. ENSGALG00000028992 ENSGALG00000028992 235.93 1899.13
65. RPSA 235.93 1899.13 ribosomal protein SA
66. TXN ENSGALG00000015704 232.67 1872.89 thioredoxin [Source:NCBI gene;Acc:396437]
67. CRHOA CRHOA 226.16 1820.49
68. RPS14 ENSGALG00000004588 222.91 1794.33 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
69. HNRNPA3 ENSGALG00000009250 221.28 1781.21 heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:HGNC:24941]
70. RPL37 ENSGALG00000014833 221.28 1781.21 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
71. RPL32 ENSGALG00000027142 219.65 1768.09 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
72. ENSGALG00000018384 ENSGALG00000018384 218.84 1761.56
73. RPS29 ENSGALG00000012229 217.21 1748.44 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
74. NDUFB9 ENSGALG00000042242 216.40 1741.92 NADH:ubiquinone oxidoreductase subunit B9 [Source:HGNC Symbol;Acc:HGNC:7704]
75. RPL38 ENSGALG00000001465 216.40 1741.92 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
76. RPS24 ENSGALG00000004871 212.33 1709.16 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
77. ENSGALG00000028649 ENSGALG00000028649 209.89 1689.52
78. SNRPG ENSGALG00000028409 206.64 1663.36 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
79. MIF ENSGALG00000006326 203.38 1637.12 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
80. RPS15A ENSGALG00000006771 202.57 1630.60 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
81. ANP32B ENSGALG00000037483 200.94 1617.48 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
82. HNRNPDL ENSGALG00000023199 197.69 1591.32 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
83. HSPA8 ENSGALG00000006512 196.88 1584.80 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
84. EIF1 ENSGALG00000028517 196.06 1578.20 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
85. HBZ ENSGALG00000023740 196.06 1578.20 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
86. HBE 193.62 1558.56 hemoglobin subunit epsilon
87. RPL23A ENSGALG00000003966 192.81 1552.03 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
88. HMGB1 ENSGALG00000042875 186.30 1499.63 high mobility group box 1 [Source:NCBI gene;Acc:395724]
89. EIF5A2 ENSGALG00000009309 185.49 1493.11 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
90. BTF3L4 ENSGALG00000010570 184.67 1486.51 basic transcription factor 3 like 4 [Source:NCBI gene;Acc:424638]
91. CCT6 CCT6 184.67 1486.51
92. TPT1 ENSGALG00000028872 184.67 1486.51 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
93. RPL4 ENSGALG00000007711 183.86 1479.99 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
94. SNRPE ENSGALG00000000137 183.05 1473.47 small nuclear ribonucleoprotein polypeptide E [Source:NCBI gene;Acc:396180]
95. HMGN2 HMGN2 176.54 1421.07
96. GNB2L1 ENSGALG00000000122 173.28 1394.83 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
97. RPL10A ENSGALG00000002644 173.28 1394.83 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
98. ACTG1 ENSGALG00000001381 172.47 1388.31 Actin, gamma 1 [Source:NCBI gene;Acc:415296]
99. RPLP2 ENSGALG00000034811 172.47 1388.31 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
100. RPS21 ENSGALG00000005338 172.47 1388.31 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA