Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Chicken_E3_posterior_slice_2, section s26.

Sample reads: 124,239. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 4052.23 32616.99
2. MT-ND5 MT-ND5 3621.29 29148.29
3. MT-CO3 MT-CO3 3512.07 28269.17
4. GAPDH ENSGALG00000014442 1999.80 16096.68 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
5. MT-CYB MT-CYB 1915.40 15417.34
6. EEF1A EEF1A 1890.58 15217.56
7. PPIA ENSGALG00000028600 1415.95 11397.19 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
8. MT-ND1 MT-ND1 1361.33 10957.55
9. MT-ND4 MT-ND4 1309.70 10541.97
10. gga-mir-3533 ENSGALG00000027736 1291.83 10398.13 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
11. gga-mir-3527 gga-mir-3527 1272.96 10246.24
12. MT-CO1 MT-CO1 845.99 6809.50
13. NME2 ENSGALG00000002932 774.50 6234.06 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
14. RPS23 ENSGALG00000015617 767.55 6178.12 ribosomal protein S23
15. TMSB4X ENSGALG00000026383 650.38 5235.00 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
16. MT-ND3 MT-ND3 613.64 4939.28
17. ENO1 ENSGALG00000002377 611.66 4923.34 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
18. RPS6 ENSGALG00000015082 597.76 4811.46 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
19. EIF4G2 ENSGALG00000005587 575.91 4635.58 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
20. RPL15 ENSGALG00000011290 490.52 3948.27 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
21. STMN1 ENSGALG00000001475 478.60 3852.32 stathmin 1 [Source:NCBI gene;Acc:396057]
22. RPS7 ENSGALG00000016392 473.64 3812.40 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
23. RPL8 ENSGALG00000016232 442.86 3564.65 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
24. CIRBP ENSGALG00000030918 440.87 3548.63 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
25. MDK ENSGALG00000008367 433.92 3492.69 midkine [Source:NCBI gene;Acc:423196]
26. LDHB ENSGALG00000035836 425.98 3428.78 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
27. ENSGALG00000002696 ENSGALG00000002696 423.00 3404.79
28. RPL5 ENSGALG00000005922 419.03 3372.83 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
29. RPL7 ENSGALG00000035252 406.12 3268.92 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
30. RPS27A ENSGALG00000036790 403.14 3244.93 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
31. RPL7A ENSGALG00000003197 385.26 3101.01 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
32. RPL18A 380.30 3061.09 ribosomal protein L18a
33. RPL26 RPL26 367.39 2957.18
34. RPL27A ENSGALG00000005948 367.39 2957.18 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
35. ENSGALG00000018384 ENSGALG00000018384 355.48 2861.31
36. MT-ND2 MT-ND2 349.52 2813.34
37. RAN ENSGALG00000002569 338.60 2725.44 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
38. RPS4 RPS4 330.65 2661.45
39. H2AFZ ENSGALG00000014023 329.66 2653.48 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
40. RPS16 ENSGALG00000026490 321.72 2589.57 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
41. ATP6V0C ENSGALG00000009229 313.77 2525.58 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
42. EIF1 ENSGALG00000028517 313.77 2525.58 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
43. RPL31 ENSGALG00000016775 313.77 2525.58 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
44. RPS3 ENSGALG00000017330 304.84 2453.70 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
45. EIF5A2 ENSGALG00000009309 302.85 2437.68 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
46. HMGN5 ENSGALG00000007131 300.86 2421.67 high mobility group nucleosome binding domain 5, transcript variant X1
47. FKBP4 ENSGALG00000014331 295.90 2381.74 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
48. RPS15 ENSGALG00000015195 282.00 2269.86 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
49. RPL23 ENSGALG00000001634 280.01 2253.84 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
50. SNRPG ENSGALG00000028409 280.01 2253.84 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
51. MIF ENSGALG00000006326 278.03 2237.90 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
52. RPS12 ENSGALG00000013990 276.04 2221.89 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
53. RPL14 ENSGALG00000043379 272.07 2189.93 ribosomal protein L14
54. RPL27 ENSGALG00000002837 270.08 2173.91 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
55. ANP32B ENSGALG00000037483 267.10 2149.93 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
56. RPS10 ENSGALG00000002813 260.15 2093.99 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
57. HMGN2 HMGN2 257.17 2070.00
58. ATP5G3 252.21 2030.08 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
59. RPS11 ENSGALG00000017299 252.21 2030.08 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
60. RPL21 ENSGALG00000027035 244.27 1966.17 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
61. RPL36 ENSGALG00000000474 244.27 1966.17 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
62. RPL37 ENSGALG00000014833 244.27 1966.17 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
63. HNRNPDL ENSGALG00000023199 243.27 1958.12 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
64. KPNA2 ENSGALG00000003584 241.29 1942.18 karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
65. SNRPE ENSGALG00000000137 241.29 1942.18 small nuclear ribonucleoprotein polypeptide E [Source:NCBI gene;Acc:396180]
66. RPS24 ENSGALG00000004871 240.29 1934.13 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
67. SLC25A6_1 ENSGALG00000016691 239.30 1926.16 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
68. H3-IX H3-IX 238.31 1918.19
69. RPS20 ENSGALG00000014432 238.31 1918.19 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
70. RPS29 ENSGALG00000012229 238.31 1918.19 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
71. NONO ENSGALG00000005507 235.33 1894.21 non-POU domain containing octamer binding [Source:NCBI gene;Acc:428701]
72. RPLP1 ENSGALG00000030878 230.36 1854.20 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
73. RPL38 ENSGALG00000001465 226.39 1822.25 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
74. EEF1B2 ENSGALG00000008590 225.40 1814.28 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
75. RPL3 ENSGALG00000012172 221.43 1782.32 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
76. RPL32 ENSGALG00000027142 221.43 1782.32 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
77. RPS8 ENSGALG00000010124 221.43 1782.32 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
78. PGK1 ENSGALG00000007936 215.47 1734.35 phosphoglycerate kinase 1 [Source:NCBI gene;Acc:395833]
79. RPL13 ENSGALG00000006179 215.47 1734.35 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
80. IGF2BP3 ENSGALG00000010961 214.48 1726.38 insulin like growth factor 2 mRNA binding protein 3 [Source:NCBI gene;Acc:420617]
81. HMGB2 ENSGALG00000010745 212.49 1710.36 high mobility group box 2 [Source:NCBI gene;Acc:396482]
82. TCF12 ENSGALG00000004304 210.51 1694.43 transcription factor 12 [Source:NCBI gene;Acc:396334]
83. RPSA 207.53 1670.44 ribosomal protein SA
84. RPS14 ENSGALG00000004588 203.55 1638.40 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
85. CRABP-I ENSGALG00000003193 199.58 1606.45 cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
86. RPS15A ENSGALG00000006771 198.59 1598.48 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
87. ENSGALG00000028992 ENSGALG00000028992 197.60 1590.51
88. CRHOA CRHOA 192.63 1550.51
89. TPT1 ENSGALG00000028872 192.63 1550.51 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
90. RPL10A ENSGALG00000002644 183.70 1478.63 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
91. TXN ENSGALG00000015704 181.71 1462.61 thioredoxin [Source:NCBI gene;Acc:396437]
92. BTF3L4 ENSGALG00000010570 179.72 1446.59 basic transcription factor 3 like 4 [Source:NCBI gene;Acc:424638]
93. HNRNPA3 ENSGALG00000009250 179.72 1446.59 heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:HGNC:24941]
94. CCT6 CCT6 177.74 1430.66
95. RPL4 ENSGALG00000007711 177.74 1430.66 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
96. ENSGALG00000018386 ENSGALG00000018386 176.75 1422.69
97. HSPE1 ENSGALG00000009070 175.75 1414.64 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
98. EIF3F ENSGALG00000005326 174.76 1406.67 eukaryotic translation initiation factor 3 subunit F
99. RPLP2 ENSGALG00000034811 174.76 1406.67 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
100. RPL23A ENSGALG00000003966 172.77 1390.65 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA