Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Chicken_E3_embryo, section s88.

Sample reads: 113,433. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3847.30 33917.87
2. EEF1A EEF1A 1176.76 10374.34
3. CIRBP ENSGALG00000030918 978.71 8628.33 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
4. gga-mir-3533 ENSGALG00000027736 941.10 8296.76 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
5. MT-ATP6 MT-ATP6 874.32 7708.02
6. RPL35A ENSGALG00000007611, ENSGALG00000041230 868.94 7660.59 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
7. RPLP0 ENSGALG00000023294 865.11 7626.83 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
8. GAPDH ENSGALG00000014442 850.52 7498.20 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
9. MT-ND5 MT-ND5 832.10 7335.81
10. MDK ENSGALG00000008367 765.32 6747.08 midkine [Source:NCBI gene;Acc:423196]
11. RPS10 ENSGALG00000002813 750.73 6618.45 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
12. RPLP1 ENSGALG00000030878 748.43 6598.17 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
13. RPL23A ENSGALG00000003966 740.75 6530.47 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
14. RPL15 ENSGALG00000011290 704.67 6212.38 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
15. RPL4 ENSGALG00000007711 681.64 6009.35 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
16. SNRPD1 ENSGALG00000041334 597.97 5271.72 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
17. RPS21 ENSGALG00000005338 518.91 4574.72 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
18. RPS23 ENSGALG00000015617 515.07 4540.87 ribosomal protein S23
19. RPL19 ENSGALG00000001658 498.95 4398.75 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
20. RPL13 ENSGALG00000006179 488.21 4304.07 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
21. RPL7A ENSGALG00000003197 480.53 4236.36 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
22. RPL27A ENSGALG00000005948 474.39 4182.23 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
23. RPL35 ENSGALG00000035677 461.34 4067.18 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
24. RPS15A ENSGALG00000006771 460.57 4060.39 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
25. RPL26 RPL26 459.80 4053.61
26. PPIA ENSGALG00000028600 449.06 3958.92 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
27. MT-ND4 MT-ND4 445.22 3925.07
28. RPS8 ENSGALG00000010124 443.68 3911.49 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
29. RPSA 442.15 3898.00 ribosomal protein SA
30. RPL38 ENSGALG00000001465 438.31 3864.15 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
31. RPL8 ENSGALG00000016232 436.01 3843.87 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
32. RPL29 ENSGALG00000026978 435.24 3837.08 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
33. RPS15 ENSGALG00000015195 432.17 3810.02 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
34. HMGN5 ENSGALG00000007131 418.35 3688.18 high mobility group nucleosome binding domain 5, transcript variant X1
35. RPL27 ENSGALG00000002837 416.82 3674.69 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
36. RPS12 ENSGALG00000013990 416.82 3674.69 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
37. GNB2L1 ENSGALG00000000122 408.37 3600.20 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
38. RPS29 ENSGALG00000012229 405.30 3573.13 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
39. RPS2 ENSGALG00000005490 398.39 3512.21 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
40. RPS6 ENSGALG00000015082 397.63 3505.51 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
41. MT-CYB MT-CYB 396.09 3491.94
42. RPL36 ENSGALG00000000474 385.34 3397.16 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
43. RPS3A ENSGALG00000010077 383.81 3383.68 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
44. RPL12 ENSGALG00000008806 370.76 3268.63 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
45. RPS27A ENSGALG00000036790 362.32 3194.22 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
46. gga-mir-3527 gga-mir-3527 358.48 3160.37
47. RPS11 ENSGALG00000017299 356.94 3146.79 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
48. NME2 ENSGALG00000002932 353.87 3119.72 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
49. RPL21 ENSGALG00000027035 348.50 3072.38 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
50. RPL32 ENSGALG00000027142 348.50 3072.38 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
51. MT-CO1 MT-CO1 347.73 3065.59
52. RPS4 RPS4 341.59 3011.46
53. RPS16 ENSGALG00000026490 336.98 2970.82 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
54. RPL37 ENSGALG00000014833 336.22 2964.12 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
55. ANP32B ENSGALG00000037483 332.38 2930.27 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
56. PHB2 ENSGALG00000014567 331.61 2923.48 prohibitin 2 [Source:NCBI gene;Acc:771124]
57. TXN ENSGALG00000015704 330.84 2916.69 thioredoxin [Source:NCBI gene;Acc:396437]
58. RPL24 ENSGALG00000015339 307.81 2713.66 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
59. RPS28 ENSGALG00000024398 307.81 2713.66 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
60. SET ENSGALG00000004701 304.74 2686.59 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
61. ENO1 ENSGALG00000002377 285.55 2517.41 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
62. RPL14 ENSGALG00000043379 284.79 2510.71 ribosomal protein L14
63. RPS14 ENSGALG00000004588 282.48 2490.35 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
64. ENSGALG00000028649 ENSGALG00000028649 278.65 2456.58
65. RPS7 ENSGALG00000016392 277.88 2449.80 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
66. ALDOC ENSGALG00000026077 274.04 2415.94 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
67. RPL37A ENSGALG00000011472 274.04 2415.94 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
68. RPL23 ENSGALG00000001634 264.83 2334.75 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
69. RPL6 ENSGALG00000004818 260.22 2294.10 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
70. RPL18A 259.45 2287.32 ribosomal protein L18a
71. TCEB3 ENSGALG00000034625 259.45 2287.32 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
72. EIF5A2 ENSGALG00000009309 248.71 2192.63 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
73. MT-ND3 MT-ND3 245.64 2165.57
74. RPL36AL ENSGALG00000004952 244.10 2151.99 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
75. RPL7 ENSGALG00000035252 241.80 2131.71 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
76. RPS20 ENSGALG00000014432 235.66 2077.58 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
77. RPS25 ENSGALG00000007699 232.59 2050.52 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
78. STMN1 ENSGALG00000001475 231.05 2036.94 stathmin 1 [Source:NCBI gene;Acc:396057]
79. ENSGALG00000002696 ENSGALG00000002696 229.52 2023.45
80. AKAP12 ENSGALG00000036240 227.21 2003.09 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
81. RPLP2 ENSGALG00000034811 219.54 1935.47 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
82. RPS13 ENSGALG00000006096 219.54 1935.47 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
83. H3-IX H3-IX 218.77 1928.68
84. RAN ENSGALG00000002569 218.77 1928.68 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
85. ATP5G3 218.00 1921.89 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
86. MT-ND1 MT-ND1 210.33 1854.27
87. PRDX1 ENSGALG00000010243 210.33 1854.27 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
88. UBB ENSGALG00000004509 209.56 1847.48 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
89. ENSGALG00000018384 ENSGALG00000018384 207.26 1827.21
90. ENSGALG00000028992 ENSGALG00000028992 205.72 1813.63
91. CRHOA CRHOA 199.58 1759.50
92. HSPA8 ENSGALG00000006512 199.58 1759.50 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
93. RPL10A ENSGALG00000002644 199.58 1759.50 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
94. RPL31 ENSGALG00000016775 198.81 1752.71 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
95. TMSB4X ENSGALG00000026383 198.81 1752.71 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
96. HNRNPDL ENSGALG00000023199 196.51 1732.44 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
97. SEC61G ENSGALG00000037863 196.51 1732.44 Sec61 translocon gamma subunit [Source:NCBI gene;Acc:776639]
98. FKBP4 ENSGALG00000014331 192.67 1698.58 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
99. RPS17 ENSGALG00000002157 191.90 1691.79 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
100. EEF1D 191.14 1685.09 eukaryotic translation elongation factor 1 delta, transcript variant X13
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA