Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_embryo, section s71.

Sample reads: 113,618. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4574.15 40259.37
2. EEF1A EEF1A 1319.75 11615.78
3. CIRBP ENSGALG00000030918 1046.02 9206.54 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
4. MT-ATP6 MT-ATP6 999.10 8793.58
5. RPL35A ENSGALG00000007611, ENSGALG00000041230 889.61 7829.90 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
6. RPL23A ENSGALG00000003966 886.68 7804.11 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
7. MT-ND5 MT-ND5 869.08 7649.21
8. RPLP1 ENSGALG00000030878 765.45 6737.11 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
9. gga-mir-3533 ENSGALG00000027736 760.57 6694.16 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
10. RPS10 ENSGALG00000002813 752.75 6625.33 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
11. GAPDH ENSGALG00000014442 733.19 6453.17 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
12. RPL15 ENSGALG00000011290 726.35 6392.97 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
13. RPS23 ENSGALG00000015617 685.29 6031.58 ribosomal protein S23
14. HBG1 HBG1 683.34 6014.42
15. RPL4 ENSGALG00000007711 622.73 5480.96 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
16. RPLP0 ENSGALG00000023294 613.93 5403.50 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
17. RPL13 ENSGALG00000006179 572.87 5042.11 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
18. HBZ ENSGALG00000023740 552.34 4861.42 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
19. RPL27A ENSGALG00000005948 513.24 4517.28 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
20. gga-mir-3527 gga-mir-3527 497.59 4379.54
21. MT-CYB MT-CYB 495.64 4362.37
22. SNRPD1 ENSGALG00000041334 487.82 4293.55 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
23. RPS21 ENSGALG00000005338 484.89 4267.76 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
24. RPS11 ENSGALG00000017299 483.91 4259.13 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
25. MT-ND4 MT-ND4 479.02 4216.09
26. RPS15 ENSGALG00000015195 479.02 4216.09 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
27. RPSA 475.11 4181.68 ribosomal protein SA
28. RPS29 ENSGALG00000012229 455.56 4009.61 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
29. RPL35 ENSGALG00000035677 449.69 3957.95 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
30. RPL19 ENSGALG00000001658 443.83 3906.37 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
31. RPL32 ENSGALG00000027142 437.96 3854.70 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
32. HBE 433.07 3811.66 hemoglobin subunit epsilon
33. RPL27 ENSGALG00000002837 430.14 3785.88 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
34. RPS2 ENSGALG00000005490 425.25 3742.84 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
35. RPS12 ENSGALG00000013990 424.27 3734.21 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
36. RPS15A ENSGALG00000006771 422.32 3717.05 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
37. RPS16 ENSGALG00000026490 420.36 3699.80 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
38. RPL29 ENSGALG00000026978 414.50 3648.22 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
39. HMGN5 ENSGALG00000007131 413.52 3639.60 high mobility group nucleosome binding domain 5, transcript variant X1
40. RPS8 ENSGALG00000010124 401.79 3536.35 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
41. RPL7A ENSGALG00000003197 394.95 3476.15 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
42. PPIA ENSGALG00000028600 378.33 3329.87 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
43. RPL8 ENSGALG00000016232 372.46 3278.21 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
44. RPS3A ENSGALG00000010077 368.55 3243.79 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
45. RPL26 RPL26 364.64 3209.38
46. RPL37A ENSGALG00000011472 350.96 3088.97 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
47. RPS6 ENSGALG00000015082 349.98 3080.35 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
48. MDK ENSGALG00000008367 346.07 3045.93 midkine [Source:NCBI gene;Acc:423196]
49. RPL12 ENSGALG00000008806 346.07 3045.93 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
50. RPL36 ENSGALG00000000474 346.07 3045.93 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
51. RPL21 ENSGALG00000027035 345.09 3037.31 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
52. RPS27A ENSGALG00000036790 342.16 3011.52 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
53. RPL38 ENSGALG00000001465 337.27 2968.48 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
54. MT-CO1 MT-CO1 328.47 2891.03
55. RPS4 RPS4 327.49 2882.40
56. RPL24 ENSGALG00000015339 323.58 2847.99 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
57. TXN ENSGALG00000015704 320.65 2822.20 thioredoxin [Source:NCBI gene;Acc:396437]
58. GNB2L1 ENSGALG00000000122 316.74 2787.79 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
59. RPL14 ENSGALG00000043379 313.81 2762.00 ribosomal protein L14
60. RPL37 ENSGALG00000014833 311.85 2744.75 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
61. NME2 ENSGALG00000002932 309.90 2727.58 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
62. MT-ND3 MT-ND3 296.21 2607.09
63. RPL6 ENSGALG00000004818 288.39 2538.26 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
64. ANP32B ENSGALG00000037483 282.52 2486.60 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
65. LDHB ENSGALG00000035836 282.52 2486.60 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
66. RPS14 ENSGALG00000004588 279.59 2460.81 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
67. RPS28 ENSGALG00000024398 274.70 2417.77 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
68. RPL23 ENSGALG00000001634 273.73 2409.23 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
69. RPL18A 271.77 2391.98 ribosomal protein L18a
70. TCEB3 ENSGALG00000034625 260.04 2288.74 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
71. PRDX1 ENSGALG00000010243 257.11 2262.95 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
72. TMSB4X ENSGALG00000026383 256.13 2254.33 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
73. EIF5A2 ENSGALG00000009309 252.22 2219.91 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
74. RPS17 ENSGALG00000002157 250.26 2202.66 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
75. MYH15 ENSGALG00000015358 246.35 2168.25 myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
76. ATP5G3 244.40 2151.09 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
77. ACTC1 ENSGALG00000009844 237.55 2090.80 actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
78. ALDOC ENSGALG00000026077 235.60 2073.63 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
79. EIF4G2 ENSGALG00000005587 229.73 2021.97 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
80. ENO1 ENSGALG00000002377 229.73 2021.97 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
81. RPL7 ENSGALG00000035252 228.76 2013.43 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
82. SLC25A6_1 ENSGALG00000016691 227.78 2004.81 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
83. MT-ND1 MT-ND1 226.80 1996.18
84. RPL5 ENSGALG00000005922 226.80 1996.18 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
85. RPS7 ENSGALG00000016392 224.85 1979.02 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
86. RPL31 ENSGALG00000016775 220.94 1944.60 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
87. RPL36AL ENSGALG00000004952 220.94 1944.60 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
88. EEF1D 218.00 1918.73 eukaryotic translation elongation factor 1 delta, transcript variant X13
89. PHB2 ENSGALG00000014567 217.03 1910.19 prohibitin 2 [Source:NCBI gene;Acc:771124]
90. RPS13 ENSGALG00000006096 217.03 1910.19 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
91. ENSGALG00000028649 ENSGALG00000028649 210.18 1849.90
92. RPS25 ENSGALG00000007699 210.18 1849.90 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
93. MYL3 ENSGALG00000005448 208.23 1832.74 myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
94. CRHOA CRHOA 204.32 1798.32
95. SEC61G ENSGALG00000037863 203.34 1789.70 Sec61 translocon gamma subunit [Source:NCBI gene;Acc:776639]
96. ENSGALG00000002696 ENSGALG00000002696 202.36 1781.07
97. FKBP4 ENSGALG00000014331 201.38 1772.45 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
98. STMN1 ENSGALG00000001475 201.38 1772.45 stathmin 1 [Source:NCBI gene;Acc:396057]
99. RPLP2 ENSGALG00000034811 198.45 1746.66 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
100. RPS20 ENSGALG00000014432 198.45 1746.66 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA