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Experiment Chicken_E3_embryo, section s65.

Sample reads: 113,516. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4854.45 42766.27
2. EEF1A EEF1A 1060.08 9338.99
3. CIRBP ENSGALG00000030918 1000.20 8811.47 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
4. MT-ATP6 MT-ATP6 974.08 8581.36
5. RPL35A ENSGALG00000007611, ENSGALG00000041230 973.44 8575.72 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
6. gga-mir-3533 ENSGALG00000027736 913.55 8048.11 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
7. MT-ND5 MT-ND5 875.97 7717.04
8. MDK ENSGALG00000008367 798.25 7032.35 midkine [Source:NCBI gene;Acc:423196]
9. RPL23A ENSGALG00000003966 730.72 6437.43 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
10. RPS10 ENSGALG00000002813 720.52 6347.57 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
11. RPLP0 ENSGALG00000023294 703.96 6201.68 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
12. RPLP1 ENSGALG00000030878 696.31 6134.29 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
13. RPL4 ENSGALG00000007711 690.58 6083.81 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
14. GAPDH ENSGALG00000014442 645.99 5690.98 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
15. RPL15 ENSGALG00000011290 642.80 5662.88 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
16. RPS23 ENSGALG00000015617 561.26 4944.53 ribosomal protein S23
17. RPL27A ENSGALG00000005948 544.69 4798.56 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
18. SNRPD1 ENSGALG00000041334 511.56 4506.69 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
19. RPL13 ENSGALG00000006179 505.83 4456.21 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
20. RPS15A ENSGALG00000006771 477.80 4209.28 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
21. MT-ND4 MT-ND4 476.53 4198.09
22. RPS8 ENSGALG00000010124 470.79 4147.52 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
23. RPL26 RPL26 466.97 4113.87
24. RPS21 ENSGALG00000005338 461.87 4068.94 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
25. RPL38 ENSGALG00000001465 460.60 4057.75 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
26. RPL8 ENSGALG00000016232 459.96 4052.11 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
27. RPL19 ENSGALG00000001658 459.33 4046.56 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
28. RPS6 ENSGALG00000015082 456.78 4024.10 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
29. RPL7A ENSGALG00000003197 455.50 4012.82 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
30. RPSA 433.84 3822.00 ribosomal protein SA
31. MT-CO1 MT-CO1 426.84 3760.33
32. RPS12 ENSGALG00000013990 422.38 3721.04 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
33. RPL27 ENSGALG00000002837 421.74 3715.40 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
34. RPL37 ENSGALG00000014833 419.19 3692.94 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
35. RPS3A ENSGALG00000010077 417.28 3676.11 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
36. RPL29 ENSGALG00000026978 414.09 3648.01 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
37. RPS2 ENSGALG00000005490 413.46 3642.46 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
38. PPIA ENSGALG00000028600 410.91 3620.00 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
39. RPL12 ENSGALG00000008806 405.81 3575.07 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
40. RPS29 ENSGALG00000012229 391.80 3451.64 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
41. MT-CYB MT-CYB 389.89 3434.82
42. RPS28 ENSGALG00000024398 386.70 3406.71 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
43. RPS15 ENSGALG00000015195 385.43 3395.52 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
44. RPS27A ENSGALG00000036790 382.24 3367.42 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
45. TXN ENSGALG00000015704 375.23 3305.67 thioredoxin [Source:NCBI gene;Acc:396437]
46. gga-mir-3527 gga-mir-3527 375.23 3305.67
47. RPL21 ENSGALG00000027035 373.96 3294.48 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
48. HMGN5 ENSGALG00000007131 370.77 3266.37 high mobility group nucleosome binding domain 5, transcript variant X1
49. RPL32 ENSGALG00000027142 366.95 3232.72 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
50. RPS4 RPS4 354.21 3120.49
51. NME2 ENSGALG00000002932 351.66 3098.02 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
52. RPL35 ENSGALG00000035677 350.39 3086.83 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
53. RPS11 ENSGALG00000017299 343.38 3025.08 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
54. RPL36 ENSGALG00000000474 331.27 2918.39 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
55. RPS16 ENSGALG00000026490 329.36 2901.56 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
56. ANP32B ENSGALG00000037483 328.73 2896.01 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
57. ENSGALG00000028649 ENSGALG00000028649 313.44 2761.31
58. HBG1 HBG1 312.16 2750.04
59. HBZ ENSGALG00000023740 301.33 2654.63 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
60. PHB2 ENSGALG00000014567 299.42 2637.80 prohibitin 2 [Source:NCBI gene;Acc:771124]
61. RPL23 ENSGALG00000001634 294.96 2598.51 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
62. RPL6 ENSGALG00000004818 294.96 2598.51 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
63. RPS7 ENSGALG00000016392 290.50 2559.22 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
64. RPL36AL ENSGALG00000004952 287.32 2531.20 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
65. SET ENSGALG00000004701 285.41 2514.38 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
66. LDHB ENSGALG00000035836 279.67 2463.81 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
67. RAN ENSGALG00000002569 278.40 2452.62 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
68. EIF5A2 ENSGALG00000009309 277.76 2446.98 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
69. GNB2L1 ENSGALG00000000122 275.21 2424.52 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
70. RPL37A ENSGALG00000011472 272.66 2402.05 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
71. RPL14 ENSGALG00000043379 272.03 2396.50 ribosomal protein L14
72. ENSGALG00000002696 ENSGALG00000002696 270.75 2385.23
73. ALDOC ENSGALG00000026077 268.21 2362.85 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
74. AKAP12 ENSGALG00000036240 265.66 2340.39 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
75. RPS14 ENSGALG00000004588 265.66 2340.39 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
76. CRHOA CRHOA 258.01 2272.99
77. RPL5 ENSGALG00000005922 247.82 2183.22 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
78. TMSB4X ENSGALG00000026383 244.00 2149.57 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
79. RPS20 ENSGALG00000014432 240.81 2121.46 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
80. TCEB3 ENSGALG00000034625 234.44 2065.35 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
81. SLC25A6_1 ENSGALG00000016691 230.62 2031.69 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
82. ENSGALG00000028992 ENSGALG00000028992 229.34 2020.42
83. RPLP2 ENSGALG00000034811 228.71 2014.87 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
84. MT-ND3 MT-ND3 224.25 1975.58
85. RPL18A 221.06 1947.47 ribosomal protein L18a
86. STMN1 ENSGALG00000001475 221.06 1947.47 stathmin 1 [Source:NCBI gene;Acc:396057]
87. HSPA8 ENSGALG00000006512 219.79 1936.28 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
88. RPS13 ENSGALG00000006096 219.79 1936.28 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
89. ENO1 ENSGALG00000002377 217.24 1913.82 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
90. RPL24 ENSGALG00000015339 213.42 1880.17 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
91. RPS25 ENSGALG00000007699 210.87 1857.70 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
92. ATP5G3 210.23 1852.06 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
93. RPL7 ENSGALG00000035252 207.68 1829.60 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
94. EEF1D 205.77 1812.77 eukaryotic translation elongation factor 1 delta, transcript variant X13
95. RPL31 ENSGALG00000016775 202.59 1784.76 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
96. PRDX1 ENSGALG00000010243 201.31 1773.48 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
97. RPL10A ENSGALG00000002644 200.68 1767.93 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
98. HBE 196.85 1734.19 hemoglobin subunit epsilon
99. UBB ENSGALG00000004509 191.76 1689.35 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
100. HNRNPDL ENSGALG00000023199 191.12 1683.71 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA