Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_embryo, section s62.

Sample reads: 113,595. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4382.07 38577.99
2. EEF1A EEF1A 1122.98 9886.27
3. gga-mir-3533 ENSGALG00000027736 1010.76 8898.33 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
4. MT-ATP6 MT-ATP6 1004.39 8842.25
5. CIRBP ENSGALG00000030918 959.82 8449.87 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
6. RPL35A ENSGALG00000007611, ENSGALG00000041230 886.60 7805.27 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
7. MDK ENSGALG00000008367 863.52 7602.08 midkine [Source:NCBI gene;Acc:423196]
8. MT-ND5 MT-ND5 838.85 7384.90
9. RPL23A ENSGALG00000003966 837.26 7370.90 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
10. RPL4 ENSGALG00000007711 791.10 6964.53 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
11. RPS10 ENSGALG00000002813 771.20 6789.34 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
12. RPLP0 ENSGALG00000023294 767.22 6754.30 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
13. RPLP1 ENSGALG00000030878 709.12 6242.81 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
14. HBG1 HBG1 655.80 5773.40
15. RPL15 ENSGALG00000011290 651.82 5738.36 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
16. GAPDH ENSGALG00000014442 611.23 5381.02 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
17. HBZ ENSGALG00000023740 580.19 5107.76 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
18. RPS23 ENSGALG00000015617 546.76 4813.46 ribosomal protein S23
19. SNRPD1 ENSGALG00000041334 522.89 4603.31 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
20. RPL27A ENSGALG00000005948 516.52 4547.23 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
21. RPS8 ENSGALG00000010124 487.87 4295.01 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
22. RPL38 ENSGALG00000001465 487.07 4287.97 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
23. RPS12 ENSGALG00000013990 480.71 4231.98 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
24. RPL8 ENSGALG00000016232 478.32 4210.94 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
25. MT-ND4 MT-ND4 475.93 4189.90
26. RPL19 ENSGALG00000001658 471.95 4154.86 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
27. RPS21 ENSGALG00000005338 463.20 4077.83 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
28. RPL13 ENSGALG00000006179 457.63 4028.79 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
29. RPSA 453.65 3993.75 ribosomal protein SA
30. PPIA ENSGALG00000028600 452.06 3979.75 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
31. RPL27 ENSGALG00000002837 440.91 3881.59 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
32. RPL7A ENSGALG00000003197 438.53 3860.64 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
33. RPL26 RPL26 435.34 3832.56
34. MT-CYB MT-CYB 429.77 3783.52
35. RPS6 ENSGALG00000015082 422.61 3720.49 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
36. RPS3A ENSGALG00000010077 421.81 3713.45 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
37. RPS15A ENSGALG00000006771 419.42 3692.41 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
38. RPL29 ENSGALG00000026978 411.47 3622.42 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
39. RPS29 ENSGALG00000012229 405.89 3573.29 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
40. HBE 404.30 3559.30 hemoglobin subunit epsilon
41. RPS28 ENSGALG00000024398 397.94 3503.30 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
42. gga-mir-3527 gga-mir-3527 397.14 3496.26
43. RPS11 ENSGALG00000017299 394.75 3475.22 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
44. PHB2 ENSGALG00000014567 393.16 3461.22 prohibitin 2 [Source:NCBI gene;Acc:771124]
45. RPL21 ENSGALG00000027035 391.57 3447.23 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
46. RPL37 ENSGALG00000014833 385.20 3391.15 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
47. RPL35 ENSGALG00000035677 381.22 3356.11 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
48. RPL36 ENSGALG00000000474 378.84 3335.16 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
49. RPS16 ENSGALG00000026490 374.06 3293.07 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
50. TXN ENSGALG00000015704 368.49 3244.04 thioredoxin [Source:NCBI gene;Acc:396437]
51. RPS2 ENSGALG00000005490 366.90 3230.04 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
52. RPL12 ENSGALG00000008806 366.10 3223.00 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
53. RPL32 ENSGALG00000027142 366.10 3223.00 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
54. RPS15 ENSGALG00000015195 361.33 3181.00 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
55. GNB2L1 ENSGALG00000000122 354.96 3124.93 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
56. MT-CO1 MT-CO1 348.59 3068.85
57. HMGN5 ENSGALG00000007131 346.20 3047.81 high mobility group nucleosome binding domain 5, transcript variant X1
58. NME2 ENSGALG00000002932 346.20 3047.81 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
59. ENSGALG00000028649 ENSGALG00000028649 314.37 2767.59
60. RPS27A ENSGALG00000036790 311.98 2746.55 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
61. RPS7 ENSGALG00000016392 311.19 2739.59 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
62. RPS4 RPS4 300.84 2648.47
63. EIF5A2 ENSGALG00000009309 298.45 2627.43 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
64. RPS20 ENSGALG00000014432 292.88 2578.40 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
65. LDHB ENSGALG00000035836 290.49 2557.36 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
66. ANP32B ENSGALG00000037483 289.70 2550.40 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
67. RPL14 ENSGALG00000043379 288.90 2543.36 ribosomal protein L14
68. RPL23 ENSGALG00000001634 286.51 2522.32 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
69. RPL18A 282.53 2487.28 ribosomal protein L18a
70. RPL37A ENSGALG00000011472 280.94 2473.28 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
71. RPS14 ENSGALG00000004588 272.98 2403.21 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
72. ALDOC ENSGALG00000026077 270.60 2382.25 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
73. RPL24 ENSGALG00000015339 265.03 2333.22 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
74. ENSGALG00000002696 ENSGALG00000002696 260.25 2291.14
75. SET ENSGALG00000004701 258.66 2277.14 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
76. RAN ENSGALG00000002569 251.50 2214.11 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
77. ATP5G3 245.13 2158.03 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
78. ENO1 ENSGALG00000002377 244.33 2150.98 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
79. RPL6 ENSGALG00000004818 241.15 2122.99 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
80. ENSGALG00000028992 ENSGALG00000028992 237.97 2094.99
81. MT-ND3 MT-ND3 236.37 2080.91
82. PRDX1 ENSGALG00000010243 235.58 2073.95 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
83. RPL36AL ENSGALG00000004952 233.19 2052.91 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
84. RPL5 ENSGALG00000005922 232.39 2045.87 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
85. TMSB4X ENSGALG00000026383 231.60 2038.91 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
86. FKBP4 ENSGALG00000014331 227.62 2003.88 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
87. CRHOA CRHOA 223.64 1968.84
88. RPLP2 ENSGALG00000034811 221.25 1947.80 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
89. TCEB3 ENSGALG00000034625 220.46 1940.84 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
90. RPS25 ENSGALG00000007699 218.86 1926.76 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
91. MT-ND1 MT-ND1 215.68 1898.76
92. RPL31 ENSGALG00000016775 213.29 1877.72 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
93. HNRNPDL ENSGALG00000023199 212.50 1870.76 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
94. RPL10A ENSGALG00000002644 210.91 1856.77 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
95. RPS13 ENSGALG00000006096 210.91 1856.77 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
96. HSPA8 ENSGALG00000006512 210.11 1849.72 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
97. EEF1D 207.72 1828.68 eukaryotic translation elongation factor 1 delta, transcript variant X13
98. RPL7 ENSGALG00000035252 204.54 1800.69 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
99. STMN1 ENSGALG00000001475 203.74 1793.65 stathmin 1 [Source:NCBI gene;Acc:396057]
100. SLC25A6_1 ENSGALG00000016691 199.76 1758.61 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA