Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_embryo, section s54.

Sample reads: 113,486. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3858.56 34001.36
2. EEF1A EEF1A 1347.29 11872.23
3. CIRBP ENSGALG00000030918 917.39 8083.98 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
4. MT-ATP6 MT-ATP6 877.65 7733.79
5. RPL35A ENSGALG00000007611, ENSGALG00000041230 814.38 7176.26 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
6. RPLP1 ENSGALG00000030878 792.48 6983.28 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
7. RPL23A ENSGALG00000003966 791.67 6976.14 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
8. gga-mir-3533 ENSGALG00000027736 781.93 6890.31 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
9. MT-ND5 MT-ND5 760.84 6704.47
10. RPS10 ENSGALG00000002813 704.06 6204.13 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
11. RPL15 ENSGALG00000011290 579.15 5103.43 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
12. RPLP0 ENSGALG00000023294 566.17 4989.05 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
13. MDK ENSGALG00000008367 549.14 4838.98 midkine [Source:NCBI gene;Acc:423196]
14. RPL4 ENSGALG00000007711 529.67 4667.42 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
15. RPS21 ENSGALG00000005338 498.85 4395.83 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
16. GAPDH ENSGALG00000014442 496.41 4374.33 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
17. RPL27A ENSGALG00000005948 472.08 4159.94 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
18. RPS23 ENSGALG00000015617 466.40 4109.88 ribosomal protein S23
19. HMGN5 ENSGALG00000007131 463.97 4088.47 high mobility group nucleosome binding domain 5, transcript variant X1
20. RPS2 ENSGALG00000005490 456.67 4024.14 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
21. RPS8 ENSGALG00000010124 456.67 4024.14 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
22. SNRPD1 ENSGALG00000041334 451.80 3981.23 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
23. RPL35 ENSGALG00000035677 447.75 3945.54 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
24. MT-ND4 MT-ND4 438.82 3866.85
25. RPL13 ENSGALG00000006179 430.71 3795.39 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
26. RPL19 ENSGALG00000001658 429.90 3788.25 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
27. RPL38 ENSGALG00000001465 428.28 3773.97 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
28. RPS15 ENSGALG00000015195 425.84 3752.47 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
29. RPS15A ENSGALG00000006771 412.87 3638.18 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
30. RPL29 ENSGALG00000026978 410.43 3616.68 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
31. RPSA 410.43 3616.68 ribosomal protein SA
32. RPL7A ENSGALG00000003197 402.32 3545.22 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
33. RPS29 ENSGALG00000012229 402.32 3545.22 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
34. RPL27 ENSGALG00000002837 394.21 3473.75 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
35. RPS6 ENSGALG00000015082 388.53 3423.70 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
36. MT-CYB MT-CYB 384.48 3388.01
37. RPL8 ENSGALG00000016232 383.67 3380.87 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
38. RPL26 RPL26 379.61 3345.10
39. TXN ENSGALG00000015704 365.01 3216.44 thioredoxin [Source:NCBI gene;Acc:396437]
40. SET ENSGALG00000004701 364.20 3209.31 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
41. gga-mir-3527 gga-mir-3527 364.20 3209.31
42. RPS12 ENSGALG00000013990 362.58 3195.03 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
43. RPS3A ENSGALG00000010077 356.09 3137.84 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
44. NME2 ENSGALG00000002932 347.16 3059.15 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
45. RPS27A ENSGALG00000036790 346.35 3052.01 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
46. TMSB4X ENSGALG00000026383 343.11 3023.46 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
47. RPL12 ENSGALG00000008806 334.19 2944.86 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
48. RPL37A ENSGALG00000011472 327.70 2887.67 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
49. RPS4 RPS4 322.02 2837.62
50. RPS11 ENSGALG00000017299 319.59 2816.20 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
51. PPIA ENSGALG00000028600 317.15 2794.70 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
52. RPL32 ENSGALG00000027142 317.15 2794.70 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
53. MT-CO1 MT-CO1 316.34 2787.57
54. RPL24 ENSGALG00000015339 309.85 2730.38 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
55. RPL37 ENSGALG00000014833 306.61 2701.83 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
56. RPS16 ENSGALG00000026490 304.17 2680.32 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
57. GNB2L1 ENSGALG00000000122 301.74 2658.91 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
58. RPL36 ENSGALG00000000474 301.74 2658.91 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
59. RPL21 ENSGALG00000027035 297.69 2623.22 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
60. RPL14 ENSGALG00000043379 296.87 2616.00 ribosomal protein L14
61. RAN ENSGALG00000002569 295.25 2601.72 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
62. TCEB3 ENSGALG00000034625 294.44 2594.58 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
63. LDHB ENSGALG00000035836 292.01 2573.17 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
64. EIF5A2 ENSGALG00000009309 289.57 2551.67 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
65. ANP32B ENSGALG00000037483 287.95 2537.40 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
66. PHB2 ENSGALG00000014567 281.46 2480.21 prohibitin 2 [Source:NCBI gene;Acc:771124]
67. RPL18A 274.97 2423.02 ribosomal protein L18a
68. RPS14 ENSGALG00000004588 271.73 2394.47 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
69. ATP5G3 267.67 2358.69 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
70. RPL6 ENSGALG00000004818 263.62 2323.00 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
71. RPL7 ENSGALG00000035252 259.56 2287.22 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
72. RPS20 ENSGALG00000014432 259.56 2287.22 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
73. RPL36AL ENSGALG00000004952 256.32 2258.67 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
74. RPS28 ENSGALG00000024398 253.07 2230.04 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
75. RPL23 ENSGALG00000001634 248.21 2187.21 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
76. EIF4G2 ENSGALG00000005587 247.40 2180.07 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
77. PRDX1 ENSGALG00000010243 247.40 2180.07 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
78. HSPA8 ENSGALG00000006512 246.58 2172.85 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
79. RPS7 ENSGALG00000016392 242.53 2137.16 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
80. ENO1 ENSGALG00000002377 240.10 2115.74 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
81. RPL5 ENSGALG00000005922 232.79 2051.33 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
82. STMN1 ENSGALG00000001475 229.55 2022.78 stathmin 1 [Source:NCBI gene;Acc:396057]
83. RPS17 ENSGALG00000002157 227.12 2001.37 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
84. UBB ENSGALG00000004509 226.31 1994.23 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
85. RPS25 ENSGALG00000007699 219.01 1929.90 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
86. ALDOC ENSGALG00000026077 216.57 1908.40 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
87. H3-IX H3-IX 213.33 1879.85
88. HNRNPDL ENSGALG00000023199 212.52 1872.71 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
89. ENSGALG00000028649 ENSGALG00000028649 210.89 1858.35
90. TCP1 ENSGALG00000011637 210.08 1851.21 t-complex 1 [Source:NCBI gene;Acc:421586]
91. MT-ND3 MT-ND3 208.46 1836.94
92. RPL10A ENSGALG00000002644 208.46 1836.94 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
93. SLC25A6_1 ENSGALG00000016691 208.46 1836.94 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
94. ENSGALG00000018384 ENSGALG00000018384 204.41 1801.25
95. HBG1 HBG1 204.41 1801.25
96. EEF1D 202.78 1786.88 eukaryotic translation elongation factor 1 delta, transcript variant X13
97. ENSGALG00000002696 ENSGALG00000002696 201.16 1772.61
98. CRHOA CRHOA 200.35 1765.47
99. SEC61G ENSGALG00000037863 194.67 1715.42 Sec61 translocon gamma subunit [Source:NCBI gene;Acc:776639]
100. RPS13 ENSGALG00000006096 184.13 1622.54 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA