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Experiment Chicken_E3_embryo, section s44.

Sample reads: 113,684. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4156.78 36568.60
2. EEF1A EEF1A 1612.65 14187.03
3. HBG1 HBG1 1247.18 10971.86
4. HBZ ENSGALG00000023740 1225.84 10784.13 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
5. gga-mir-3533 ENSGALG00000027736 1063.73 9357.99 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
6. RPLP0 ENSGALG00000023294 1040.97 9157.77 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
7. MT-ATP6 MT-ATP6 995.47 8757.49
8. RPL35A ENSGALG00000007611, ENSGALG00000041230 991.20 8719.92 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
9. CIRBP ENSGALG00000030918 984.09 8657.37 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
10. MT-ND5 MT-ND5 938.58 8257.01
11. HBE 880.28 7744.12 hemoglobin subunit epsilon
12. RPS10 ENSGALG00000002813 857.52 7543.89 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
13. RPLP1 ENSGALG00000030878 806.33 7093.56 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
14. RPL23A ENSGALG00000003966 730.96 6430.50 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
15. RPL4 ENSGALG00000007711 719.58 6330.39 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
16. GAPDH ENSGALG00000014442 702.51 6180.22 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
17. MDK ENSGALG00000008367 593.01 5216.91 midkine [Source:NCBI gene;Acc:423196]
18. RPL15 ENSGALG00000011290 593.01 5216.91 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
19. RPS23 ENSGALG00000015617 570.26 5016.77 ribosomal protein S23
20. RPL27A ENSGALG00000005948 538.97 4741.50 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
21. SNRPD1 ENSGALG00000041334 506.27 4453.83 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
22. RPS8 ENSGALG00000010124 503.42 4428.76 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
23. RPS21 ENSGALG00000005338 483.51 4253.60 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
24. RPL19 ENSGALG00000001658 470.71 4141.00 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
25. PPIA ENSGALG00000028600 466.45 4103.52 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
26. RPL13 ENSGALG00000006179 459.34 4040.97 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
27. MT-ND4 MT-ND4 455.07 4003.40
28. RPSA 450.80 3965.84 ribosomal protein SA
29. RPL29 ENSGALG00000026978 442.27 3890.80 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
30. RPS15 ENSGALG00000015195 432.32 3803.27 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
31. RPL7A ENSGALG00000003197 429.47 3778.19 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
32. RPS2 ENSGALG00000005490 426.63 3753.21 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
33. RPS29 ENSGALG00000012229 422.36 3715.64 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
34. MT-CYB MT-CYB 416.67 3665.59
35. RPL12 ENSGALG00000008806 410.99 3615.62 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
36. RPL26 RPL26 408.14 3590.55
37. RPS4 RPS4 405.30 3565.56
38. RPS28 ENSGALG00000024398 402.45 3540.49 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
39. RPL36 ENSGALG00000000474 401.03 3528.00 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
40. RPS3A ENSGALG00000010077 401.03 3528.00 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
41. RPS6 ENSGALG00000015082 396.76 3490.43 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
42. RPL27 ENSGALG00000002837 388.23 3415.39 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
43. gga-mir-3527 gga-mir-3527 386.81 3402.90
44. ENSGALG00000028649 ENSGALG00000028649 383.97 3377.91
45. RPL38 ENSGALG00000001465 383.97 3377.91 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
46. RPL8 ENSGALG00000016232 382.54 3365.33 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
47. TXN ENSGALG00000015704 381.12 3352.84 thioredoxin [Source:NCBI gene;Acc:396437]
48. RPS15A ENSGALG00000006771 376.85 3315.28 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
49. RPS11 ENSGALG00000017299 375.43 3302.78 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
50. RPS27A ENSGALG00000036790 369.74 3252.73 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
51. RPS16 ENSGALG00000026490 364.06 3202.76 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
52. RPS12 ENSGALG00000013990 358.37 3152.70 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
53. NME2 ENSGALG00000002932 355.52 3127.63 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
54. HMGN5 ENSGALG00000007131 351.26 3090.15 high mobility group nucleosome binding domain 5, transcript variant X1
55. RPL37 ENSGALG00000014833 342.72 3015.02 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
56. GNB2L1 ENSGALG00000000122 341.30 3002.53 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
57. ALDOC ENSGALG00000026077 338.46 2977.55 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
58. RPL32 ENSGALG00000027142 324.24 2852.45 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
59. RPL35 ENSGALG00000035677 310.02 2727.35 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
60. MT-CO1 MT-CO1 304.33 2677.29
61. RPL18A 304.33 2677.29 ribosomal protein L18a
62. PHB2 ENSGALG00000014567 297.22 2614.75 prohibitin 2 [Source:NCBI gene;Acc:771124]
63. RPL21 ENSGALG00000027035 295.80 2602.25 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
64. ANP32B ENSGALG00000037483 294.37 2589.67 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
65. RPS7 ENSGALG00000016392 287.26 2527.12 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
66. RPL37A ENSGALG00000011472 283.00 2489.65 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
67. RPL7 ENSGALG00000035252 275.89 2427.10 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
68. RPL24 ENSGALG00000015339 264.51 2326.98 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
69. RPS14 ENSGALG00000004588 264.51 2326.98 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
70. EIF5A2 ENSGALG00000009309 258.82 2276.93 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
71. RPL6 ENSGALG00000004818 257.40 2264.43 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
72. RPL14 ENSGALG00000043379 255.98 2251.94 ribosomal protein L14
73. RPL23 ENSGALG00000001634 253.13 2226.87 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
74. TMSB4X ENSGALG00000026383 250.29 2201.89 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
75. TCEB3 ENSGALG00000034625 248.87 2189.39 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
76. RAN ENSGALG00000002569 247.44 2176.81 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
77. LDHB ENSGALG00000035836 244.60 2151.83 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
78. ENSGALG00000002696 ENSGALG00000002696 238.91 2101.77
79. ENO1 ENSGALG00000002377 234.65 2064.30 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
80. RPLP2 ENSGALG00000034811 234.65 2064.30 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
81. RPL5 ENSGALG00000005922 233.22 2051.72 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
82. RPL36AL ENSGALG00000004952 231.80 2039.22 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
83. SET ENSGALG00000004701 231.80 2039.22 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
84. ATP5G3 227.53 2001.66 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
85. CRHOA CRHOA 223.27 1964.18
86. UBB ENSGALG00000004509 223.27 1964.18 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
87. ENSGALG00000028992 ENSGALG00000028992 220.42 1939.11
88. RPS20 ENSGALG00000014432 219.00 1926.62 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
89. MT-ND3 MT-ND3 214.74 1889.14
90. EEF1D 213.31 1876.56 eukaryotic translation elongation factor 1 delta, transcript variant X13
91. RPL10A ENSGALG00000002644 211.89 1864.07 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
92. RPS13 ENSGALG00000006096 211.89 1864.07 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
93. RPS25 ENSGALG00000007699 211.89 1864.07 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
94. SLC25A6_1 ENSGALG00000016691 209.05 1839.08 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
95. MT-ND1 MT-ND1 207.63 1826.59
96. STMN1 ENSGALG00000001475 199.09 1751.46 stathmin 1 [Source:NCBI gene;Acc:396057]
97. FKBP4 ENSGALG00000014331 194.83 1713.99 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
98. SEC61G ENSGALG00000037863 191.98 1688.91 Sec61 translocon gamma subunit [Source:NCBI gene;Acc:776639]
99. RPL31 ENSGALG00000016775 190.56 1676.42 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
100. SFPQ ENSGALG00000002514 189.14 1663.93 splicing factor proline and glutamine rich [Source:HGNC Symbol;Acc:HGNC:10774]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA