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Experiment Chicken_E3_embryo, section s10.

Sample reads: 113,928. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 2370.63 20810.15
2. CIRBP ENSGALG00000030918 1364.22 11975.56 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
3. RPL35A ENSGALG00000007611, ENSGALG00000041230 1349.09 11842.75 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
4. RPS21 ENSGALG00000005338 1124.24 9868.94 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
5. RPL23A ENSGALG00000003966 1097.22 9631.75 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
6. EEF1A EEF1A 1050.73 9223.65
7. RPLP1 ENSGALG00000030878 1048.57 9204.69 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
8. RPS23 ENSGALG00000015617 964.25 8464.50 ribosomal protein S23
9. RPS10 ENSGALG00000002813 940.47 8255.75 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
10. RPS8 ENSGALG00000010124 837.78 7354.30 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
11. RPL4 ENSGALG00000007711 831.29 7297.33 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
12. RPS15 ENSGALG00000015195 816.16 7164.52 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
13. RPL13 ENSGALG00000006179 811.83 7126.51 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
14. RPL35 ENSGALG00000035677 808.59 7098.06 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
15. SNRPD1 ENSGALG00000041334 758.86 6661.52 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
16. RPL27 ENSGALG00000002837 638.87 5608.21 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
17. RPL27A ENSGALG00000005948 614.01 5389.98 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
18. RPS15A ENSGALG00000006771 612.93 5380.50 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
19. RPL15 ENSGALG00000011290 602.12 5285.60 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
20. RPL29 ENSGALG00000026978 571.85 5019.88 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
21. RPL36 ENSGALG00000000474 549.15 4820.62 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
22. gga-mir-3527 gga-mir-3527 541.58 4754.16
23. RPL7A ENSGALG00000003197 509.15 4469.48 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
24. RPL32 ENSGALG00000027142 489.69 4298.66 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
25. RPL19 ENSGALG00000001658 483.21 4241.77 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
26. RPSA 483.21 4241.77 ribosomal protein SA
27. RPL23 ENSGALG00000001634 460.51 4042.51 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
28. RPS27A ENSGALG00000036790 455.10 3995.01 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
29. TXN ENSGALG00000015704 454.02 3985.53 thioredoxin [Source:NCBI gene;Acc:396437]
30. RPS16 ENSGALG00000026490 442.13 3881.16 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
31. RPS29 ENSGALG00000012229 442.13 3881.16 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
32. RPL14 ENSGALG00000043379 441.05 3871.68 ribosomal protein L14
33. RPL12 ENSGALG00000008806 437.81 3843.24 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
34. RPS2 ENSGALG00000005490 437.81 3843.24 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
35. EIF5A2 ENSGALG00000009309 429.16 3767.30 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
36. RAN ENSGALG00000002569 429.16 3767.30 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
37. RPS4 RPS4 421.59 3700.85
38. TCEB3 ENSGALG00000034625 416.19 3653.45 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
39. RPS12 ENSGALG00000013990 403.21 3539.51 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
40. RPL24 ENSGALG00000015339 399.97 3511.07 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
41. MT-ND5 MT-ND5 387.00 3397.21
42. RPS11 ENSGALG00000017299 371.86 3264.31 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
43. RPL31 ENSGALG00000016775 366.46 3216.90 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
44. RPL36AL ENSGALG00000004952 366.46 3216.90 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
45. TMSB4X ENSGALG00000026383 365.38 3207.42 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
46. GAPDH ENSGALG00000014442 361.05 3169.41 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
47. RPL37 ENSGALG00000014833 359.97 3159.93 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
48. ATP5G3 351.33 3084.09 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
49. PPIA ENSGALG00000028600 351.33 3084.09 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
50. RPL38 ENSGALG00000001465 349.16 3065.04 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
51. MT-ATP6 MT-ATP6 348.08 3055.56
52. HBG1 HBG1 342.68 3008.16
53. RPL7 ENSGALG00000035252 342.68 3008.16 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
54. RPS17 ENSGALG00000002157 342.68 3008.16 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
55. RPS14 ENSGALG00000004588 341.60 2998.67 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
56. RPL8 ENSGALG00000016232 338.35 2970.15 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
57. RPL18A 337.27 2960.66 ribosomal protein L18a
58. MT-ND4 MT-ND4 325.38 2856.29
59. RPL26 RPL26 325.38 2856.29
60. RPS7 ENSGALG00000016392 325.38 2856.29 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
61. RPS3A ENSGALG00000010077 315.65 2770.88 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
62. gga-mir-3533 ENSGALG00000027736 315.65 2770.88 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
63. MT-CYB MT-CYB 314.57 2761.40
64. GNB2L1 ENSGALG00000000122 313.49 2751.92 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
65. RPS13 ENSGALG00000006096 313.49 2751.92 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
66. LDHB ENSGALG00000035836 304.84 2675.98 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
67. PRDX1 ENSGALG00000010243 302.68 2657.02 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
68. NME2 ENSGALG00000002932 299.44 2628.58 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
69. EIF4G2 ENSGALG00000005587 297.28 2609.62 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
70. H3-IX H3-IX 296.19 2600.05
71. MT-CO1 MT-CO1 282.14 2476.72
72. CRHOA CRHOA 271.33 2381.82
73. HBZ ENSGALG00000023740 270.25 2372.34 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
74. RPL37A ENSGALG00000011472 270.25 2372.34 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
75. ENO1 ENSGALG00000002377 269.17 2362.86 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
76. SSR1 ENSGALG00000012798 257.28 2258.49 signal sequence receptor subunit 1 [Source:NCBI gene;Acc:420871]
77. RPL21 ENSGALG00000027035 252.95 2220.48 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
78. ANP32B ENSGALG00000037483 249.71 2192.03 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
79. ENSGALG00000002696 ENSGALG00000002696 249.71 2192.03
80. RPL6 ENSGALG00000004818 248.63 2182.55 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
81. SET ENSGALG00000004701 244.31 2144.63 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
82. SLC25A6_1 ENSGALG00000016691 244.31 2144.63 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
83. HNRNPDL ENSGALG00000023199 242.14 2125.58 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
84. EEF1D 238.90 2097.14 eukaryotic translation elongation factor 1 delta, transcript variant X13
85. MT-ND3 MT-ND3 234.58 2059.22
86. SEC61G ENSGALG00000037863 221.61 1945.36 Sec61 translocon gamma subunit [Source:NCBI gene;Acc:776639]
87. RPLP0 ENSGALG00000023294 219.44 1926.32 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
88. RPL5 ENSGALG00000005922 218.36 1916.83 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
89. STMN1 ENSGALG00000001475 218.36 1916.83 stathmin 1 [Source:NCBI gene;Acc:396057]
90. RPS3 ENSGALG00000017330 217.28 1907.35 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
91. ALDOC ENSGALG00000026077 215.12 1888.39 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
92. SFPQ ENSGALG00000002514 212.96 1869.43 splicing factor proline and glutamine rich [Source:HGNC Symbol;Acc:HGNC:10774]
93. TCP1 ENSGALG00000011637 212.96 1869.43 t-complex 1 [Source:NCBI gene;Acc:421586]
94. EIF1 ENSGALG00000028517 209.71 1840.90 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
95. CCT4 ENSGALG00000008812 207.55 1821.94 chaperonin containing TCP1 subunit 4 [Source:NCBI gene;Acc:395414]
96. HBE 207.55 1821.94 hemoglobin subunit epsilon
97. HMGN5 ENSGALG00000007131 192.42 1689.12 high mobility group nucleosome binding domain 5, transcript variant X1
98. FKBP12 FKBP12 191.34 1679.64
99. RPS24 ENSGALG00000004871 190.26 1670.16 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
100. CHCHD2 ENSGALG00000002495 189.18 1660.68 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:417544]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA