Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_aorta, section s73.

Sample reads: 235,399. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. HBZ ENSGALG00000023740 10175.00 43227.97 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
2. HBG1 HBG1 8622.00 36630.13
3. HBE 6748.00 28668.54 hemoglobin subunit epsilon
4. MT-CO3 MT-CO3 4213.00 17898.72
5. RPLP0 ENSGALG00000023294 3384.00 14376.75 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
6. RPL35A ENSGALG00000007611, ENSGALG00000041230 2984.00 12677.37 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
7. RPS15 ENSGALG00000015195 2893.00 12290.76 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
8. RPS10 ENSGALG00000002813 2447.00 10395.96 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
9. RPS29 ENSGALG00000012229 2258.00 9593.00 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
10. gga-mir-3533 ENSGALG00000027736 2252.00 9567.51 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
11. RPL13 ENSGALG00000006179 2131.00 9053.45 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
12. RPL4 ENSGALG00000007711 2007.00 8526.64 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
13. RPS4 RPS4 1892.00 8038.07
14. RPL23A ENSGALG00000003966 1863.00 7914.86 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
15. RPS2 ENSGALG00000005490 1637.00 6954.71 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
16. RPS28 ENSGALG00000024398 1583.00 6725.30 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
17. gga-mir-3527 gga-mir-3527 1519.00 6453.39
18. EEF1A EEF1A 1498.00 6364.18
19. RPS8 ENSGALG00000010124 1465.00 6223.98 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
20. RPS15A ENSGALG00000006771 1444.00 6134.76 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
21. GAPDH ENSGALG00000014442 1416.00 6015.80 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
22. RPL15 ENSGALG00000011290 1402.00 5956.33 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
23. RPS14 ENSGALG00000004588 1390.00 5905.34 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
24. RPS21 ENSGALG00000005338 1390.00 5905.34 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
25. RPSA 1389.00 5901.10 ribosomal protein SA
26. RPL35 ENSGALG00000035677 1362.00 5786.39 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
27. RPL7A ENSGALG00000003197 1346.00 5718.41 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
28. PPIA ENSGALG00000028600 1340.00 5692.92 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
29. RPLP1 ENSGALG00000030878 1323.00 5620.70 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
30. RPL24 ENSGALG00000015339 1279.00 5433.77 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
31. RPL29 ENSGALG00000026978 1270.00 5395.53 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
32. RPL27A ENSGALG00000005948 1262.00 5361.54 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
33. RPL19 ENSGALG00000001658 1204.00 5115.13 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
34. RPL27 ENSGALG00000002837 1153.00 4898.46 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
35. RPL36 ENSGALG00000000474 1092.00 4639.31 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
36. RPL38 ENSGALG00000001465 1055.00 4482.11 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
37. MT-ND3 MT-ND3 1053.00 4473.62
38. RPL32 ENSGALG00000027142 1023.00 4346.16 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
39. RPS12 ENSGALG00000013990 1016.00 4316.42 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
40. RPL26 RPL26 984.00 4180.47
41. RPS23 ENSGALG00000015617 979.00 4159.23 ribosomal protein S23
42. RPS7 ENSGALG00000016392 962.00 4087.01 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
43. RPL7 ENSGALG00000035252 949.00 4031.78 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
44. RPL18A 944.00 4010.54 ribosomal protein L18a
45. SNRPD1 ENSGALG00000041334 938.00 3985.05 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
46. RPL6 ENSGALG00000004818 916.00 3891.58 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
47. RPS3A ENSGALG00000010077 904.00 3840.60 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
48. RPL14 ENSGALG00000043379 899.00 3819.36 ribosomal protein L14
49. TMSB4X ENSGALG00000026383 891.00 3785.37 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
50. RPS27A ENSGALG00000036790 883.00 3751.38 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
51. RPS16 ENSGALG00000026490 854.00 3628.18 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
52. RPL12 ENSGALG00000008806 849.00 3606.93 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
53. RPL8 ENSGALG00000016232 837.00 3555.95 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
54. RPL36AL ENSGALG00000004952 829.00 3521.96 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
55. RPS17 ENSGALG00000002157 790.00 3356.27 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
56. ANP32B ENSGALG00000037483 775.00 3292.55 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
57. TCEB3 ENSGALG00000034625 745.00 3165.09 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
58. MT-ATP6 MT-ATP6 724.00 3075.88
59. MT-ND5 MT-ND5 723.00 3071.63
60. MDK ENSGALG00000008367 718.00 3050.39 midkine [Source:NCBI gene;Acc:423196]
61. RPL10A ENSGALG00000002644 714.00 3033.39 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
62. RPL23 ENSGALG00000001634 713.00 3029.14 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
63. NME2 ENSGALG00000002932 710.00 3016.40 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
64. RPS24 ENSGALG00000004871 694.00 2948.42 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
65. RPS25 ENSGALG00000007699 692.00 2939.93 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
66. RPS11 ENSGALG00000017299 688.00 2922.93 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
67. PRDX1 ENSGALG00000010243 687.00 2918.68 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
68. RPL5 ENSGALG00000005922 680.00 2888.95 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
69. RPL21 ENSGALG00000027035 667.00 2833.72 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
70. GNB2L1 ENSGALG00000000122 657.00 2791.23 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
71. ENSGALG00000028992 ENSGALG00000028992 647.00 2748.75
72. FTH FTH 618.00 2625.54
73. ALDOC ENSGALG00000026077 617.00 2621.29 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
74. RPS3 ENSGALG00000017330 616.00 2617.04 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
75. MT-ND1 MT-ND1 606.00 2574.56
76. RPS13 ENSGALG00000006096 578.00 2455.60 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
77. EEF1D 566.00 2404.62 eukaryotic translation elongation factor 1 delta, transcript variant X13
78. UBB ENSGALG00000004509 556.00 2362.14 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
79. RPL37 ENSGALG00000014833 552.00 2345.14 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
80. CIRBP ENSGALG00000030918 547.00 2323.90 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
81. MT-ND4 MT-ND4 542.00 2302.66
82. RPL37A ENSGALG00000011472 520.00 2209.19 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
83. ENO1 ENSGALG00000002377 516.00 2192.20 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
84. RAN ENSGALG00000002569 503.00 2136.97 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
85. EIF5A2 ENSGALG00000009309 497.00 2111.48 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
86. MT-ND6 MT-ND6 469.00 1992.52
87. LDHB ENSGALG00000035836 463.00 1967.03 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
88. ATP5G3 435.00 1848.08 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
89. TXN ENSGALG00000015704 411.00 1746.11 thioredoxin [Source:NCBI gene;Acc:396437]
90. RPS20 ENSGALG00000014432 403.00 1712.13 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
91. MMP15 ENSGALG00000038758 396.00 1682.39 matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]
92. MT-CO1 MT-CO1 395.00 1678.14
93. SLC25A6_1 ENSGALG00000016691 393.00 1669.64 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
94. MT-CYB MT-CYB 391.00 1661.14
95. RPL31 ENSGALG00000016775 390.00 1656.90 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
96. ZNF593 ENSGALG00000000542 381.00 1618.66 zinc finger protein 593 [Source:NCBI gene;Acc:419549]
97. RPL22 ENSGALG00000000719 374.00 1588.92 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
98. RPS6 ENSGALG00000015082 373.00 1584.67 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
99. ENSGALG00000022570 ENSGALG00000022570 371.00 1576.17
100. ENSGALG00000028649 ENSGALG00000028649 364.00 1546.44
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA