Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_aorta, section s69.

Sample reads: 235,191. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. HBZ ENSGALG00000023740 9465.00 40246.62 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
2. HBG1 HBG1 7567.00 32176.04
3. HBE 5516.00 23454.87 hemoglobin subunit epsilon
4. MT-CO3 MT-CO3 4917.00 20907.83
5. RPLP0 ENSGALG00000023294 3306.00 14057.62 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
6. RPS15 ENSGALG00000015195 2576.00 10953.55 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
7. RPL35A ENSGALG00000007611, ENSGALG00000041230 2419.00 10285.96 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
8. RPS29 ENSGALG00000012229 2313.00 9835.23 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
9. RPS10 ENSGALG00000002813 2250.00 9567.34 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
10. gga-mir-3533 ENSGALG00000027736 2085.00 8865.74 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
11. RPL4 ENSGALG00000007711 1986.00 8444.78 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
12. RPL23A ENSGALG00000003966 1872.00 7960.03 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
13. RPS28 ENSGALG00000024398 1856.00 7892.00 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
14. RPS2 ENSGALG00000005490 1820.00 7738.92 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
15. RPL13 ENSGALG00000006179 1756.00 7466.78 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
16. GAPDH ENSGALG00000014442 1745.00 7420.01 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
17. EEF1A EEF1A 1680.00 7143.62
18. RPS4 RPS4 1629.00 6926.76
19. RPS8 ENSGALG00000010124 1512.00 6429.25 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
20. gga-mir-3527 gga-mir-3527 1508.00 6412.25
21. RPL15 ENSGALG00000011290 1433.00 6093.33 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
22. RPLP1 ENSGALG00000030878 1423.00 6050.81 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
23. RPS21 ENSGALG00000005338 1423.00 6050.81 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
24. RPS14 ENSGALG00000004588 1378.00 5859.47 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
25. RPL29 ENSGALG00000026978 1330.00 5655.36 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
26. RPL7A ENSGALG00000003197 1329.00 5651.11 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
27. RPSA 1263.00 5370.47 ribosomal protein SA
28. RPS15A ENSGALG00000006771 1236.00 5255.66 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
29. RPL19 ENSGALG00000001658 1232.00 5238.65 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
30. PPIA ENSGALG00000028600 1230.00 5230.15 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
31. RPL38 ENSGALG00000001465 1230.00 5230.15 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
32. RPL32 ENSGALG00000027142 1222.00 5196.13 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
33. RPL27A ENSGALG00000005948 1213.00 5157.86 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
34. RPL35 ENSGALG00000035677 1180.00 5017.54 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
35. MT-ND3 MT-ND3 1150.00 4889.98
36. RPL26 RPL26 1142.00 4855.96
37. MT-ATP6 MT-ATP6 1133.00 4817.69
38. RPL6 ENSGALG00000004818 1116.00 4745.40 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
39. RPL18A 1107.00 4707.13 ribosomal protein L18a
40. RPL36 ENSGALG00000000474 1104.00 4694.38 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
41. RPL24 ENSGALG00000015339 1069.00 4545.55 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
42. RPL14 ENSGALG00000043379 1066.00 4532.79 ribosomal protein L14
43. MDK ENSGALG00000008367 1038.00 4413.73 midkine [Source:NCBI gene;Acc:423196]
44. RPL12 ENSGALG00000008806 1000.00 4252.15 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
45. RPL27 ENSGALG00000002837 989.00 4205.38 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
46. RPL8 ENSGALG00000016232 985.00 4188.37 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
47. RPS12 ENSGALG00000013990 973.00 4137.34 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
48. RPS7 ENSGALG00000016392 948.00 4031.04 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
49. RPS16 ENSGALG00000026490 918.00 3903.48 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
50. RPS27A ENSGALG00000036790 897.00 3814.18 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
51. RPL37A ENSGALG00000011472 859.00 3652.60 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
52. MT-ND5 MT-ND5 857.00 3644.09
53. RPS23 ENSGALG00000015617 854.00 3631.34 ribosomal protein S23
54. RPL7 ENSGALG00000035252 819.00 3482.51 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
55. GNB2L1 ENSGALG00000000122 793.00 3371.96 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
56. RPS3A ENSGALG00000010077 790.00 3359.20 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
57. MT-ND1 MT-ND1 779.00 3312.43
58. SNRPD1 ENSGALG00000041334 771.00 3278.41 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
59. RPS11 ENSGALG00000017299 760.00 3231.64 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
60. RPS17 ENSGALG00000002157 757.00 3218.88 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
61. RPS25 ENSGALG00000007699 755.00 3210.38 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
62. TCEB3 ENSGALG00000034625 755.00 3210.38 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
63. RPL36AL ENSGALG00000004952 734.00 3121.08 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
64. MT-ND6 MT-ND6 733.00 3116.83
65. RPL21 ENSGALG00000027035 715.00 3040.29 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
66. MT-ND4 MT-ND4 690.00 2933.99
67. NME2 ENSGALG00000002932 689.00 2929.73 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
68. ENSGALG00000028992 ENSGALG00000028992 686.00 2916.98
69. UBB ENSGALG00000004509 686.00 2916.98 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
70. RPL5 ENSGALG00000005922 685.00 2912.72 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
71. RPL10A ENSGALG00000002644 674.00 2865.95 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
72. TMSB4X ENSGALG00000026383 645.00 2742.64 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
73. FTH FTH 640.00 2721.38
74. RPS3 ENSGALG00000017330 639.00 2717.13 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
75. RPL23 ENSGALG00000001634 628.00 2670.35 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
76. PRDX1 ENSGALG00000010243 622.00 2644.84 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
77. MT-CYB MT-CYB 609.00 2589.56
78. RPS6 ENSGALG00000015082 600.00 2551.29 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
79. RPL37 ENSGALG00000014833 595.00 2530.03 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
80. RPS24 ENSGALG00000004871 592.00 2517.27 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
81. EEF1D 553.00 2351.44 eukaryotic translation elongation factor 1 delta, transcript variant X13
82. RPS13 ENSGALG00000006096 541.00 2300.41 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
83. RPS20 ENSGALG00000014432 541.00 2300.41 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
84. ANP32B ENSGALG00000037483 534.00 2270.65 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
85. ENO1 ENSGALG00000002377 516.00 2194.11 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
86. CIRBP ENSGALG00000030918 500.00 2126.08 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
87. ENSGALG00000018384 ENSGALG00000018384 496.00 2109.07
88. ALDOC ENSGALG00000026077 492.00 2092.06 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
89. RPL31 ENSGALG00000016775 454.00 1930.48 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
90. STMN1 ENSGALG00000001475 452.00 1921.97 stathmin 1 [Source:NCBI gene;Acc:396057]
91. RPL22 ENSGALG00000000719 447.00 1900.71 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
92. ZNF593 ENSGALG00000000542 429.00 1824.17 zinc finger protein 593 [Source:NCBI gene;Acc:419549]
93. LDHB ENSGALG00000035836 416.00 1768.90 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
94. ATP5L ENSGALG00000006899 414.00 1760.39 ATP synthase, H+ transporting, mitochondrial Fo complex subunit G
95. MT-CO1 MT-CO1 410.00 1743.38
96. ATP5G3 384.00 1632.83 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
97. TXN ENSGALG00000015704 382.00 1624.32 thioredoxin [Source:NCBI gene;Acc:396437]
98. CRHOA CRHOA 376.00 1598.81
99. EIF5A2 ENSGALG00000009309 373.00 1586.05 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
100. ENSGALG00000028649 ENSGALG00000028649 367.00 1560.54
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA