Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_aorta, section s59.

Sample reads: 235,627. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. HBZ ENSGALG00000023740 13115.00 55661.66 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
2. HBG1 HBG1 7422.00 31499.87
3. MT-CO3 MT-CO3 5956.00 25277.99
4. HBE 5496.00 23325.69 hemoglobin subunit epsilon
5. RPL35A ENSGALG00000007611, ENSGALG00000041230 3044.00 12919.11 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
6. RPLP0 ENSGALG00000023294 3030.00 12859.69 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
7. RPS15 ENSGALG00000015195 2972.00 12613.53 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
8. RPS10 ENSGALG00000002813 2943.00 12490.45 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
9. RPS29 ENSGALG00000012229 2552.00 10831.00 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
10. RPL23A ENSGALG00000003966 2253.00 9562.01 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
11. RPL4 ENSGALG00000007711 2140.00 9082.42 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
12. RPL13 ENSGALG00000006179 2058.00 8734.40 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
13. RPS28 ENSGALG00000024398 1960.00 8318.48 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
14. RPS21 ENSGALG00000005338 1799.00 7635.18 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
15. RPS8 ENSGALG00000010124 1725.00 7321.11 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
16. RPS2 ENSGALG00000005490 1662.00 7053.73 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
17. EEF1A EEF1A 1660.00 7045.24
18. GAPDH ENSGALG00000014442 1648.00 6994.31 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
19. MT-ND3 MT-ND3 1636.00 6943.38
20. RPS14 ENSGALG00000004588 1636.00 6943.38 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
21. RPL15 ENSGALG00000011290 1583.00 6718.44 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
22. RPL36 ENSGALG00000000474 1566.00 6646.29 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
23. RPL35 ENSGALG00000035677 1562.00 6629.32 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
24. RPS15A ENSGALG00000006771 1554.00 6595.37 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
25. RPL24 ENSGALG00000015339 1526.00 6476.53 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
26. RPS4 RPS4 1497.00 6353.45
27. RPL7A ENSGALG00000003197 1480.00 6281.30 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
28. gga-mir-3527 gga-mir-3527 1437.00 6098.80
29. RPL29 ENSGALG00000026978 1432.00 6077.58 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
30. RPL27A ENSGALG00000005948 1415.00 6005.43 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
31. gga-mir-3533 ENSGALG00000027736 1403.00 5954.50 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
32. RPLP1 ENSGALG00000030878 1394.00 5916.31 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
33. RPL19 ENSGALG00000001658 1382.00 5865.38 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
34. RPSA 1363.00 5784.74 ribosomal protein SA
35. RPL27 ENSGALG00000002837 1300.00 5517.36 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
36. RPL38 ENSGALG00000001465 1295.00 5496.14 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
37. RPL32 ENSGALG00000027142 1276.00 5415.50 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
38. RPL26 RPL26 1267.00 5377.30
39. RPL18A 1259.00 5343.35 ribosomal protein L18a
40. RPS23 ENSGALG00000015617 1161.00 4927.43 ribosomal protein S23
41. RPL14 ENSGALG00000043379 1130.00 4795.86 ribosomal protein L14
42. RPL6 ENSGALG00000004818 1091.00 4630.34 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
43. RPS12 ENSGALG00000013990 1058.00 4490.28 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
44. RPL8 ENSGALG00000016232 1056.00 4481.79 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
45. RPL36AL ENSGALG00000004952 1044.00 4430.86 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
46. RPS7 ENSGALG00000016392 1029.00 4367.20 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
47. RPS16 ENSGALG00000026490 1015.00 4307.78 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
48. RPL7 ENSGALG00000035252 1005.00 4265.34 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
49. RPL12 ENSGALG00000008806 976.00 4142.26 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
50. PPIA ENSGALG00000028600 969.00 4112.55 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
51. RPL21 ENSGALG00000027035 964.00 4091.33 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
52. RPS3A ENSGALG00000010077 964.00 4091.33 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
53. SNRPD1 ENSGALG00000041334 940.00 3989.47 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
54. RPL23 ENSGALG00000001634 888.00 3768.78 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
55. RPS24 ENSGALG00000004871 847.00 3594.77 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
56. RPS17 ENSGALG00000002157 840.00 3565.06 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
57. RPS27A ENSGALG00000036790 823.00 3492.91 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
58. ENSGALG00000028992 ENSGALG00000028992 816.00 3463.20
59. RPL5 ENSGALG00000005922 799.00 3391.05 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
60. NME2 ENSGALG00000002932 763.00 3238.27 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
61. RPS25 ENSGALG00000007699 763.00 3238.27 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
62. TCEB3 ENSGALG00000034625 760.00 3225.53 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
63. RPL10A ENSGALG00000002644 758.00 3217.04 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
64. GNB2L1 ENSGALG00000000122 729.00 3093.96 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
65. RPL37A ENSGALG00000011472 720.00 3055.77 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
66. RPS11 ENSGALG00000017299 717.00 3043.04 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
67. PRDX1 ENSGALG00000010243 715.00 3034.55 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
68. RPS3 ENSGALG00000017330 715.00 3034.55 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
69. MT-ATP6 MT-ATP6 710.00 3013.33
70. TMSB4X ENSGALG00000026383 698.00 2962.40 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
71. MT-ND1 MT-ND1 693.00 2941.18
72. CIRBP ENSGALG00000030918 674.00 2860.54 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
73. RPL37 ENSGALG00000014833 657.00 2788.39 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
74. EEF1D 631.00 2678.04 eukaryotic translation elongation factor 1 delta, transcript variant X13
75. UBB ENSGALG00000004509 595.00 2525.25 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
76. RPS13 ENSGALG00000006096 576.00 2444.61 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
77. MDK ENSGALG00000008367 569.00 2414.91 midkine [Source:NCBI gene;Acc:423196]
78. RPS6 ENSGALG00000015082 528.00 2240.90 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
79. ENO1 ENSGALG00000002377 506.00 2147.53 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
80. ZNF593 ENSGALG00000000542 504.00 2139.04 zinc finger protein 593 [Source:NCBI gene;Acc:419549]
81. LDHB ENSGALG00000035836 482.00 2045.67 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
82. FTH FTH 477.00 2024.45
83. MT-CO1 MT-CO1 477.00 2024.45
84. RPL31 ENSGALG00000016775 475.00 2015.96 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
85. ATP5L ENSGALG00000006899 470.00 1994.74 ATP synthase, H+ transporting, mitochondrial Fo complex subunit G
86. GAL10 GAL10 458.00 1943.81
87. STMN1 ENSGALG00000001475 453.00 1922.59 stathmin 1 [Source:NCBI gene;Acc:396057]
88. MT-ND4 MT-ND4 451.00 1914.10
89. TXN ENSGALG00000015704 451.00 1914.10 thioredoxin [Source:NCBI gene;Acc:396437]
90. RPS20 ENSGALG00000014432 449.00 1905.61 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
91. RPL22 ENSGALG00000000719 417.00 1769.80 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
92. ATP5G3 413.00 1752.82 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
93. MT-ND5 MT-ND5 410.00 1740.09
94. CHCHD2 ENSGALG00000002495 396.00 1680.67 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:417544]
95. RAN ENSGALG00000002569 389.00 1650.96 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
96. MT-ND6 MT-ND6 386.00 1638.23
97. CRHOA CRHOA 367.00 1557.59
98. SEC61G ENSGALG00000037863 365.00 1549.10 Sec61 translocon gamma subunit [Source:NCBI gene;Acc:776639]
99. FKBP12 FKBP12 362.00 1536.37
100. MT-CYB MT-CYB 353.00 1498.18
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA