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Experiment Chicken_E3_anterior_slice_3, section s71.

Sample reads: 124,241. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 6173.14 49690.57
2. MT-ATP6 MT-ATP6 3182.66 25618.76
3. gga-mir-3527 gga-mir-3527 2512.38 20223.35
4. MT-ND5 MT-ND5 2254.58 18148.20
5. GAPDH ENSGALG00000014442 2165.52 17431.31 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
6. MT-CYB MT-CYB 1931.16 15544.83
7. MT-CO1 MT-CO1 1926.47 15507.08
8. MT-ND4 MT-ND4 1860.85 14978.88
9. MT-ND1 MT-ND1 1813.98 14601.60
10. MT-ND3 MT-ND3 1776.48 14299.74
11. EEF1A EEF1A 1528.05 12300.01
12. PPIA ENSGALG00000028600 1073.39 8640.23 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
13. gga-mir-3533 ENSGALG00000027736 904.64 7281.88 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
14. ENO1 ENSGALG00000002377 735.90 5923.61 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
15. RPL5 ENSGALG00000005922 665.59 5357.65 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
16. RPS23 ENSGALG00000015617 656.22 5282.23 ribosomal protein S23
17. NME2 ENSGALG00000002932 562.47 4527.59 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
18. RPS6 ENSGALG00000015082 557.79 4489.92 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
19. ENSGALG00000018386 ENSGALG00000018386 548.41 4414.42
20. RPS3 ENSGALG00000017330 548.41 4414.42 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
21. RPL23 ENSGALG00000001634 534.35 4301.24 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
22. RPL15 ENSGALG00000011290 524.97 4225.74 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
23. ENSGALG00000018384 ENSGALG00000018384 520.29 4188.06
24. RPS4 RPS4 506.23 4074.89
25. RPL8 ENSGALG00000016232 496.85 3999.38 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
26. FKBP4 ENSGALG00000014331 478.10 3848.46 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
27. MT-ND2 MT-ND2 473.41 3810.70
28. RPS7 ENSGALG00000016392 473.41 3810.70 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
29. RPL7 ENSGALG00000035252 468.73 3773.03 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
30. RPL7A ENSGALG00000003197 440.60 3546.60 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
31. ENSGALG00000002696 ENSGALG00000002696 435.92 3508.93
32. RPS10 ENSGALG00000002813 435.92 3508.93 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
33. EIF4G2 ENSGALG00000005587 379.67 3056.15 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
34. RPL26 RPL26 379.67 3056.15
35. RPL18A 374.98 3018.39 ribosomal protein L18a
36. RPL27A ENSGALG00000005948 370.29 2980.64 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
37. RPL35A ENSGALG00000007611, ENSGALG00000041230 360.92 2905.22 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
38. EEF1B2 ENSGALG00000008590 356.23 2867.47 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
39. RPS11 ENSGALG00000017299 356.23 2867.47 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
40. MDK ENSGALG00000008367 351.55 2829.79 midkine [Source:NCBI gene;Acc:423196]
41. MIF ENSGALG00000006326 346.86 2792.04 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
42. STMN1 ENSGALG00000001475 342.17 2754.29 stathmin 1 [Source:NCBI gene;Acc:396057]
43. HBE 337.48 2716.54 hemoglobin subunit epsilon
44. RPSA 323.42 2603.36 ribosomal protein SA
45. CIRBP ENSGALG00000030918 304.67 2452.44 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
46. RPL36 ENSGALG00000000474 295.30 2377.01 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
47. LDHB ENSGALG00000035836 290.61 2339.26 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
48. RPL21 ENSGALG00000027035 290.61 2339.26 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
49. KPNA2 ENSGALG00000003584 285.92 2301.51 karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
50. RPL31 ENSGALG00000016775 285.92 2301.51 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
51. RPS16 ENSGALG00000026490 281.24 2263.84 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
52. SLC25A6_1 ENSGALG00000016691 276.55 2226.08 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
53. RPL6 ENSGALG00000004818 267.17 2150.58 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
54. ATP5G3 257.80 2075.16 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
55. H3-IX H3-IX 257.80 2075.16
56. BTF3L4 ENSGALG00000010570 253.11 2037.40 basic transcription factor 3 like 4 [Source:NCBI gene;Acc:424638]
57. TMSB4X ENSGALG00000026383 253.11 2037.40 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
58. HMGN5 ENSGALG00000007131 248.43 1999.73 high mobility group nucleosome binding domain 5, transcript variant X1
59. MEIS2 ENSGALG00000039118 248.43 1999.73 Meis homeobox 2 [Source:NCBI gene;Acc:395588]
60. RPL27 ENSGALG00000002837 248.43 1999.73 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
61. RPL38 ENSGALG00000001465 248.43 1999.73 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
62. RPS20 ENSGALG00000014432 243.74 1961.98 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
63. NDUFB9 ENSGALG00000042242 239.05 1924.23 NADH:ubiquinone oxidoreductase subunit B9 [Source:HGNC Symbol;Acc:HGNC:7704]
64. RPL29 ENSGALG00000026978 239.05 1924.23 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
65. RPS12 ENSGALG00000013990 239.05 1924.23 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
66. RPS14 ENSGALG00000004588 239.05 1924.23 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
67. RPS24 ENSGALG00000004871 239.05 1924.23 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
68. RAN ENSGALG00000002569 234.36 1886.48 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
69. RPS21 ENSGALG00000005338 234.36 1886.48 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
70. RPS29 ENSGALG00000012229 229.68 1848.80 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
71. RPS8 ENSGALG00000010124 229.68 1848.80 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
72. SNRPG ENSGALG00000028409 229.68 1848.80 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
73. ENSGALG00000028992 ENSGALG00000028992 224.99 1811.05
74. ERH ENSGALG00000017384 224.99 1811.05 ERH, mRNA splicing and mitosis factor [Source:NCBI gene;Acc:423262]
75. RPL13 ENSGALG00000006179 224.99 1811.05 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
76. RPL37 ENSGALG00000014833 224.99 1811.05 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
77. HBG1 HBG1 220.30 1773.30
78. RPS15A ENSGALG00000006771 220.30 1773.30 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
79. RPS27A ENSGALG00000036790 220.30 1773.30 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
80. RPL10A ENSGALG00000002644 210.93 1697.88 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
81. RPL32 ENSGALG00000027142 210.93 1697.88 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
82. TCEB3 ENSGALG00000034625 210.93 1697.88 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
83. EEF1D 201.55 1622.37 eukaryotic translation elongation factor 1 delta, transcript variant X13
84. PGK1 ENSGALG00000007936 201.55 1622.37 phosphoglycerate kinase 1 [Source:NCBI gene;Acc:395833]
85. RPS3A ENSGALG00000010077 201.55 1622.37 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
86. ANP32B ENSGALG00000037483 196.87 1584.70 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
87. CCNB2 ENSGALG00000004161 196.87 1584.70 cyclin B2 [Source:NCBI gene;Acc:415400]
88. RPL23A ENSGALG00000003966 196.87 1584.70 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
89. EIF3F ENSGALG00000005326 192.18 1546.95 eukaryotic translation initiation factor 3 subunit F
90. EIF5A2 ENSGALG00000009309 192.18 1546.95 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
91. HNRNPDL ENSGALG00000023199 192.18 1546.95 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
92. HSPE1 ENSGALG00000009070 187.49 1509.20 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
93. MT-ND6 MT-ND6 182.80 1471.45
94. COX6C ENSGALG00000035996 178.12 1433.77 cytochrome c oxidase subunit 6C [Source:NCBI gene;Acc:420243]
95. IGF2BP3 ENSGALG00000010961 178.12 1433.77 insulin like growth factor 2 mRNA binding protein 3 [Source:NCBI gene;Acc:420617]
96. RPS15 ENSGALG00000015195 178.12 1433.77 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
97. ACO2 ENSGALG00000011950 173.43 1396.02 aconitase 2 [Source:NCBI gene;Acc:374009]
98. HNRNPA3 ENSGALG00000009250 173.43 1396.02 heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:HGNC:24941]
99. RPL37A ENSGALG00000011472 173.43 1396.02 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
100. CRHOA CRHOA 168.74 1358.27
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA