Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Chicken_E3_anterior_slice_3, section s36.

Sample reads: 124,247. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 6001.38 48304.97
2. MT-CO3 MT-CO3 5259.84 42336.33
3. MT-ND5 MT-ND5 3801.71 30599.88
4. gga-mir-3533 ENSGALG00000027736 2553.66 20554.35 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
5. MT-CYB MT-CYB 2477.87 19944.32
6. gga-mir-3527 gga-mir-3527 2362.76 19017.80
7. EEF1A EEF1A 1859.12 14964.01
8. MT-ND4 MT-ND4 1696.04 13651.39
9. MT-CO1 MT-CO1 1679.74 13520.19
10. PPIA ENSGALG00000028600 1470.61 11836.91 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
11. GAPDH ENSGALG00000014442 1309.45 10539.73 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
12. MT-ND1 MT-ND1 1276.83 10277.18
13. MT-ND3 MT-ND3 1274.91 10261.72
14. NME2 ENSGALG00000002932 819.24 6594.04 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
15. RPS23 ENSGALG00000015617 767.44 6177.11 ribosomal protein S23
16. MDK ENSGALG00000008367 730.99 5883.72 midkine [Source:NCBI gene;Acc:423196]
17. RPL5 ENSGALG00000005922 664.80 5350.96 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
18. TMSB4X ENSGALG00000026383 589.97 4748.65 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
19. RPL15 ENSGALG00000011290 499.80 4022.88 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
20. RPS6 ENSGALG00000015082 491.16 3953.34 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
21. ATP6V0C ENSGALG00000009229 462.38 3721.69 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
22. RPL8 ENSGALG00000016232 427.85 3443.75 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
23. RPL7A ENSGALG00000003197 423.05 3405.12 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
24. RPL27A ENSGALG00000005948 408.66 3289.29 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
25. RPL7 ENSGALG00000035252 400.99 3227.56 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
26. ENSGALG00000002696 ENSGALG00000002696 399.07 3212.11
27. STMN1 ENSGALG00000001475 398.11 3204.38 stathmin 1 [Source:NCBI gene;Acc:396057]
28. RPS27A ENSGALG00000036790 396.19 3188.92 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
29. RPL26 RPL26 393.31 3165.74
30. RPS7 ENSGALG00000016392 391.39 3150.29 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
31. RPS4 RPS4 384.68 3096.28
32. RPS3 ENSGALG00000017330 383.72 3088.55 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
33. RPL23 ENSGALG00000001634 375.09 3019.09 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
34. MT-ND2 MT-ND2 370.29 2980.46
35. RPL18A 370.29 2980.46 ribosomal protein L18a
36. EIF4G2 ENSGALG00000005587 359.74 2895.54 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
37. CIRBP ENSGALG00000030918 337.67 2717.90 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
38. RPS11 ENSGALG00000017299 336.71 2710.17 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
39. RPS10 ENSGALG00000002813 335.76 2702.52 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
40. ENO1 ENSGALG00000002377 299.30 2409.06 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
41. ATP5G3 297.38 2393.60 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
42. RPS16 ENSGALG00000026490 294.51 2370.50 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
43. RPS15 ENSGALG00000015195 293.55 2362.78 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
44. CRHOA CRHOA 287.79 2316.42
45. RPL31 ENSGALG00000016775 284.91 2293.23 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
46. EEF1B2 ENSGALG00000008590 280.12 2254.68 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
47. SLC25A6_1 ENSGALG00000016691 280.12 2254.68 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
48. RPS12 ENSGALG00000013990 279.16 2246.95 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
49. RPL21 ENSGALG00000027035 277.24 2231.50 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
50. RPS20 ENSGALG00000014432 277.24 2231.50 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
51. ENSGALG00000018384 ENSGALG00000018384 274.36 2208.32
52. RAN ENSGALG00000002569 271.48 2185.14 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
53. NDUFB9 ENSGALG00000042242 267.64 2154.23 NADH:ubiquinone oxidoreductase subunit B9 [Source:HGNC Symbol;Acc:HGNC:7704]
54. ANP32B ENSGALG00000037483 263.81 2123.40 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
55. RPS24 ENSGALG00000004871 256.13 2061.58 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
56. H3-IX H3-IX 255.17 2053.86
57. RPS14 ENSGALG00000004588 243.66 1961.21 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
58. EIF1 ENSGALG00000028517 242.70 1953.49 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
59. RPL35A ENSGALG00000007611, ENSGALG00000041230 240.78 1938.03 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
60. FKBP4 ENSGALG00000014331 234.07 1884.02 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
61. RPS29 ENSGALG00000012229 233.11 1876.30 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
62. RPL32 ENSGALG00000027142 232.15 1868.57 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
63. RPL38 ENSGALG00000001465 232.15 1868.57 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
64. RPS15A ENSGALG00000006771 232.15 1868.57 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
65. RPS8 ENSGALG00000010124 230.23 1853.12 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
66. RPSA 230.23 1853.12 ribosomal protein SA
67. EIF3F ENSGALG00000005326 223.52 1799.11 eukaryotic translation initiation factor 3 subunit F
68. HMGN5 ENSGALG00000007131 222.56 1791.38 high mobility group nucleosome binding domain 5, transcript variant X1
69. RPL27 ENSGALG00000002837 222.56 1791.38 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
70. RPLP1 ENSGALG00000030878 220.64 1775.93 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
71. RPL36 ENSGALG00000000474 217.76 1752.75 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
72. RPL10A ENSGALG00000002644 214.88 1729.56 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
73. RPL12 ENSGALG00000008806 214.88 1729.56 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
74. H2AFZ ENSGALG00000014023 212.96 1714.11 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
75. MEIS2 ENSGALG00000039118 210.09 1691.01 Meis homeobox 2 [Source:NCBI gene;Acc:395588]
76. TPT1 ENSGALG00000028872 210.09 1691.01 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
77. LDHB ENSGALG00000035836 209.13 1683.28 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
78. RPL37 ENSGALG00000014833 209.13 1683.28 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
79. SNRPG ENSGALG00000028409 208.17 1675.56 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
80. RPL23A ENSGALG00000003966 201.45 1621.47 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
81. ENSGALG00000028992 ENSGALG00000028992 198.58 1598.37
82. RPL4 ENSGALG00000007711 198.58 1598.37 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
83. TXN ENSGALG00000015704 198.58 1598.37 thioredoxin [Source:NCBI gene;Acc:396437]
84. CRABP-I ENSGALG00000003193 195.70 1575.18 cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
85. IGF2BP3 ENSGALG00000010961 195.70 1575.18 insulin like growth factor 2 mRNA binding protein 3 [Source:NCBI gene;Acc:420617]
86. COX7C ENSGALG00000027963 194.74 1567.46 cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
87. RPL14 ENSGALG00000043379 194.74 1567.46 ribosomal protein L14
88. MT-ATP8 MT-ATP8 191.86 1544.28
89. YWHAZ ENSGALG00000031387 181.31 1459.36 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
90. RPL6 ENSGALG00000004818 180.35 1451.63 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
91. RPL29 ENSGALG00000026978 178.43 1436.18 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
92. NONO ENSGALG00000005507 177.47 1428.45 non-POU domain containing octamer binding [Source:NCBI gene;Acc:428701]
93. RPS21 ENSGALG00000005338 177.47 1428.45 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
94. EEF1D 176.51 1420.72 eukaryotic translation elongation factor 1 delta, transcript variant X13
95. RPL13 ENSGALG00000006179 176.51 1420.72 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
96. CALM CALM 175.55 1413.00
97. EIF5A2 ENSGALG00000009309 175.55 1413.00 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
98. RPS3A ENSGALG00000010077 173.63 1397.54 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
99. ERH ENSGALG00000017384 172.67 1389.82 ERH, mRNA splicing and mitosis factor [Source:NCBI gene;Acc:423262]
100. HSPE1 ENSGALG00000009070 171.71 1382.09 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA