Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Chicken_E3_anterior_slice_2, section s65.

Sample reads: 124,235. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3610.48 29061.67
2. MT-ND5 MT-ND5 3418.14 27513.48
3. MT-ATP6 MT-ATP6 3313.54 26671.52
4. gga-mir-3527 gga-mir-3527 2530.71 20370.33
5. EEF1A EEF1A 2027.94 16323.40
6. MT-CO1 MT-CO1 1936.84 15590.12
7. gga-mir-3533 ENSGALG00000027736 1862.60 14992.54 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
8. MT-CYB MT-CYB 1744.50 14041.92
9. MT-ND1 MT-ND1 1596.03 12846.85
10. MT-ND4 MT-ND4 1454.31 11706.11
11. MT-ND3 MT-ND3 1113.51 8962.92
12. GAPDH ENSGALG00000014442 1029.15 8283.89 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
13. NME2 ENSGALG00000002932 965.04 7767.85 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
14. PPIA ENSGALG00000028600 890.81 7170.36 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
15. ENSGALG00000018384 ENSGALG00000018384 701.85 5649.37
16. RPL5 ENSGALG00000005922 674.86 5432.12 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
17. MT-ND2 MT-ND2 600.62 4834.54
18. MDK ENSGALG00000008367 509.52 4101.26 midkine [Source:NCBI gene;Acc:423196]
19. ENO1 ENSGALG00000002377 502.77 4046.92 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
20. RPL7 ENSGALG00000035252 479.15 3856.80 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
21. RPL15 ENSGALG00000011290 448.78 3612.34 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
22. RPL7A ENSGALG00000003197 442.03 3558.01 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
23. RPL8 ENSGALG00000016232 438.66 3530.89 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
24. RPS10 ENSGALG00000002813 435.28 3503.68 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
25. H3-IX H3-IX 425.16 3422.22
26. RPS3 ENSGALG00000017330 425.16 3422.22 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
27. ENSGALG00000018386 ENSGALG00000018386 418.41 3367.89
28. RPL23 ENSGALG00000001634 415.04 3340.76 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
29. RPL26 RPL26 408.29 3286.43
30. RPS4 RPS4 404.91 3259.22
31. RPS7 ENSGALG00000016392 401.54 3232.10 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
32. TMSB4X ENSGALG00000026383 388.04 3123.43 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
33. RPL27 ENSGALG00000002837 371.17 2987.64 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
34. CIRBP ENSGALG00000030918 364.42 2933.31 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
35. ATP6V0C ENSGALG00000009229 344.18 2770.39 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
36. EIF4G2 ENSGALG00000005587 334.05 2688.85 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
37. RPL27A ENSGALG00000005948 334.05 2688.85 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
38. RPSA 334.05 2688.85 ribosomal protein SA
39. RPS27A ENSGALG00000036790 330.68 2661.73 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
40. ATP5G3 327.30 2634.52 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
41. RPS3A ENSGALG00000010077 323.93 2607.39 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
42. RPL18A 313.81 2525.94 ribosomal protein L18a
43. EEF1B2 ENSGALG00000008590 310.43 2498.73 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
44. RPL6 ENSGALG00000004818 310.43 2498.73 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
45. RPS23 ENSGALG00000015617 310.43 2498.73 ribosomal protein S23
46. RPS6 ENSGALG00000015082 310.43 2498.73 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
47. RPL21 ENSGALG00000027035 307.06 2471.60 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
48. STMN1 ENSGALG00000001475 307.06 2471.60 stathmin 1 [Source:NCBI gene;Acc:396057]
49. HMGN5 ENSGALG00000007131 300.31 2417.27 high mobility group nucleosome binding domain 5, transcript variant X1
50. RPS20 ENSGALG00000014432 300.31 2417.27 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
51. TPT1 ENSGALG00000028872 300.31 2417.27 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
52. RPS16 ENSGALG00000026490 293.56 2362.94 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
53. MEIS2 ENSGALG00000039118 290.19 2335.81 Meis homeobox 2 [Source:NCBI gene;Acc:395588]
54. RPS24 ENSGALG00000004871 290.19 2335.81 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
55. RPL4 ENSGALG00000007711 286.81 2308.61 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
56. SLC25A6_1 ENSGALG00000016691 276.69 2227.15 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
57. RPS15A ENSGALG00000006771 269.94 2172.82 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
58. RPL23A ENSGALG00000003966 263.19 2118.48 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
59. CRHOA CRHOA 259.82 2091.36
60. RAN ENSGALG00000002569 253.07 2037.02 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
61. RPLP1 ENSGALG00000030878 249.70 2009.90 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
62. RPS11 ENSGALG00000017299 246.32 1982.69 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
63. RPS14 ENSGALG00000004588 246.32 1982.69 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
64. RPL13 ENSGALG00000006179 236.20 1901.23 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
65. RPS12 ENSGALG00000013990 236.20 1901.23 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
66. EIF1 ENSGALG00000028517 232.83 1874.11 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
67. RPL32 ENSGALG00000027142 232.83 1874.11 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
68. TCEB3 ENSGALG00000034625 232.83 1874.11 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
69. gga-mir-3526 ENSGALG00000029121 232.83 1874.11 gga-mir-3526 [Source:miRBase;Acc:MI0015377]
70. RPL3 ENSGALG00000012172 226.08 1819.78 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
71. RPL31 ENSGALG00000016775 222.70 1792.57 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
72. SNRPG ENSGALG00000028409 222.70 1792.57 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
73. EIF3F ENSGALG00000005326 205.83 1656.78 eukaryotic translation initiation factor 3 subunit F
74. RPL35A ENSGALG00000007611, ENSGALG00000041230 205.83 1656.78 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
75. ENSGALG00000002696 ENSGALG00000002696 202.46 1629.65
76. RPS21 ENSGALG00000005338 202.46 1629.65 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
77. RPL14 ENSGALG00000043379 199.08 1602.45 ribosomal protein L14
78. RPL9 ENSGALG00000000150 199.08 1602.45 ribosomal protein L9 [Source:NCBI gene;Acc:425468]
79. CALM CALM 192.33 1548.11
80. ITGB1BP3 ENSGALG00000030120 192.33 1548.11 integrin beta 1 binding protein 3 [Source:NCBI gene;Acc:415448]
81. HMGN2 HMGN2 185.59 1493.86
82. RPL12 ENSGALG00000008806 182.21 1466.65 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
83. ENSGALG00000028992 ENSGALG00000028992 178.84 1439.53
84. RPL38 ENSGALG00000001465 178.84 1439.53 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
85. RPS29 ENSGALG00000012229 178.84 1439.53 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
86. LDHB ENSGALG00000035836 175.46 1412.32 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
87. RPL36 ENSGALG00000000474 175.46 1412.32 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
88. RPS2 ENSGALG00000005490 175.46 1412.32 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
89. ANP32B ENSGALG00000037483 172.09 1385.20 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
90. GATA5 ENSGALG00000005352 172.09 1385.20 GATA binding protein 5 [Source:NCBI gene;Acc:396391]
91. H2AFZ ENSGALG00000014023 172.09 1385.20 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
92. RPS15 ENSGALG00000015195 172.09 1385.20 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
93. FTH FTH 168.71 1357.99
94. RPL10A ENSGALG00000002644 168.71 1357.99 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
95. RPLP2 ENSGALG00000034811 168.71 1357.99 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
96. COL1A2 ENSGALG00000009641 165.34 1330.86 collagen type I alpha 2 chain [Source:NCBI gene;Acc:396243]
97. HNRNPDL ENSGALG00000023199 161.97 1303.74 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
98. RPLP0 ENSGALG00000023294 161.97 1303.74 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
99. EIF4A2 ENSGALG00000008684 158.59 1276.53 eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
100. ALDH1A2 ENSGALG00000004270 155.22 1249.41 aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA