Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Chicken_E3_anterior_slice_2, section s55.

Sample reads: 124,244. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3830.17 30829.66
2. MT-ND5 MT-ND5 3164.82 25474.15
3. MT-ATP6 MT-ATP6 2870.44 23104.63
4. ENSGALG00000018384 ENSGALG00000018384 2496.67 20096.10
5. EEF1A EEF1A 2102.17 16920.70
6. MT-CO1 MT-CO1 1847.67 14872.19
7. gga-mir-3527 gga-mir-3527 1588.79 12788.43
8. MT-ND1 MT-ND1 1457.16 11728.92
9. MT-CYB MT-CYB 1449.18 11664.68
10. MT-ND4 MT-ND4 1396.53 11240.89
11. GAPDH ENSGALG00000014442 1381.77 11122.09 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
12. gga-mir-3533 ENSGALG00000027736 1307.17 10521.62 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
13. NME2 ENSGALG00000002932 1019.57 8206.68 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
14. MT-ND2 MT-ND2 981.68 7901.70
15. MT-ND3 MT-ND3 937.80 7548.50
16. PPIA ENSGALG00000028600 666.95 5368.39 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
17. MDK ENSGALG00000008367 654.58 5268.82 midkine [Source:NCBI gene;Acc:423196]
18. RPL26 RPL26 610.71 4915.70
19. RPL8 ENSGALG00000016232 590.76 4755.12 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
20. RPL5 ENSGALG00000005922 578.00 4652.42 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
21. ENO1 ENSGALG00000002377 524.54 4222.11 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
22. RPS3 ENSGALG00000017330 506.59 4077.62 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
23. RPL7A ENSGALG00000003197 452.35 3641.04 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
24. ENSGALG00000018386 ENSGALG00000018386 444.37 3576.81
25. RPS6 ENSGALG00000015082 430.80 3467.58 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
26. RPS7 ENSGALG00000016392 428.81 3451.56 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
27. TMSB4X ENSGALG00000026383 428.81 3451.56 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
28. RPL15 ENSGALG00000011290 421.63 3393.77 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
29. RPL7 ENSGALG00000035252 417.64 3361.65 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
30. RPS20 ENSGALG00000014432 417.64 3361.65 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
31. RPL23 ENSGALG00000001634 416.05 3348.85 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
32. STMN1 ENSGALG00000001475 408.07 3284.62 stathmin 1 [Source:NCBI gene;Acc:396057]
33. RPL27A ENSGALG00000005948 396.10 3188.27 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
34. CIRBP ENSGALG00000030918 388.52 3127.26 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
35. EIF4G2 ENSGALG00000005587 387.72 3120.82 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
36. RPL21 ENSGALG00000027035 370.17 2979.56 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
37. RPS4 RPS4 356.61 2870.41
38. RPS10 ENSGALG00000002813 351.03 2825.50 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
39. HMGN5 ENSGALG00000007131 344.24 2770.84 high mobility group nucleosome binding domain 5, transcript variant X1
40. RAN ENSGALG00000002569 340.65 2741.95 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
41. RPSA 327.89 2639.24 ribosomal protein SA
42. RPS27A ENSGALG00000036790 324.70 2613.56 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
43. RPS23 ENSGALG00000015617 324.30 2610.34 ribosomal protein S23
44. RPS24 ENSGALG00000004871 324.30 2610.34 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
45. H3-IX H3-IX 321.91 2591.11
46. RPL27 ENSGALG00000002837 317.92 2558.99 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
47. EEF1B2 ENSGALG00000008590 317.12 2552.55 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
48. RPL31 ENSGALG00000016775 307.55 2475.52 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
49. ATP6V0C ENSGALG00000009229 290.00 2334.26 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
50. RPS16 ENSGALG00000026490 281.62 2266.80 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
51. RPS12 ENSGALG00000013990 277.63 2234.69 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
52. RPS11 ENSGALG00000017299 270.05 2173.68 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
53. ENSGALG00000028992 ENSGALG00000028992 267.26 2151.22
54. RPL4 ENSGALG00000007711 266.46 2144.78 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
55. RPL32 ENSGALG00000027142 265.66 2138.34 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
56. RPS15A ENSGALG00000006771 264.07 2125.54 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
57. SLC25A6_1 ENSGALG00000016691 263.67 2122.32 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
58. RPL14 ENSGALG00000043379 256.09 2061.31 ribosomal protein L14
59. ANP32B ENSGALG00000037483 244.52 1968.18 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
60. RPS3A ENSGALG00000010077 240.53 1936.06 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
61. RPL6 ENSGALG00000004818 238.54 1920.05 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
62. HNRNPDL ENSGALG00000023199 231.36 1862.25 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
63. SNRPG ENSGALG00000028409 230.16 1852.59 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
64. RPL18A 228.17 1836.58 ribosomal protein L18a
65. RPLP1 ENSGALG00000030878 226.57 1823.70 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
66. MEIS2 ENSGALG00000039118 224.98 1810.90 Meis homeobox 2 [Source:NCBI gene;Acc:395588]
67. RPL10A ENSGALG00000002644 224.98 1810.90 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
68. RPL3 ENSGALG00000012172 222.58 1791.58 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
69. CALM CALM 215.40 1733.79
70. LDHB ENSGALG00000035836 213.41 1717.77 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
71. ATP5G3 213.01 1714.55 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
72. RPL23A ENSGALG00000003966 211.81 1704.89 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
73. RPS29 ENSGALG00000012229 211.41 1701.67 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
74. RPL13 ENSGALG00000006179 208.22 1676.00 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
75. BTF3L4 ENSGALG00000010570 207.42 1669.56 basic transcription factor 3 like 4 [Source:NCBI gene;Acc:424638]
76. CDK1 ENSGALG00000003085 206.63 1663.20 cyclin dependent kinase 1 [Source:NCBI gene;Acc:396252]
77. H2AFZ ENSGALG00000014023 206.23 1659.98 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
78. CRHOA CRHOA 205.03 1650.32
79. ENSGALG00000002696 ENSGALG00000002696 202.24 1627.86
80. RPS14 ENSGALG00000004588 199.45 1605.41 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
81. TPT1 ENSGALG00000028872 196.26 1579.73 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
82. MIF ENSGALG00000006326 189.87 1528.29 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
83. RPL35A ENSGALG00000007611, ENSGALG00000041230 188.68 1518.72 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
84. RPL38 ENSGALG00000001465 185.88 1496.18 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
85. RPS15 ENSGALG00000015195 185.09 1489.82 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
86. HMGB1 ENSGALG00000042875 184.29 1483.38 high mobility group box 1 [Source:NCBI gene;Acc:395724]
87. RPL36 ENSGALG00000000474 183.49 1476.94 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
88. NONO ENSGALG00000005507 182.29 1467.28 non-POU domain containing octamer binding [Source:NCBI gene;Acc:428701]
89. EIF1 ENSGALG00000028517 179.50 1444.82 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
90. RPS8 ENSGALG00000010124 177.91 1432.03 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
91. TCEB3 ENSGALG00000034625 177.11 1425.59 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
92. ERH ENSGALG00000017384 174.32 1403.13 ERH, mRNA splicing and mitosis factor [Source:NCBI gene;Acc:423262]
93. HMGN2 HMGN2 171.13 1377.45
94. PRDX1 ENSGALG00000010243 169.53 1364.57 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
95. IGF2BP3 ENSGALG00000010961 168.33 1354.92 insulin like growth factor 2 mRNA binding protein 3 [Source:NCBI gene;Acc:420617]
96. HMGB2 ENSGALG00000010745 165.14 1329.24 high mobility group box 2 [Source:NCBI gene;Acc:396482]
97. RPLP2 ENSGALG00000034811 165.14 1329.24 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
98. EIF3F ENSGALG00000005326 162.35 1306.78 eukaryotic translation initiation factor 3 subunit F
99. PGK1 ENSGALG00000007936 161.95 1303.56 phosphoglycerate kinase 1 [Source:NCBI gene;Acc:395833]
100. TXN ENSGALG00000015704 161.15 1297.12 thioredoxin [Source:NCBI gene;Acc:396437]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA