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Experiment Chicken_E3_anterior_slice_2, section s53.

Sample reads: 124,234. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ND5 MT-ND5 4492.47 36163.39
2. MT-CO3 MT-CO3 3800.34 30591.90
3. MT-ATP6 MT-ATP6 3746.95 30162.12
4. MT-ND1 MT-ND1 2064.58 16619.41
5. EEF1A EEF1A 2006.47 16151.64
6. gga-mir-3527 gga-mir-3527 1944.11 15649.66
7. MT-CYB MT-CYB 1884.11 15166.67
8. MT-CO1 MT-CO1 1761.74 14181.62
9. MT-ND4 MT-ND4 1739.07 13999.13
10. gga-mir-3533 ENSGALG00000027736 1583.63 12747.87 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
11. GAPDH ENSGALG00000014442 1317.17 10602.93 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
12. NME2 ENSGALG00000002932 1131.03 9104.54 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
13. ENSGALG00000018384 ENSGALG00000018384 1080.01 8693.84
14. MT-ND3 MT-ND3 983.63 7918.00
15. PPIA ENSGALG00000028600 868.82 6993.81 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
16. MDK ENSGALG00000008367 751.66 6050.70 midkine [Source:NCBI gene;Acc:423196]
17. RPL26 RPL26 607.56 4890.72
18. RPL5 ENSGALG00000005922 581.11 4677.81 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
19. MT-ND2 MT-ND2 545.20 4388.74
20. RPL8 ENSGALG00000016232 531.03 4274.67 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
21. ENO1 ENSGALG00000002377 481.42 3875.33 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
22. RPS3 ENSGALG00000017330 474.81 3822.12 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
23. RPL15 ENSGALG00000011290 442.68 3563.48 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
24. RPS7 ENSGALG00000016392 430.40 3464.63 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
25. RPL23 ENSGALG00000001634 424.73 3418.98 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
26. RPL27A ENSGALG00000005948 412.92 3323.92 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
27. RPL7 ENSGALG00000035252 402.99 3243.98 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
28. RPL7A ENSGALG00000003197 402.99 3243.98 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
29. CIRBP ENSGALG00000030918 395.91 3186.99 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
30. EIF4G2 ENSGALG00000005587 394.49 3175.56 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
31. STMN1 ENSGALG00000001475 390.24 3141.35 stathmin 1 [Source:NCBI gene;Acc:396057]
32. TMSB4X ENSGALG00000026383 387.88 3122.35 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
33. RPS10 ENSGALG00000002813 382.68 3080.49 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
34. RPS20 ENSGALG00000014432 376.54 3031.06 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
35. RPS4 RPS4 366.14 2947.35
36. RPS6 ENSGALG00000015082 365.20 2939.78 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
37. RPS27A ENSGALG00000036790 361.89 2913.13 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
38. ATP6V0C ENSGALG00000009229 342.99 2760.99 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
39. RPL21 ENSGALG00000027035 319.84 2574.64 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
40. RPL31 ENSGALG00000016775 314.18 2529.08 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
41. RAN ENSGALG00000002569 312.29 2513.87 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
42. RPS24 ENSGALG00000004871 294.80 2373.08 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
43. RPL27 ENSGALG00000002837 289.14 2327.51 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
44. HMGN5 ENSGALG00000007131 287.25 2312.30 high mobility group nucleosome binding domain 5, transcript variant X1
45. ENSGALG00000028992 ENSGALG00000028992 285.83 2300.87
46. RPS23 ENSGALG00000015617 282.99 2278.01 ribosomal protein S23
47. RPSA 282.99 2278.01 ribosomal protein SA
48. EEF1B2 ENSGALG00000008590 278.74 2243.80 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
49. H3-IX H3-IX 278.74 2243.80
50. RPS11 ENSGALG00000017299 274.96 2213.37 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
51. ENSGALG00000018386 ENSGALG00000018386 274.02 2205.80
52. SLC25A6_1 ENSGALG00000016691 273.07 2198.15 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
53. RPL14 ENSGALG00000043379 270.24 2175.37 ribosomal protein L14
54. RPL6 ENSGALG00000004818 261.73 2106.87 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
55. RPL18A 252.76 2034.66 ribosomal protein L18a
56. RPL32 ENSGALG00000027142 251.34 2023.23 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
57. MEIS2 ENSGALG00000039118 249.92 2011.80 Meis homeobox 2 [Source:NCBI gene;Acc:395588]
58. RPS16 ENSGALG00000026490 248.98 2004.23 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
59. RPL4 ENSGALG00000007711 243.78 1962.38 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
60. RPS15A ENSGALG00000006771 243.78 1962.38 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
61. SNRPG ENSGALG00000028409 243.78 1962.38 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
62. RPL36 ENSGALG00000000474 242.84 1954.81 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
63. HMGN2 HMGN2 237.17 1909.17
64. RPL23A ENSGALG00000003966 231.50 1863.52 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
65. RPLP1 ENSGALG00000030878 229.61 1848.31 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
66. RPS29 ENSGALG00000012229 225.36 1814.10 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
67. EIF1 ENSGALG00000028517 224.88 1810.23 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
68. RPS12 ENSGALG00000013990 224.41 1806.45 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
69. ATP5G3 222.99 1795.02 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
70. CALM CALM 222.52 1791.24
71. RPS14 ENSGALG00000004588 216.85 1745.59 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
72. HNRNPDL ENSGALG00000023199 216.38 1741.81 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
73. RPL13 ENSGALG00000006179 212.60 1711.38 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
74. RPS3A ENSGALG00000010077 212.60 1711.38 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
75. RPL3 ENSGALG00000012172 208.82 1680.96 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
76. TPT1 ENSGALG00000028872 206.46 1661.96 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
77. ANP32B ENSGALG00000037483 205.04 1650.53 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
78. NONO ENSGALG00000005507 205.04 1650.53 non-POU domain containing octamer binding [Source:NCBI gene;Acc:428701]
79. RPL35A ENSGALG00000007611, ENSGALG00000041230 204.57 1646.74 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
80. RPL38 ENSGALG00000001465 204.10 1642.96 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
81. LDHB ENSGALG00000035836 200.79 1616.32 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
82. BTF3L4 ENSGALG00000010570 197.48 1589.67 basic transcription factor 3 like 4 [Source:NCBI gene;Acc:424638]
83. CRHOA CRHOA 193.70 1559.24
84. RPL10A ENSGALG00000002644 191.34 1540.24 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
85. ENSGALG00000002696 ENSGALG00000002696 183.31 1475.61
86. H2AFZ ENSGALG00000014023 182.84 1471.82 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
87. MIF ENSGALG00000006326 181.89 1464.17 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
88. FKBP4 ENSGALG00000014331 180.47 1452.74 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
89. RPL12 ENSGALG00000008806 180.47 1452.74 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
90. RPLP2 ENSGALG00000034811 179.53 1445.18 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
91. EIF3F ENSGALG00000005326 177.17 1426.18 eukaryotic translation initiation factor 3 subunit F
92. EIF5A2 ENSGALG00000009309 171.02 1376.67 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
93. RPS15 ENSGALG00000015195 164.88 1327.25 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
94. ERH ENSGALG00000017384 162.52 1308.25 ERH, mRNA splicing and mitosis factor [Source:NCBI gene;Acc:423262]
95. SNRPE ENSGALG00000000137 160.63 1293.04 small nuclear ribonucleoprotein polypeptide E [Source:NCBI gene;Acc:396180]
96. CDK1 ENSGALG00000003085 159.69 1285.47 cyclin dependent kinase 1 [Source:NCBI gene;Acc:396252]
97. IGF2BP3 ENSGALG00000010961 158.74 1277.82 insulin like growth factor 2 mRNA binding protein 3 [Source:NCBI gene;Acc:420617]
98. PGK1 ENSGALG00000007936 157.32 1266.39 phosphoglycerate kinase 1 [Source:NCBI gene;Acc:395833]
99. PRDX1 ENSGALG00000010243 157.32 1266.39 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
100. HMGB2 ENSGALG00000010745 156.38 1258.82 high mobility group box 2 [Source:NCBI gene;Acc:396482]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA