Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_anterior_slice_2, section s52.

Sample reads: 124,237. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 3491.86 28110.04
2. MT-CO3 MT-CO3 3258.60 26232.26
3. MT-ND5 MT-ND5 2996.08 24118.93
4. EEF1A EEF1A 1839.68 14809.72
5. MT-CO1 MT-CO1 1830.62 14736.79
6. ENSGALG00000018384 ENSGALG00000018384 1667.83 13426.30
7. gga-mir-3527 gga-mir-3527 1612.61 12981.77
8. MT-ND1 MT-ND1 1531.83 12331.48
9. MT-CYB MT-CYB 1523.18 12261.85
10. gga-mir-3533 ENSGALG00000027736 1484.03 11946.68 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
11. MT-ND4 MT-ND4 1371.11 11037.66
12. GAPDH ENSGALG00000014442 1337.32 10765.64 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
13. NME2 ENSGALG00000002932 959.82 7726.71 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
14. MT-ND2 MT-ND2 946.63 7620.53
15. PPIA ENSGALG00000028600 895.12 7205.86 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
16. MT-ND3 MT-ND3 766.54 6170.77
17. MDK ENSGALG00000008367 711.31 5726.16 midkine [Source:NCBI gene;Acc:423196]
18. RPL5 ENSGALG00000005922 691.94 5570.23 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
19. RPL26 RPL26 590.15 4750.80
20. RPL8 ENSGALG00000016232 587.26 4727.54 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
21. RPS7 ENSGALG00000016392 463.22 3729.00 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
22. RPL15 ENSGALG00000011290 458.27 3689.15 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
23. RPS3 ENSGALG00000017330 446.73 3596.25 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
24. ENO1 ENSGALG00000002377 443.85 3573.06 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
25. CIRBP ENSGALG00000030918 414.59 3337.52 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
26. RPS20 ENSGALG00000014432 414.18 3334.22 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
27. RPL23 ENSGALG00000001634 412.53 3320.93 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
28. RPL7 ENSGALG00000035252 411.70 3314.25 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
29. RPL7A ENSGALG00000003197 400.58 3224.73 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
30. STMN1 ENSGALG00000001475 394.81 3178.28 stathmin 1 [Source:NCBI gene;Acc:396057]
31. ENSGALG00000018386 ENSGALG00000018386 393.16 3165.00
32. RPS6 ENSGALG00000015082 386.56 3111.87 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
33. RPL21 ENSGALG00000027035 377.91 3042.24 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
34. RPL27A ENSGALG00000005948 377.50 3038.94 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
35. EIF4G2 ENSGALG00000005587 377.09 3035.64 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
36. RPS27A ENSGALG00000036790 372.96 3002.39 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
37. TMSB4X ENSGALG00000026383 367.61 2959.32 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
38. RPS10 ENSGALG00000002813 358.54 2886.31 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
39. ATP6V0C ENSGALG00000009229 339.17 2730.37 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
40. RAN ENSGALG00000002569 337.52 2717.09 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
41. HMGN5 ENSGALG00000007131 330.93 2664.04 high mobility group nucleosome binding domain 5, transcript variant X1
42. RPS4 RPS4 329.69 2654.06
43. RPL27 ENSGALG00000002837 321.45 2587.72 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
44. RPS23 ENSGALG00000015617 318.98 2567.84 ribosomal protein S23
45. RPS24 ENSGALG00000004871 302.49 2435.09 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
46. EEF1B2 ENSGALG00000008590 301.26 2425.19 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
47. H3-IX H3-IX 297.96 2398.63
48. RPSA 290.13 2335.59 ribosomal protein SA
49. RPL4 ENSGALG00000007711 283.54 2282.54 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
50. SNRPG ENSGALG00000028409 282.71 2275.86 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
51. RPL6 ENSGALG00000004818 277.77 2236.09 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
52. RPL14 ENSGALG00000043379 277.35 2232.71 ribosomal protein L14
53. RPS15A ENSGALG00000006771 274.47 2209.53 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
54. RPL31 ENSGALG00000016775 269.11 2166.38 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
55. ENSGALG00000028992 ENSGALG00000028992 268.70 2163.08
56. RPS12 ENSGALG00000013990 267.46 2153.10 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
57. RPS3A ENSGALG00000010077 265.81 2139.81 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
58. SLC25A6_1 ENSGALG00000016691 259.63 2090.06 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
59. MEIS2 ENSGALG00000039118 258.81 2083.46 Meis homeobox 2 [Source:NCBI gene;Acc:395588]
60. RPL18A 246.03 1980.58 ribosomal protein L18a
61. EIF1 ENSGALG00000028517 243.97 1964.00 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
62. HMGN2 HMGN2 243.15 1957.40
63. RPL32 ENSGALG00000027142 241.50 1944.11 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
64. RPS11 ENSGALG00000017299 241.09 1940.81 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
65. H2AFZ ENSGALG00000014023 239.44 1927.53 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
66. ATP5G3 238.20 1917.55 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
67. RPS29 ENSGALG00000012229 236.97 1907.65 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
68. RPL23A ENSGALG00000003966 235.73 1897.66 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
69. HNRNPDL ENSGALG00000023199 232.02 1867.80 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
70. RPS16 ENSGALG00000026490 232.02 1867.80 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
71. RPL13 ENSGALG00000006179 229.96 1851.22 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
72. RPLP1 ENSGALG00000030878 228.31 1837.93 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
73. CRHOA CRHOA 223.78 1801.47
74. CALM CALM 222.95 1794.78
75. TPT1 ENSGALG00000028872 222.95 1794.78 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
76. RPL35A ENSGALG00000007611, ENSGALG00000041230 214.71 1728.45 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
77. RPL3 ENSGALG00000012172 213.48 1718.55 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
78. RPS15 ENSGALG00000015195 212.65 1711.87 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
79. ANP32B ENSGALG00000037483 211.42 1701.97 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
80. NONO ENSGALG00000005507 205.65 1655.52 non-POU domain containing octamer binding [Source:NCBI gene;Acc:428701]
81. EIF5A2 ENSGALG00000009309 203.17 1635.55 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
82. ENSGALG00000002696 ENSGALG00000002696 202.76 1632.25
83. BTF3L4 ENSGALG00000010570 199.46 1605.69 basic transcription factor 3 like 4 [Source:NCBI gene;Acc:424638]
84. RPL10A ENSGALG00000002644 196.17 1579.20 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
85. LDHB ENSGALG00000035836 194.93 1569.22 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
86. RPL36 ENSGALG00000000474 193.69 1559.24 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
87. RPL12 ENSGALG00000008806 189.57 1526.07 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
88. FKBP4 ENSGALG00000014331 186.69 1502.88 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
89. RPL38 ENSGALG00000001465 186.69 1502.88 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
90. EIF3F ENSGALG00000005326 185.45 1492.90 eukaryotic translation initiation factor 3 subunit F
91. RPS14 ENSGALG00000004588 184.63 1486.30 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
92. CDK1 ENSGALG00000003085 182.98 1473.02 cyclin dependent kinase 1 [Source:NCBI gene;Acc:396252]
93. RPLP2 ENSGALG00000034811 182.57 1469.72 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
94. RPS8 ENSGALG00000010124 181.33 1459.74 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
95. PRDX1 ENSGALG00000010243 180.92 1456.44 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
96. RPL9 ENSGALG00000000150 180.09 1449.75 ribosomal protein L9 [Source:NCBI gene;Acc:425468]
97. HMGB2 ENSGALG00000010745 178.45 1436.55 high mobility group box 2 [Source:NCBI gene;Acc:396482]
98. HMGB1 ENSGALG00000042875 177.62 1429.87 high mobility group box 1 [Source:NCBI gene;Acc:395724]
99. ALDH1A2 ENSGALG00000004270 177.21 1426.57 aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
100. MIF ENSGALG00000006326 176.39 1419.97 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA