Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Chicken_E3_anterior_slice_2, section s50.

Sample reads: 124,245. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 5509.34 44347.22
2. MT-ND5 MT-ND5 4785.60 38521.50
3. MT-CO3 MT-CO3 3899.75 31390.89
4. MT-ND4 MT-ND4 2574.92 20726.72
5. MT-ND1 MT-ND1 2491.76 20057.33
6. MT-CYB MT-CYB 2359.11 18989.57
7. gga-mir-3527 gga-mir-3527 2111.20 16994.02
8. EEF1A EEF1A 1920.66 15460.28
9. gga-mir-3533 ENSGALG00000027736 1885.92 15180.64 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
10. MT-CO1 MT-CO1 1863.29 14998.48
11. MT-ND3 MT-ND3 1274.30 10257.43
12. GAPDH ENSGALG00000014442 1136.92 9151.59 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
13. NME2 ENSGALG00000002932 953.75 7677.17 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
14. RPL5 ENSGALG00000005922 802.69 6461.22 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
15. MDK ENSGALG00000008367 800.58 6444.24 midkine [Source:NCBI gene;Acc:423196]
16. PPIA ENSGALG00000028600 713.73 5745.14 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
17. MT-ND2 MT-ND2 684.79 5512.19
18. RPL26 RPL26 566.88 4563.08
19. RPL15 ENSGALG00000011290 512.67 4126.72 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
20. RPL8 ENSGALG00000016232 497.93 4008.07 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
21. RPS3 ENSGALG00000017330 492.14 3961.46 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
22. ENSGALG00000018384 ENSGALG00000018384 488.46 3931.84
23. CIRBP ENSGALG00000030918 472.67 3804.74 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
24. RPS7 ENSGALG00000016392 430.56 3465.78 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
25. ENO1 ENSGALG00000002377 425.82 3427.62 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
26. TMSB4X ENSGALG00000026383 406.87 3275.08 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
27. STMN1 ENSGALG00000001475 392.13 3156.44 stathmin 1 [Source:NCBI gene;Acc:396057]
28. RPL27A ENSGALG00000005948 381.61 3071.76 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
29. RPS10 ENSGALG00000002813 372.13 2995.45 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
30. RPS27A ENSGALG00000036790 364.76 2936.12 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
31. RPL7 ENSGALG00000035252 363.18 2923.40 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
32. RPL31 ENSGALG00000016775 353.18 2842.91 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
33. RPL7A ENSGALG00000003197 352.66 2838.72 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
34. EIF4G2 ENSGALG00000005587 349.50 2813.29 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
35. RPL23 ENSGALG00000001634 348.45 2804.83 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
36. RPS20 ENSGALG00000014432 347.39 2796.30 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
37. RPS23 ENSGALG00000015617 337.92 2720.07 ribosomal protein S23
38. RPS6 ENSGALG00000015082 337.39 2715.81 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
39. RPL21 ENSGALG00000027035 334.76 2694.64 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
40. ENSGALG00000028992 ENSGALG00000028992 328.44 2643.77
41. RAN ENSGALG00000002569 317.92 2559.08 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
42. RPL27 ENSGALG00000002837 316.86 2550.55 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
43. RPL4 ENSGALG00000007711 304.23 2448.89 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
44. RPS3A ENSGALG00000010077 303.71 2444.70 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
45. ATP6V0C ENSGALG00000009229 296.86 2389.56 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
46. RPS15A ENSGALG00000006771 296.86 2389.56 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
47. RPSA 292.13 2351.49 ribosomal protein SA
48. RPS24 ENSGALG00000004871 287.39 2313.33 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
49. RPL6 ENSGALG00000004818 279.49 2249.74 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
50. RPS4 RPS4 268.44 2160.80
51. HMGN5 ENSGALG00000007131 265.81 2139.63 high mobility group nucleosome binding domain 5, transcript variant X1
52. MEIS2 ENSGALG00000039118 263.18 2118.46 Meis homeobox 2 [Source:NCBI gene;Acc:395588]
53. RPL13 ENSGALG00000006179 262.65 2114.19 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
54. H3-IX H3-IX 261.60 2105.74
55. SLC25A6_1 ENSGALG00000016691 260.02 2093.02 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
56. EEF1B2 ENSGALG00000008590 257.39 2071.85 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
57. RPL14 ENSGALG00000043379 257.39 2071.85 ribosomal protein L14
58. RPS16 ENSGALG00000026490 248.97 2004.07 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
59. HNRNPDL ENSGALG00000023199 237.39 1910.86 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
60. RPS12 ENSGALG00000013990 237.39 1910.86 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
61. SNRPG ENSGALG00000028409 237.39 1910.86 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
62. RPL32 ENSGALG00000027142 235.28 1893.88 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
63. ALDH1A2 ENSGALG00000004270 234.23 1885.43 aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
64. RPS29 ENSGALG00000012229 229.49 1847.27 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
65. RPL36 ENSGALG00000000474 223.70 1800.66 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
66. CALM CALM 220.54 1775.23
67. PRDX1 ENSGALG00000010243 215.80 1737.07 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
68. FKBP4 ENSGALG00000014331 211.59 1703.19 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
69. RPL38 ENSGALG00000001465 211.07 1699.00 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
70. TPT1 ENSGALG00000028872 210.01 1690.47 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
71. RPL23A ENSGALG00000003966 209.49 1686.28 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
72. ENSGALG00000018386 ENSGALG00000018386 207.91 1673.56
73. RPS14 ENSGALG00000004588 207.38 1669.30 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
74. RPLP1 ENSGALG00000030878 204.75 1648.13 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
75. EIF1 ENSGALG00000028517 204.23 1643.94 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
76. H2AFZ ENSGALG00000014023 203.17 1635.41 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
77. HMGN2 HMGN2 200.01 1609.97
78. BTF3L4 ENSGALG00000010570 197.91 1593.07 basic transcription factor 3 like 4 [Source:NCBI gene;Acc:424638]
79. CRHOA CRHOA 195.28 1571.90
80. RPS11 ENSGALG00000017299 195.28 1571.90 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
81. ANP32B ENSGALG00000037483 194.22 1563.37 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
82. ATP5G3 193.70 1559.18 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
83. LDHB ENSGALG00000035836 193.70 1559.18 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
84. ENSGALG00000002696 ENSGALG00000002696 192.12 1546.46
85. RPL35A ENSGALG00000007611, ENSGALG00000041230 188.43 1516.76 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
86. RPS15 ENSGALG00000015195 186.33 1499.86 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
87. RPL3 ENSGALG00000012172 185.28 1491.40 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
88. NONO ENSGALG00000005507 183.70 1478.69 non-POU domain containing octamer binding [Source:NCBI gene;Acc:428701]
89. EIF3F ENSGALG00000005326 181.59 1461.70 eukaryotic translation initiation factor 3 subunit F
90. RPL18A 181.07 1457.52 ribosomal protein L18a
91. RPS8 ENSGALG00000010124 180.01 1448.98 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
92. MIF ENSGALG00000006326 178.96 1440.53 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
93. RPL12 ENSGALG00000008806 176.85 1423.55 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
94. RPL37A ENSGALG00000011472 176.85 1423.55 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
95. RPL10A ENSGALG00000002644 172.64 1389.66 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
96. RPL9 ENSGALG00000000150 172.64 1389.66 ribosomal protein L9 [Source:NCBI gene;Acc:425468]
97. CDK1 ENSGALG00000003085 168.43 1355.77 cyclin dependent kinase 1 [Source:NCBI gene;Acc:396252]
98. HSPA8 ENSGALG00000006512 165.27 1330.33 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
99. HMGB2 ENSGALG00000010745 164.75 1326.15 high mobility group box 2 [Source:NCBI gene;Acc:396482]
100. KPNA2 ENSGALG00000003584 164.75 1326.15 karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA